Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ------->GAMYB                                                                                     <---------MYB55(2)                                                                                     <---------MYB111(2)                                                                                     <------------MYB.PH3(2)                                                                                     <---------MYB52(2)                                                                                     --------->MYB46(3)    <-----------GT1                                 ---------->DOF2                 ------>MYB83   <-----------GT1                               ----------->RAV1(1)             --------->MYB46(3) -------->ARR14(2)                          <---------At4g35610                 ------->TEIL ---------ARR14(2)                     <---------bZIP60(1)          <---------YAB1  ------>MYB46(1) -REM1(1)                      ---------->DOF2  <----------ID1   <---------TOE2(3) ----------->RAV1(1)   caaattttccaatctctgagaaaacgttatggagaaagatgacttcagaagcgacaaagaattggctaatgttattgaaatgaaccaacaaactattgat  4677400                                       --------------->AGL15                                       <---------------AGL15                                 <---------ICU4       --------->YAB1                             <---                          --------->At4g35610    <------ZmHOX2a(2)                           <-------                          <---------At4g35610  <------ZmHOX2a(1)                      <---------YAB1                      <---------ARR14(2) ---------->DOF2                           --------->GLK1(2)                --------->HSFB2a(2)   ----------------->AGL1                       <---------ARR14(2)                <---------HSFC1(1)    ----------------->AG                        --------->GLK1(1)                <---------HSFB2a(2)   ----------------->AGL3  ----------->RAV1(1) <---------GLK1(1)   gcctcaaacaatttcgatctagaagttctgatgcctcattaccaaaagaggatcactcatatagcaacagtgactctgaattggaaatctgattcagcga  4677500                                                    <--------P                                                   <-------GAMYB                                                  --------->MYB111(2)                                                  --------->MYB55(2)                                                 --------->ALFIN1                                   -                                                 <---------AtMYB61                                  -                                                <-------GAMYB                                       -                                                <------NtERF2                                       -                                               <---------MYB46(3)                                   -                                              <---------ANAC46                                      -                                              <---------DEAR3(1)                                    -                                              <---------AtMYB61                                     -                                              --------->ALFIN1                                      <                                              <---------DREB2C(2)                                  <-                                             <------NtERF2                                         --                                           <---------DEAR3(1)                                      --                                          <---------LBD16                                          --                                         ====================MYC_MYB                               --                                         ===============MYC_MYB                                    --                                         --------->ANAC46                                          --                                         --------->TGA1a                                           --                                         ===============MYC_MYB                                   <--                          --------->ZAT2 <---------bZIP60(2)                                 --------                          <---------ZAT2 <---------TGA1a     --------->LBD16                ---------                          <---------At4g35610<---------ABI4(1)                              <--------                          --------->At4g35610------>NtERF2 <------NtERF2                  --------->LBD16                     <---------LBD16     <---------O2      <---------LBD16              <---------LBD16                   -------->P         ----------->HVH21   ------>NtERF2                --------->MYB52(1)                   ================================MYC_MYB--------->MYB52(1)          <---------ALFIN1          --------->CCA1(2)          <-----------HVH21<------MYB46(1)           <------ZmHOX2a(1) <--   --------->CCA1(2)----------->RAV1(2)  --------->O2 <------MYB83            --------->ALFIN1    <-- ------KAN4(2) --------->At4g35610<---------ANAC58--------->MYB52(2)         <------ZmHOX2a(1)   ---- --At4g35610   <---------At4g35610<---------ANAC58<---------MYB46(3)<---------YAB1  ----------->RAV1(1)   atgagctatgagctatgagctaacctggagctcgagacttgtcacgcggcggtggttggccaccggaagtatgagagaaggaggagcaacaccggataag  4677600      --------->ZAT6  <------NtERF2 ------>NtERF2 <---------ATERF1(1) -------->RAP2.3(2) -------->RAP2.6(2) -------->RRTF1(3) -------->DEAR3(1) -------->RAP2.3(3) -------->ATERF1(2) -------->RRTF1(2) -------->DREB2C(2) ---------ATERF1(2) -----NtERF2 ------->ATERF1(1) ------->RAP2.6(1) ------->DEAR4(2) ------->RRTF1(1) ------->ORA47(2) ------->RAP2.3(1)                                  --------->TOE1(3) ------->ERF1                                      --------->At4g35610 -------RAP2.3(1)                                  <---------At4g35610       <---------MYB52(1) -->DOF2                                           ----------->GT1  <---------At4g35610 >ARR14(2)                            --------->MYB52(1)            --------->At4g35610 -ARR14(2)---------->DOF2           <---------MYB52(2)          <---------ARR14(2) -------ATERF1(1)            <------ZmHOX2a(1)<---------HSFB2a(2)   --------->LBD16 -------DEAR4(2)            ----------->GT1<----------DOF2      --------->ARR14(2)  <---------YAB1 ----->ANAC46 ---------->DOF2----------->GT1  --------->HSFB2a(2)*TSS<---------MYB52(1)------->TEIL   cgccgccatcactaaagaaagctctctgagaggataaaacaaacgctttgggaagcttaaaactcgtttccgctggtctgttttttatgaaacttgtaca  