Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->TOE1(3)                            --------->TOE2(3)                  <---------ARR14(2)                  --------->ARR14(2)                                             --------->ARR14(2)                 <------NtERF2                                                   <---------ARR14(2)          <---------AtLEC2 <---------ANAC46                                    --------->DEAR3(1)   --------->MYB46(3)     <-----------------------TaNAC69(2)                  <------NtERF2 ------>LBD16   --------->LBD16       <------ZmHOX2a(2)                  ---------->CDC5 ---------HVH21<---------ANAC46  --------->ZAT6      --------->MYB52(1) ---------->DOF2            -- ----->ANAC46 <---------LBD16--------->DOF5.7(2)    ----------->HVH21--------->ZAT6              <---   cgtcaacaacttccatggcggaaacagtttcgttaacacgatcaatagcgaggtctaacagatgttcgcaaacactaagcgccgatttgagtccctcatc  4769500                                                                                                  <--                                                                                               <-----                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(2)                       --------->At5g28300                                                --------->ARR14(2)              <---------ZAT2                                                            --------->LBD16          <---------At4g35610              <---------ANAC58                            --------->HSFB2a(2)  <---------CCA1(2)   --------->HSFB2a(2)  <---------ANAC58     ---------->DOF2       <---------LBD16 ------->SPL7 <---------At4g35610--------->ATHB12     --------->YAB1             <-----------GT1<---- ------SPL7 <---------ZAT18   --------->MYB52(1)  <<<<<<<<<WRKY18   ---------->DOF2--------->MYB46(3)   gtccgtctcttcagcgagcttcttcggtaactcaacgattgagttgagttcgtcaatgacaacttgtaaagaaagcctgaatataacctccggatccgtc  4769600                                                                                         <---------WRKY38(1)                                                                                   --------->LBD16                                                                                   ------>NtERF2                        <---------ANAC58                    <---------ALFIN1      <---------ANAC46                        <---------ANAC58                   --------->ZAT14       <------NtERF2                  --------->HSFB2a(2)                  --------->ANAC58          <---------LBD16-----             --------->HSFC1(2)                        --------->ANAC46         <---------DEAR4(2)             <---------HSFC1(2)--------->ANAC58        --------->ANAC58         <---------RAP2.3(1)             <---------HSFB2a(1)                       <---------ANAC55(2)     <---------RAP2.3(2)             --------->HSFB2a(1)            --------->At5g28300         <---------ANAC46 <---------WRKY12             --------->At4g35610   --------->ANAC58    --------->ANAC55(2) <---------ZAT14    <------ ---------RAV1(1) <---------HSFB2a(2)      ----------->GT1 <---------REM1(2)   <---------DEAR3(1) ----MYB52(1)<---------At4g35610   --------->ANAC58  <-----------GT1  <---------YAB1<------NtERF2 -----ANAC46 <---------ZAT2    --------->ANAC58 --------->ICU4--------->ANAC46<---------At4g35610 ---   gtgttggacaatggaagcttcgagatgcttgagaagcaagaaacagggtaattagttacgctacacacagttttgagtgaagcggcgggagtcaactcgg  4769700                                        --------->At5g28300                                      <---------DEAR3(1)                                  <---------LBD16               <---------ZAT2                   <---                                <---------ARR14(2)              --------->At4g35610             -----                               <----------DOF2                  <---------At4g35610             <----                              <---------DAG2                --------->ALFIN1    ------>NtERF2--------                              <----------DOF2            <---------DEAR3(1)     ----------->RAV1(1)                             <---------ANAC58            <---------DREB2C(2)   --------->DEAR3(1)----  --------->ZAT14   <---------ANAC46------>NtERF2        <---------ANAC46   --------->ANAC46 --------  <---------ZAT14   ----------->GT1 --------->LBD16   ----------->HVH21  <---------ICU4      -------- ---->LBD16        --------->ALFIN1<---------RAP2.6(2)----------->TGA1  <---------YAB1      <-------- ---LBD16 --------->ALFIN1   <---------ANAC58       <---------MYB46(3)--------->YAB1 <---------ARR14(2) --->NtERF2   <---------MYB46(3)--------->ARR14(2) <---------AtMYB61 <---------YAB1  --------->ARR14(2)   ggactgaactcggtgttggatgtggtgaattgcctttccggctgtgaattgcgatggtgacggtggagctgatgataatcgccaccagaactgccacgga  4769800                                             <---------ARR11(3)                                             <---------ARR14(2) ------GLK1(1)                               --------->ARR14(2)                          ----------->HVH21 ---->ARR14(2)                               --------->ARR11(3)                        <---------ANAC58 -----ARR14(2)                               <---------ARR11(1)                        >>>>>>>>>>WRKY18 ->ANAC46                               ------->GAMYB                                  <---------ANAC58 ----->GLK1(1)                         --------->ANAC58                            <---------WOX13(1) ->ANAC58                              --------->ANAC46    <---------WRKY12      --------->ATHB12  -- ->ANAC58                   <----------DOF2 <---------CCA1(2)  <----------DOF2  <---------YAB1  <---- -LBD16            <----------DOF2     --------->ANAC58 <---------ANAC46   <----------DOF2      -----   aatgcctatttgatacaaacgctttctcgtctttctcttcaacgccaaatcttgagtttcgtcaactttgccatagcctttgttgattgacttgacagta  4769900         --------->TOE1(3)            <---------ANAC58                                   <-------GAMYB         --------->TOE2(3)            <---------ANAC58                          --------->bZIP60(1) ------->WOX13(1)                     <---------ANAC46                          <---------bZIP60(1) < -----ARR14(2)                  <---------YAB1              --------->YAB1 <------------CBF<---------YAB1 ---->ARR14(2)            ----------->GT1        <---------ANAC46   <------------CBF    --------->ALFIN1   tccatcaaaaaccctaactcggtttctagggtttatatttgtgtgtgtgtgtcttagaacaagaatgaagaattggttattgatgtcagtgtgttgatag  4770000                                                                              <---------At4g35610                                                                           --------->REM1(2)        <                                                                      --------->ALFIN1              -                                         <---------ANAC46         <------ZmHOX2a(1)              <---                                 <---------TOE2(3)                =========================HOX2a_HOX2a                                --------->MYB52(1)              <---------TOE1(3)         <---------YAB1                                <---------DOF5.7(2)       <---------------AGL15          --------->AHL20(2)                          <---------AHL20(2)              --------------->AGL15     ------>ZmHOX2a(2)                          --------->AHL20(2)  --------->KAN4(2) <---------TOE2(3)   ================= -----------TBP ----------->GT1 <-----------GT1     <-----------RAV1(1) <---------ANAC46 <---------AHL20(2)   ttttatataagtagtggaatgtgaatatttaaattaacgtctcgcgtttattctctggtgcttcttaaggaagtgtgtgtagatgatcgattaaaattag  4770100                                                    <---------ANAC55(2)                                                    --------->ANAC55(1)                <---------YAB1                                                    --------->ANAC46                 --------->YAB1                                                    <---------ANAC58        --------->AHL20(2)                                                    --------->ANAC58        <---------AHL20(2)                                        --------->ARR11(3)                 <---------AHL20(2)                                        <---------ARR11(3)              <---------AHL20(2)          <-------TEIL                <---------YAB1<---------ANAC58    --------->AHL20(2)         <-     <---------TOE2(3)              --------->YAB1  --------->ANAC58   <---------AHL20(1)        ---- ---------ZAT6                 <---------AHL20(2)   <---------ANAC55(1)--------->AHL20(2)        ---- -------->ALFIN1            ----------->GT1    ------>ZmHOX2a(1)--------->ZAT6    --------->WOX13(1) ---ZmHOX2a(1)          --------->ZAT6--------->ICU4--------->ANAC55(2)<---------AHL20(2)        <--- ===HOX2a_HOX2a       <-----------HVH21--------->YAB1         <-----------HVH21 ------------>CBF <---   gagtgttgacgatacatcatgttctgtcactagttaattcatgatcatcctcttacgtaatttctgtcactaattaatttatatcaatcttcattaagaa  4770200                                                      --------->ARR14(2)                                                      --------->KAN4(2)                                                      <---------ARR14(2)     --------->ARR14(2)                             --------->ARR14(2)     <---------ARR14(2)                             <---------KAN4(2)    <---------MYB52(1)                    <---------YAB1  <---------ANAC58                      --------->ATHB12       ----------->GT1  <---------ANAC58                     --------->ICU4--------->HSFB2a(1)                            < ----------GT1--------->YAB1         <---------ANAC58<---------HSFB2a(1)                            < ----->HSFC1(2)                      <---------AtLEC2<----------TaMYB80                          <--- ----->HSFB2a(1)            --------->AHL20(2)      ---------->TaMYB80                <---------ANAC58 ------HSFB2a(1)        <---------YAB1 <---------YAB1<---------KAN4(1)           ------->TEIL<------- ------HSFC1(2) <---------At4g35610  <---------ANAC58--------->KAN4(1) --------->YAB1 <---------ANAC58   gtttccgtttctgtattcatcagattgtaattgaatattgcatgattaatgcagaatattcgacctggtttaataaaaacatgaatttgggtgctacttg  4770300                                                                 <-----------GT1                                                               <-----------GT1                                                            <---------AHL20(1)                                                            --------->ARR11(3)                                                            <---------ARR11(3)       <-----------GT1                                      <---------ICU4     -------->HAHB4                                         --------->AHL20(1)     --------->YAB1                                        --------->ICU4  --------->YAB1                                      ----------->GT1 ---------WOX13(1)                                   <---------TOE2(3)              ------->TEIL ---------YAB1                                      ---------->DOF2         <-------TEIL ------YAB1                                        <---------AHL20(2)  --------->HSFB2a(2) --ANAC46                                         <---------AHL20(2)   <---------HSFB2a(2)        <--   tgattaataatacaatactagtttcaagttttaagtccaaatgtttgtctaatttaaagtaatattttcacttctaggcacatatgtacttactagagag  4770400  Previous    Next  AGI:  At3g14300.1    Description:  ATPMEPCRC; pectinesterase. similar to ATPME1 (Arabidopsis thaliana pectin methylesterase 1), pectinesterase [Arabidopsis thaliana] (TAIR:AT1G53840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45545.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 4766912    to: 4769905    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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