Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ------>ZmHOX2a(2)                                ===============HOX2a_HOX2a                              --------->ARR11(3)                              <---------ARR11(3)                            <---------YAB1                          --------->YAB1                         <---------YAB1          <---------ANAC58                   --------->AHL20(2)                         --------->ICU4          <---------ANAC58              ------>MYB46(1)                     <---------ANAC46            <---------ANAC46              ------>MYB83                <-----------RAV1(1) <---------ARR11(3)                    --------->ANAC46   --------              <---------At4g35610  <---------CCA1(2)   <---------KAN4(1) <-------TEIL      --------->TOE2(3)    <---------MYB46(3) <---------At4g35610    <---------CCA1(2)<<<<<<<<<CBP60g----------->RAV1(1) <-----------RAV1(1)<---------At4g35610 ------>ZmHOX2a(1)      <<<<<<<<<SARD1--------->AtMYB61   gttttgttgttgattcaactgttgctgatgatgatctatatccttcccatgtcttgaataatccaaatttctacatacaccaacaaaaaaataacttaat  4748400                                                                 <---------CCA1(2)                                         <---------ANAC58   --------->ZAT18                                    --------->ATHB12        <---------ZAT18                                    <---------ICU4        ------->MYC3                                    <--------ATHB1        <-------MYC3                                    -------->HAHB4        --------->TOE1(2)             --------->ANAC58                                   --------->AHL20(2)     <-------MYC2                  --------->ANAC58                                 --------->YAB1 --------->AHL20(2)         --------->ANAC58                         ----------->GT1 <---------AtLEC2 ------->MYC2     <---------ANAC55(2)                    --------->ATHB51--------->ATHB51      ------->MYC4     --------->ANAC46                    <---------ICU4 <---------YAB1         ------->PIF5     --------->ANAC58                    <--------ATHB1 <---------AHL20(2)     <-------PIF5  <---------ETT(2)--------->ANAC46                    --------->YAB1 <---------ATHB51      <---------ANAC58  --------->ANAC55(2)                   <---------ATHB51--------->ICU4        <---------ANAC58--------------->AGL15<------        <----------DOF2  <---------ZAT6  <---------ANAC46--------->HSFB2a(1)    ----------->GT1 ->AHL20(2)        <---------AHL20(2)    <---------ANAC58<---------HSFB2a(1)   --------->DAG2--------   tagttttgaactttgaagtgaataattgtgttaaaaaataattgcatgaaaaaaatggaacgtgcgcatacctgtctacgtaaggtaaacaagacatgac  4748500                                                     ----------->GT1                                                     --------->ANAC58                                                  <---------REM1(2)                                         <---------YAB1  --------->AHL20(2)                                        --------->AHL20(2)                                 ------>NtERF2                                        <---------AHL20(1)                              --------->ABI4(2)                            --------->At4g35610 --------->ETT(2)                        --------->ZAT14                            <---------At4g35610 <---------ETT(2)                        <---------ZAT14                       --------->ANAC58 --------->AHL20(1)                              <---------ZAT18 ---WRKY18(1)          --------->ANAC58 <---------AHL20(2)     <---------YAB1       <---------DEAR3(1) --->HVH21             --------->ANAC46--------->YAB1--------->ANAC58 <----------DOF2  --------->ALFIN1   cggacaaatccatgagataaacttcacgacagctcttagaattataattgtcgacacgataaattatgtttcctttggaatcgaagacggtgcagccatt  4748600                                                                                          <---------MYB46(3)                                                                                          --------->MYB111(2)                                                                                         <--------P                                                                                        <-------GAMYB                                                                                       <---------MYB46(3)                                                                                      <---------AtMYB61                                                                                     <------NtERF2                                                                                    --------->LBD16                                                                                   <---------ANAC46                                                                                   --------->DEAR3(1)                                                                                  <------NtERF2                                                                                  --------->ATERF1(1)                                                                                  --------->RAP2.3(1)                                                                                  <---------LBD16                                                                                 <---------ERF1                                                                                 ------>NtERF2                                                                                 <---------RAP2.3(1)                                                                                 <---------ATERF1(1)                                                                                 <---------RAP2.6(1)                                                                                 <---------RRTF1(1)                                                                                --------->DEAR3(1)                                                                                <---------DEAR3(1)                                                                               --------->RAP2.6(1)                                                                               --------->ERF1                                                                               --------->RRTF1(1)                                                                               --------->RAP2.3(1)                                                             <---------ZAT14   --------->ATERF1(1)                      --------------->AGL15                  --------->ZAT14  <---------RAP2.3(1)                      <---------------AGL15                  <---------ZAT18  <---------ATERF1(1)            --------->MYB46(3)                             --------->At5g28300------>NtERF2       <--           ------>MYB46(1)                                ----------->GT1     --------->LBD16     ---           ------>MYB83                                 <---------ZAT14      --------->ANAC46   <----          --------->MYB52(1)                     <-----------HVH21           <---------DEAR3(1) -----         --------->AtMYB61 ----------->GT1      <---------ETT(2)            <---------LBD16<-------GAMYB   tgtgttgaacaccaacgacttcatccatatagtgaaactctcttgctccgtcgtcaagtacggtgaacttgtttcttctccggcgccggaggttgttaga  4748700                                   <-------TEIL                                  --------->ARR14(1)                                 <---------ARR14(2)                                 --------->ARR14(2)                                 --------->ARR11(1)                                 <---------GLK1(2)                                                  <                               ----------->ARR10                      <---------DEAR3(2)            -      ------->TEIL      <---------ZAT2                              <------NtERF2                   < -------LBD16           --------->At4g35610                       <---------DEAR3(1)   <------------- --->ZmHOX2a(2)         <---------At4g35610                   --------->DAG2       --------->ARR14(2) -----ARR14(2)          --------->ZAT2                      ---------->DOF2        <---------ARR14(2) ---->ARR14(2)         <-----------RAV1(1)             ---------->ID1<---------TOE1(2) --------------   tcgggatgaatcttcaccatagtctctgctggacagattcgatattgccaagtttttgtctcaaaaggtcgtcggtatatttgcatatactatatggaga  4748800                                                                                               <-----                                                                                               <-----                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                   <---------AtMYB61       <---------MYB52(1)                                                          --------->MYB55(2) --------->ATHB12                                                                  <---------MYB46(3) <--------ATHB1                      <------MYB46(1)                             <---------MYB52(1) ---------YAB1            *TSS      --------->MYB59                              <------------CBF -------->ICU4           <---------WOX13(1)    <------------CBF             --------->MYB52(1) <----- ---------ATHB12         <--------P <---------AtMYB61                      --------->MYB46(3)  ------ --AGL15                <-------GAMYB<------MYB83       ---------->DOF2  --------->ANAC46    <------- ->AGL15               <---------MYB46(3)  <---------At4g35610 ----------->GT1  --------->ATHB12    <   caatgattcgttttttttttttttttggttgattcgatttggtcgagctaattggattaaaagtcgggtttatatgcacaaccgattggtggaagttact  4748900                        --------->ANAC58                        --------->ANAC58                        --------->ANAC46                    <-----------GT1 ----ANAC58       <---------AHL20(2)                       --------->AHL20(2)                  ------ ----ANAC55(2)   --------->AHL20(2)                     --------->WOX13(1)                     <----- ----ANAC58      <---------AHL20(2)   <---------YAB1 --------->ANAC58                        <------- --->ANAC55(2)--------->ATHB12      <---------ICU4   --------->ANAC58         <---------AHL20(2)    - ----GT1<---------MYB52(1)         <---------YAB1    --------->ANAC46 <-----------GT1        -------- ----------DOF2 <---------WOX13(1) --------->ICU4  ---------->DOF2  <-----------HVH21------>ZmHOX2a(1)   tactttgttcgtttattgattaatttaagccaacttcatgattattcaatgttcaaagcaattaacttcttgtcacatttttaattcctcgtgtttcaga  4749000                                                 <---------AHL20(2)                                                --------->AHL20(2)                                                <---------AHL20(1)                                            --------->AHL20(2)                                            <---------AHL20(2)                                            <---------YAB1                                        <---------AHL20(2)                                        --------->AHL20(2)                                        --------->YAB1                                       <---------YAB1                                     --------->YAB1                                     --------->ATHB51                                     <--------HAHB4                                     <--------ATHB1              <---------bZIP60(1)                                     -------->HAHB4          ------->MYC3                                    --------->AHL20(2)       <-------MYC3       --------->ZAT6               --------->ICU4         ------->TEIL                    <---------ANAC46 --->At4g35610                      <---------YAB1      <---------YAB1       <---------AHL20(2) ----At4g35610                      <---------ATHB51 <---------AHL20(2)      --------->AHL20(2) --HSFB2a(2)                      --------->YAB1<---------AHL20(2)           <---------AHL20(1) --------->DOF2      ------->TEIL<---------AHL20(2) <---------AHL20(2)       --------->AHL20(1) ->HSFB2a(2)        <---------CCA1(2)<---------ICU4 --------->AHL20(2)----------->GT1  <----------DOF2   agaaaagtctcactacatgtttgaatcttcgatgtttaataattatataattaattttatgcatgtgatgtcgagttattttattgtttctttgtgtata  4749100                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           ----------      <---------ZAT14                                                            --------->HSFB2a(2)      <---------ZAT18        ------>ZmHOX2a(2)           <---------TOE2(3)       <---------HSFB2a(2)      --------->ZAT18       <---------At4g35610        <---------AHL20(2)       <---------LBD16   <---------ANAC46     ------>ZmHOX2a(2)         <-------MYC3          --------->YAB1----------->GT1 <---------ANAC46     <---------AGP1              ------->MYC3   --------->GLK1(2)  <---------ANAC46   ttgatgtgtgaactactatatatcgatctgatctgatcaaggccttcttccacatgtttaatgtgaaattctaatgacaatttctggagggaaaaaagta  4749200                                              <------NtERF2                                              <---------At4g35610                                              <---------ZAT2           <---------AHL20(2)                 --------->ZAT2           --------->AHL20(2)             --------->ANAC46          <---------AHL20(2)        --------->GLK1(1)    --------->YAB1                  --------->At4g35610                    ------>ZmHOX2a(2) -------AtSPL8  --------->YAB1      <---------At4g35610          --------->AHL20(2) >DAG2<---------AHL20(2)          <---------ZAT18               <---------ATHB12 ------>AtSPL8 <---------YAB1   <------NtERF2 --------->At4g35610--------->YAB1                     - >DOF2<---------YAB1          <-----------RAV1(2)             --------->WOX13(1)          <----------   ctacatttataatttatatcatagaagtagaggcagggagctctaggcagcttgagaagttgctcaatcaaatttgatcgtgtacatgtttatgtcacat  4749300  Previous    Next  AGI:  At3g14260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53870.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62790.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 4747776    to: 4748826    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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