4677700                                    <---------DAG2                                                 <-                          ----------->GT1                                                          <-                          <---------ZAT6                                   <------ZmHOX2a(1)      ---                        <---------At5g28300                              <---------TOE2(3)        <--                       <-----------GT1                            <------NtERF2                  <---                   <---------AHL20(2)                         --------->ANAC46               <-------                   --------->AHL20(2)    <-----------GT1      --------->ANAC58      <---------ANAC58                  --------->AHL20(2)<----------DOF2           --------->ANAC58 <----------DOF2  <----            <-----------GT1    <-----------GT1      ---------->DOF2<---------ANAC46 <---------ANAC58-   agactgcccctgtttttctatttaattacagttaaacccttttttactaagcttcaaagatgaaacgcagcgtttaaggagcttttgcttaaactctggt  4677800          <-----------RAV1(1)        <---------ANAC46    --------->ZAT14    <---------ZAT14 --------ANAC46     *TSS  <----------DOF2                         ---------->DOF2 --------RAP2.6(2) <---------DEAR3(1)                       --------->ARR14(2) ------>ATERF1(1) <------NtERF2      <---------ZAT18        <---------ARR14(2) ----NtERF2  <---------ANAC46      --------->At4g35610      <---------ARR11(3) ------ATERF1(1)<---------DEAR3(1) <---------At4g35610     <------ZmHOX2a(1) ----RAV1(1) --------->bZIP60(1)   <---------LBD16    --------->ALFIN1        --------->ARR11(3) -----DEAR3(1) <------NtERF2     <-----------RAV1(2) --------->At4g35610      <---------GLK1(2)   --- ----->NtERF2<---------bZIP60(1) ---------->CDC5     <---------At4g35610      <---------ARR11(3)  ---   ggcgactgttctgtgtcgtcgtcgctgtctttgtctcagcggagtcttctactggagcggaggattttaaaagggttttagatttttgacgactacaaaa  4677900                                                                                    <-------GAMYB                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                <----------DOF2                                                                              --------->At4g35610                                                                              <---------At4g35610                                                                           <--------P <---------DEAR3(1)                                                                          <-------GAMYB                                 <---------At4g35610              --------------->AGL15             <       <---------At4g35610    <----------DOF2                     <---------------AGL15<------MYB46(1)       --------->At4g35610<---------ZAT18                        ----------------->AG<---------MYB52(1) ------>TOE1(3)           ------>NtERF2         --------->CCA1(2)----------------->AGL1<---------MYB46(3) ------>TOE2(3)           --------->LBD16    <---------TOE2(3)   <-----------------AGL2<------MYB83 -   ccctaatcgagctcaacttgagcattgccgcgctcttctgctattctaagatttgatatttctgcataccacttggggttagctttcgttggtgaagaaa  4678000              --------->HSFC1(2)              <---------HSFC1(2)       --------->CCA1(2)                                                    --------->At5g28300      --------->ARR14(2)                          <-----------HVH21     --------->MYB52(1)      <---------ARR14(2)              --------->LBD16             --------->LBD16 --------->CCA1(2)                   --------->LBD16             <---------ANAC58              <----- ---------ARR14(2)      --------->STY1(2)        <---------ZAT6  <---------ANAC58              <----- -------->ARR14(2)      <---------STY1(2)------>NtERF2    <------ZmHOX2a(2)----------->GT1    <------   tggatatggatatggacacttcccctagctacttcgaccccgaggccctcagtgttagggatcaattccgtcgctatcggtaaaattttcgactaccctt  4678100                                                   <---------MYB46(3)                                                   --------->MYB52(2)                                                  <---------TOE1(2)                                                 <---------MYB52(1)                                               <---------ANAC58                                               <---------ANAC58                                            <---------MYB46(3)                                          <-------GAMYB                                        <---------TOE1(2)                  --------->At4g35610       <---------LBD16                 ------>ZmHOX2a(1)      --------->ZAT14   <----------DOF2      ---------->DOF2--------->LBD16        <---------ZAT18  <---------GLK1(2)  --------->TOE2(3)<---------LBD16  <---------MYB46(3)  <---------At4g35610 -----DOF2           --------------->AGL15<---------ANAC58    --------->SPL7 ----DAG2            <---------------AGL15<---------ANAC58<---------------AtSPL3 ---DAG2             <----------DOF2 ----------->RAV1(2)  <---------------AtSPL8   ttccgattttctgggtcttcttactttaaagtgaatttttcctgggttgtcgtttgtttgttagtacggtctaaattagctgattctagcgagacttgaa  4678200                                                                              <---------ZAT6                                                                          <---------ZAT14                                                 <---------TOE2(3)--------->ARR14(2)                                                 <---------TOE1(3)--------->GLK1(2)              <---               <---------GLK1(2) ------->TEIL <---------ARR14(2)  <---------ARR14(2)       --------->LBD16         --------->ATHB12       <---------GLK1(2)<---------YAB1  <---------GLK1(2)       <---------LBD16   tgcgatttgaattgttggattttctctaagaactgaatcttattaggggttatggttttagttcatggaatctgggtatagtgttttgatgcccggctat  4678300  Previous    Next  AGI:  At3g14110.1    Description:  FLU (FLUORESCENT IN BLUE LIGHT); binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO45591.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 4676125    to: 4677665    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g14120.1    Description:  similar to hypothetical protein OsJ_033267 [Oryza sativa (japonica cultivar-group)] (GB:EAZ19058.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ65731.1); similar to hypothetical protein OsI_021263 [Oryza sativa (indica cultivar-group)] (GB:EAZ00031.1); contains InterPro domain Nuclear pore protein 84/107; (InterPro:IPR007252) Range:  from: 4677820    to: 4685673    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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