Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------ARR14(2)                    --------->ARR14(2)               <------NtERF2              <---------RAP2.6(3)              ------>NtERF2              <------NtERF2             --------->RAP2.3(2)             --------->RAP2.3(3)             --------->DEAR3(1)             --------->ATERF1(2)             <---------ATERF1(2)             --------->ANAC58             --------->ANAC58             --------->DREB2C(2)             --------->RRTF1(2)             --------->RAP2.6(2)            --------->ERF1            --------->SPL7            --------->RAP2.3(1)            --------->ATERF1(1)           --------->DREB2C(1)           <------NtERF2           --------->ATERF1(1)           <---------ATERF1(1)           <---------DREB2C(1)           ------>NtERF2                                                       <---------ANAC46          <---------ATERF1(1)                                         <------ZmHOX2a(1)          --------->DEAR3(1)                                         <----------ID1         <------NtERF2                                       <---------------AGL15              <----         --------->ATERF1(1)                                 --------------->AGL15         ------>NtERF2         <---------RAP2.6(2)                                <-----------------AGL3    <---------WOX13(1)     <-----------HVH21                                      <-----------------AGL2  --------->ATHB12    <-----------RAV1(1)                                     ----------------->AGL3 <---------YAB1 -->GT1 <---------LBD16             <---------WRKY18(1)  <----------DOF2    --------->ALFIN1 <-------   aaactcttgtcgcggccgccaagttctggtctcgttcttgactgcttcaaacaaactctctttctacatataggacaagtggagtttgattgcagccagg  4778000                                                                                                   --                                                                                                <----                                                                                                -----                                                                                    --------->ANAC58                                    <------NtERF2                              --------->MYB52(1)  <-                               --------->At4g35610                <---------At4g35610         <------ZmHOX2a(1)                               --------->ZAT2                     <---------ZAT2    --------->ANAC58                               <---------ZAT2                     --------->ZAT2 --------->ANAC46  -- --ZmHOX2a(1)                  <---------At4g35610   ---------->ID1    --------->LBD16     --------->HSFB2a(2) ----RAV1(2)            --------->YAB1           <----------DOF2  --------->At4g35610      <---------HSFB2a(2)   agtctatacattcaacgtgaaaccagtgatcacagctcggcaaaaccctagctttgtctccatcggctagctccgagagacaaacgacgcattcgaggac  4778100                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                    ------->MYC2                                                                    <-------MYC2                                                                    <-------MYC3                                                                    ------->MYC3                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                 <---------ALFIN1          ----------                                                              <---------ETT(1)           <---------bZIP60(1) ------->ARR14(2)                                      ============================================bZIP_DOF -----ANAC55(2)                                --------->ANAC58>>>>>>>>>>DREB1A          <---------TGA1a ---->ANAC55(2)                     ------>ZmHOX2a(2)  <----------DOF2 --------->MYB52(2)--------->bZIP60(1) --------ARR14(2)         <---------YAB1------>ZmHOX2a(2)    --------->DEAR3(2)     <---------At4g35610 ----->TEIL               --------->ANAC46     --------->ANAC58>>>>>>>>>>DREB2A     --------->At4g35610   gtatttgaagtctttggtattgaagtctacgatagggatcgatcgtagaacgtaaggctttataccgacacgttccttgatggtgatgctgacatgacca  4778200                            <---------ICU4                         --------->YAB1                         <---------ICU4                      <---------ICU4                      --------->YAB1                     <---------YAB1                    <---------ARR11(3)                    --------->ARR11(3)                                    --------->GLK1(1)                   --------->YAB1                                         <---------GLK1(1)                  <---------YAB1                          ------->GAMYB <------NtERF2                  --------->ICU4                         <---------MYB52(2)                <---------ICU4                          --------->At4g35610                --------->YAB1<---------YAB1     --------->ICU4        --------->RAP2.6(2)               <---------YAB1 --------->ICU4     <---------ATHB12    <---------------------WRI1              <---------ARR11(3)     --------->YAB1     <---------At4g35610     ---------->DOF2              --------->ARR11(3)    <---------YAB1-------->HAHB4    --------->DEAR3(1)             --------->YAB1 --------->YAB1      <---------TOE2(3)  --------->ANAC58            --------->ICU4 <---------YAB1     --------->AHL20(2)   --------->ANAC58            <---------YAB1 --------->ICU4     <---------AHL20(2)   --------->ANAC46       ---------->DOF2 ->HVH21  --------->YAB1<---------YAB1       --------->AHL20(2)  <---------ALFIN1     ---------->DOF2   tcgttgttgttgtcatgatcatgatcatcatcatgagtattataacatttaatgatgcaactcactaccacggccgaaatcccaaagaaaaagaaagcga  4778300                                                     --------->HSFB2a(2)                --------->ANAC58                                                     <---------HSFB2a(2) --------->ARR11(3)                      --------->YAB1   --------->ARR14(2)   <----------DOF2             --------->ANAC58             --------->LBD16           <---------ARR14(2)   <---------DAG2<------ZmHOX2a(2)       <---------AHL20(2)              <---------GLK1(2) <-----------GT1 <---------ARR11(3)   agacaatatttattccgagatgtattagaatgacagcatcggattctttcatcttctataaacttttttgaagaagatcaaactctcagtaagaaaccaa  4778400                                                                   ----------->GT1                                                                   <---------ANAC55(2)                                                                  <---------TOE2(3)                                                     --------->ANAC55(2)                                          <---------AHL20(2)     --------->MYB52(1)                                          --------->AHL20(2)     <-----------GT1                                          <---------AHL20(1)  --------->YAB1                 <---------At4g35610   ------>MYB46(1)     --------->YAB1              ---------->DOF2        --------->TOE2(3)   <-----------TBP       <------MYB83  <---------MYB52(1)------>MYB83 <---------TOE2(3)       <------MYB46(1)  <---------At4g35610         --------->MYB59--------->ANAC55(2)       <-------      <---------MYB46(3)--------->At4g35610<---------AHL20(2)<---------YAB1              --------->YAB1      --------->MYB111(1)            <---------MYB59<---------TOE1(3)                ----------->GT1   aaacacagttggtagagaaagctgttagctaattccaaacctaattaatttgtttaggtatttataataacgtaacaaaaatccatctcgataaaaattg  4778500                               <---------------AGL15          --------->YAB1                               <----------DOF2      ----------->GT1        <-----------GT1     --------->GLK1(2)    --------->CCA1(2)   --------->CCA1(2)              <     <---------ICU4  <---------YAB1             --------->ARR11(3)  <---------ARR11(3)              -     <---------GLK1(2)     <---------GLK1(2)    <---------ARR11(3)  --------->ARR11(3)      ------>ZmHOX2a(1)  --------->YAB1    <-----------TBP      ------->TEIL      <---------ICU4             --------->At4g35610 -----CBF        <---------AHL20(2)   --------->ANAC55(2)------------>CBF      ------------>CBF -----   ggaataagaatttccatattttttttatagattcttttatatgtaactgagatatagttaacaatgacaagatttagagattacaatctgcttcctagta  4778600                                                                     --------->YAB1                                                                --------->ATHB51                                                                <---------ICU4                                                                <--------ATHB1                                                                <---------AHL20(2)                                                                --------->AHL20(2)                 --                                                               <---------YAB1                      <-         <------------CBF                               ----------->GT1            <---------AHL20(2)     --------->bZIP60(2)                                <---------ANAC58           --------->AHL20(2)     --------->ANAC58                      <----------DOF2     --------->ICU4 --------->AHL20(2)  <--     ----------->HVH21                  ---------->ID1  <---------ANAC58      <---------AHL20(2)  ---     --------->ANAC58          <----------DOF2          <XXXXXXXXXXXXXXXXXXXXMIR400--------->AHL20(1)     --------->ANAC46      ------>ZmHOX2a(1)       <-----------RAV1(1) <---------YAB1   --------->AHL20(2) ---------------AtSPL8     <------------------------ANAC81   --------->YAB1--------->AHL20(2)   ----- -------->ANAC46   <---------ANAC58     <-----------GT1 <---------ANAC46--------->YAB1 --------->AHL20(2) ---->YAB1         <---------ANAC58    <-----------GT1  <---------ANAC55(1)--------->YAB1  --------->AHL20(2)   ataaggcacgacattgtgaaggcgttttcctctcttttttttttcctttttttttgtggcgtataataatttcataataaaaaaataaaataaaaaaatc  4778700                                           --------->ATHB12                                       --------->ALFIN1                                      <-------MYC3                                      <-------MYC2                                      ------->MYC2                                      <-------MYC4                                      ------->MYC4                                      ------->MYC3                                      <---------ARR14(2)                                     <---------ANAC55(2)                                --------->ARR14(2)                                     ================================bZIP_DOF        --------->HSFB2a(2)                                     --------->ANAC55(2)                             <---------HSFB2a(2)         --------->At4g35610         ================================bZIP_DOF   <---------DAG2         <---------At4g35610         <---------O2                               <----------DOF2       <-----------RAV1(2)           <---------TGA1a                    ----------->HVH21       <---- ------->ATHB51                      --------->O2                     --------->At4g35610      <----- --------ICU4                        --------->TGA1a       <---------TOE2(3)  ------->TEIL     <----- -------YAB1               --------->GLK1(1)            <---------YAB1<---------At4g35610<------ZmHOX2a(2) ------>ICU4   ----------->GT1      ------------>OsbHLH66 ---------->DOF2--------->MYB52(1)<---------ALFIN1 ---->YAB1 <---------YAB1  <---------GLK1(1)    <-----------HVH21  ---------->DOF2  <-----------GT1   ataatttgatcagatgatagtaaattcagatttctgaacacgtgttgatttgtcagtgattaaagattgtaaagctgacgaacttttctcgatccacagc  4778800                                          <---------ICU4                                     --------->AHL20(2)                                     <---------AHL20(2)                           <---------------AtSPL8                                   <---------YAB1                                <---------ZAT14                                 <---------ICU4                                  --------->ZAT14                                --------->ICU4                                  --------->ALFIN1        <----------DOF2         <---------YAB1                              <---------At5g28300       <---------ANAC58       --------->YAB1                        --------->WOX13(1)<---------ZAT14       <---------ANAC58       <---------ICU4                       --------->AHL20(2) --------->ZAT14 -----GLK1(2)<---------YAB1   <--------HAHB4                       <---------AHL20(2) --------->ZAT18 ----At4g35610               <---------YAB1         <---------TOE2(3)      --------->MYB52(1) ----ZAT2 <---------YAB1     --------->ICU4<----------DOF2        --------->AHL20(2)  <---------ZAT18   ttctgttttgctttgattattttgtttcttcatcattattttaatctttagtttgatgtattgacaaaattaatcacttacggtgtagtacactgaaatt  4778900  Previous    Next  AGI:  At3g14320.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to Putative RING-H2 finger protein ATL3E (ATL3E) [Arabidopsis Thaliana] (GB:Q9LUL6); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G53820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79606.1); similar to Avr9/Cf-9 rapidly elicited protein 132 [Nicotiana tabacum] (GB:AAG43550.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 4777738    to: 4778352    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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