Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <-----------HVH21                                            ------>ZmHOX2a(1)                             --------->ARR11(3)                                                     -                             <---------ARR11(3)                                                    <-                             <---------ARR14(2)                                                    --                             --------->ARR14(2)                                                   ---              --------->ALFIN1             --------->TOE2(3)                                      <--  --------->ATHB12          <------ZmHOX2a(1)        <-----------GT1                              <-- <---------YAB1      <---------WRKY38(1)   --------->TOE1(3)                                      <-- ------->P    <-----------RAV1(1)       <---------ARR11(1)                 ----------->HVH21      --- ----->At4g35610     <---------WRKY12   <---------ARR14(2)           --------->At4g35610         <--- ----->HSFC1(2)    <---------PCF2       --------->ARR14(2)        <---------YAB1                 <--- ------HSFC1(2) --------->ALFIN1       <---------CCA1(2)        --------->YAB1        ------>ZmHOX2a(2)   gctaccattggactctgtgtgggacaacgaggaccttcatcgtatccttcacatataacctctccattatcatctgtgtaacagatgatcccttgtatcg  4762000 ----->ZmHOX2a(2) -----ZmHOX2a(2) ------->GLK1(1) ------>ARR11(3)                                                                       <---------ALFIN1 -------ARR11(3)                                                                      ------>ZmHOX2a(2) -------ARR11(1)                                                                      =============== -------ARR14(2)                                   ------>MYB83                   <---------YAB1 ------>ARR14(2)  --------->ANAC58            <-----------GT1                   --------->YAB1  ===== ------CCA1(2)    --------->ANAC58    --------->YAB1       <---------ANAC46     <---------ICU4  <---- ------ARR14(1)   --------->ANAC46   <-------TEIL  ------>MYB46(1)             --------->ICU4 <------   gatcttcaaaaacctgttccaagaaaaacaatttcaacattcatatttttaccaaatggttgtgtctgaattttcaagaaaattatgatccactctaagg  4762100                                                    <----------CDC5                                                   ----------->RAV1(2)                                                   ============================RAV                                                   --------->At4g35610                                                   <---------At4g35610                                                 ------>ZmHOX2a(2)          <---------ANAC58                                          --------->GLK1(2)              <----------DOF2      --------->DAG2                      <-----------ARR10             <---------ANAC58     ---------->DOF2------>ZmHOX2a(2)     --------->ARR14(2)            <---------ANAC58 ==HOX2a_HOX2a    <---------ARR11(3)      <---------ARR14(2)       <-----------RAV1(1) ==========================HOX2a_HOX2a <---------ANAC58      ----------->HVH21 --ZmHOX2a(1)     --------->ARR11(3)   <---------ANAC58     --------->At5g28300   <----------DOF2 ---TOE2(3)   <---------At4g35610      <---------ANAC46    ----------->GT1  <---------ANAC58------->TEIL   agaaacaaaaagagagagatgatcttacaatgttcttggtggagtatctgatcggctgaggctgtgaaactgtggctttcttgactttaacatgaacttg  4762200             ---------->DOF2                                         --------->DAG2    <---------REM1(1)                                               ---------->DOF2  <-------GAMYB                                                   --------->ARR11(3) <-----------RAV1(1)              <----------DOF2             <------ZmHOX2a(1)              <-------   actctgttgaagcatcaaagtctttgctcttactgtctttggaacaaaacatggtgttttaagaggaagataaagtttagttgaatatgccatagctttt  4762300                                                                                              -------               <---------HSFB2a(2)                                                           <-------               --------->HSFB2a(2)                     ----------->GT1                       <-------            <---------------AGL15                      <------MYB46(1)             <---------YAB1 ---            --------------->AGL15    <----------DOF2   <------MYB83              --------->AHL20(2) <    <----------DOF2            ------>ZmHOX2a(2)      <---------AtMYB61          --------->YAB1 <---- ---DOF2<----------DOF2      --------->ARR11(3)     <---------MYB52(1)    ----------->GT1  <---------At4g35610   gtgtttctttctttcttcaagaagaaactttgatctcttctttttggacaactcgtttggtttatagttctcagagaagaaaattataaattccgatgat  4762400                        <---------AHL20(2)                      <---------RVE1(1)          --------->ANAC46    ------->TEIL      <---------CCA1(1)          --------->ANAC58  *TSS               <---------GLK1(2)           --------->ANAC58 -->ATHB12           --------->ARR11(3)  <-----------TBP --ATHB12    <---------AHL20(2)        <---------AHL20(2)                ------------>CBF --YAB1      --------->AHL20(2)        --------->AHL20(2)           --------->YAB1 ------>ATHB12       <---------ARR11(3)--------->YAB1             --------->AHL20(2)   --------->WOX13(1) ---------WOX13(1) <---------TOE2(3)--------->WOX13(1)         --------->AHL20(2)    ------------>CBF -----WOX13(1)     <---------YAB1 ------------>CBF         ----------->GT1    --------->YAB1   tgattgaatctgagtttaattaagatttttttttaagtcaattatatatagacgcaaggtgaagataaaataatagccaataagagtggcaatctcatta  4762500                               --------->MYB52(2)                               ----------->ARR10                             <--------P                             <---------MYB52(1)                  <---------LBD16                 <---------ANAC58                 <---------ANAC46   --------------->AGL15            <----------DOF2<------MYB83                       <---------ANAC46      <-------GAMYB        <------MYB46(1)                    <---------ANAC58      <---------ANAC58     <---------MYB46(3)                 <---------ANAC58      <---------ANAC58    --------->MYB59                    <---------TOE1(2)     <------MYB83<---------ANAC58  <-----------------AGL3    <---------TOE2(2)     <---------MYB46(3)   <---------AtMYB61          <-----------GT1             --------->TOE2(3)     <------MYB46(1)  <---------ANAC58          <---------ANAC46                --------->ANAC58    <---------AtMYB61 <---------ANAC46          <---------ANAC58                --------->ANAC58    --------->MYB59   <---------ANAC58          <---------ANAC58               ------->TEIL   acaagtttggttgtctttttcgtggggtttggttagttcttctaatggtttcgtttttcttcttacgtttgatttttgatgaacgtcaatgtgaaatcgt  4762600                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                       -------->ATHB1                                                                       --------->ATHB12        ------                                            <---------AHL20(2)      --------------->AGL15     <------                <-------TEIL                <---------YAB1         <-----------------AGL3     <------    --------->ARR11(3)             --------->At4g35610     <---------YAB1      --------->GLK1(1)    <---------ARR11(3)             <---------ANAC46--------->TOE2(3)<---------------AGL15    <-------   <---------CCA1(2)           <-----------HVH21  <---------ANAC55(2) <---------YAB1       --------->DOF5.7(2)  --------->ARR11(3)    ------->TEIL       <---------AHL20(2)      <-----------------AGL2  <---------MYB52(1)  <---------AHL20(1)<-------MYC3   <---------At4g35610    --------->AHL20(2)   <---------GLK1(1)  <---------ARR11(3)------->MYC3 <-----------RAV1(2) --------->AHL20(2)--------->ATHB51   <-------GAMYB   tgaatatatctacacatatacatgtgtatgtctagtcaggtgtatttttattacataaatttttataaaactattattgggatttcttactccgttaatg  4762700      <---------ICU4     <---------AHL20(1)                                                                   --------->AHL20(2)     --------->AHL20(1)                                                        <----------DOF2 --->ICU4                            --------->ZAT6                         --------->GLK1(2) ---TOE1(3)                  --------->GLK1(2)                             --------->ARR14(2) ---TOE2(3)                 <---------GLK1(2)                              <---------GLK1(2)    <---- --DOF5.7(2)              ----------->ARR10<---------YAB1            <-----------GT1    --------->AHL20(2)   tttaaaaaatattactaagaaaactacttagattctgtaacacttatatttgagaaacaaaatgagttttataacccgattctttgacaaaataatatga  4762800                                                                --------------->AGL15                                                                <---------MYB59  <---------ARR11(3)                                                               <-----------------AG                     ------->GAMYB                             <-----------------AGL1                   --------->At4g35610                         ----------------->AGL2                  --------->MYB52(1)                           ----------------->AGL1                 <---------ALFIN1                              ----------------->AG                --------->LBD16                             ----------->HVH21    --------->ARR11(3)         <---------ATHB51                                 ----------->RAV1(2)---------->DOF2------>MYB83         <---------ATHB12                             ------>MYB83     ----------->GT1      ------>MYB46(1)         <---------AHL20(2)                           ------>MYB46(1) --------->DAG2   <-----------GT1         --------->AHL20(2)                         <---------MYB59 ---------->DOF2   ----------->HVH21 ------ID1<---------ICU4   ----------->GT1       <-----------GT1<---------------AGL15 --------->WRKY12   gacaaaaacaaataattccccaactgaaatagtttatagacttaagacattttaccttccttctgacctaaaaaggtaaaaaagacatttgaccttccat  4762900  Previous    Next  AGI:  At3g14280.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN62135.1) Range:  from: 4761439    to: 4762402    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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