Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->YAB1                                                        ------>MYB83                                                        ------>MYB46(1)                                                        --------->MYB52(1)                                                       --------->MYB55(1)                                                      <---------MYB59                                                      <---------MYB111(1)                       ------>MYB46(1)                <---------MYB52(2)                       ----------->RAV1(1)            <---------MYB111(2)                       --------->MYB52(1)             <---------MYB46(2)                       ------>MYB83                  --------->ANAC55(2)                      --------->ANAC46               --------->ANAC58            --------->GLK1(1)           <---------At4g35610                   <---------ALFIN1                <---------GLK1(1)           --------->At4g35610              --------->ANAC46              <---------GLK1(2)          ----------->RAV1(1)               --------->ANAC58              --------->ARR14(2)        <---------At4g35610                 --------->ANAC58   --------->ANAC55(2)        --------->At4g35610               --------->MYB46(3)   <---------ANAC55(2)                  -      --------->YAB1 --------->MYB46(3)<----------ID1--------->ANAC46     <---------ARR14(2)     ---- -------->YAB1       <---------MYB59 --------->ANAC58<---------ANAC55(2)  --------->ARR11(3)    ----- ------->DOF2       --------->ANAC46 --------->ANAC58--------->ANAC55(1)  <---------ARR11(3)  ------- ---->RAV1(1)     <-----------GT1  ---------->DOF2   --------->ANAC58   ----------->ARR10   <------ZmHOX2a(1)   aaaagtaatcagcagcagtattacccaacagataaaacaaagcaacaagccaaacacctaacatcatgtaacccaagatactgaaatctctacaggagca  4662700          <---------TOE2(3)      --------->At4g35610      --------->ZAT2      <---------At4g35610      --------->LBD16            --------->ARR11(3)     --------->GLK1(2)       <-----------RAV1(2)   <----------DOF2 --------->DOF2            <-----------HVH21      <---------ANAC58       --------->At4g35610 ----->At5g28300          --------->WOX13(1)      <---------ANAC58  --------->YAB1 ------>GT1            --------->GLK1(2)    <---------ANAC58  --------->ANAC58      <-------MYC3 -->At4g35610     ---------->DOF2           <---------ANAC58  --------->ANAC58      ------->MYC3   gtaaaagaagctgaggtaatcaaagaatccatcaggggaacaaattgggtttgcttttaagaactcgcattgatcagcataacccatgtgtttgtgtaac  4662800                                           --------->HSFB2a(2)                                        <-----------GT1                                     --------->YAB1                                     <---------ICU4                                   --------->YAB1                                     <--------HAHB4                                   --------->TOE2(3)                                    --------->ICU4                                 <-----------GT1                                    <---------YAB1                      --------->GLK1(1)                             <---------At4g35610                    --------->ANAC58  --------->TOE1(3)                             <---------ZAT2<---------HSFB2a(2)      --------->ANAC58 <---------YAB1   cctgagcataaaacagtactactgctactcaagctgctattattaccagaaccattcgtttcaatttgcctcgcatttctacgaattaccataaactggg  4662900            --------->ALFIN1                               <---------GLK1(1)           <-------GAMYB--------->AtMYB61       ------>ZmHOX2a(1)          <---------MYB46(3)       ---------->DOF2    --------->MYB52(1)                  --------->ANAC58         <---------AtMYB61      <---------TOE2(3)    ---------->DOF2                      --------->ANAC58       --------->LBD16 --------->MYB46(3)      --------->ANAC55(2)                     --------------      <---------HSFB2a(2)      >>>>>>>>>WRKY18 <---------ANAC55(2)                ---------->DOF2      --------->HSFB2a(2)     --------->WRKY12 --------->TOE2(3)                <------ZmHOX2a(2)     <---------LBD16<---------MYB52(2)         --------->TOE1(3)       <---------------------WRI1   tgatacctccggaggttgagccactaccaccattgacgaaagacgcgttccttaacaaagggtttctgagtaattcgctccgatcaaagaagaagcaaaa  4663000                                                                              <---------ICU4                                                                     ------->GAMYB                  -                                                                   -------->P--------->ICU4         -                                                                <---------MYB52(2)                  -                                                     ----------->GT1--------->MYB46(3)              -            --------->GLK1(1)                      --------->At4g35610--------->ZAT18               -       --------->ZAT14                             <---------At4g35610<---------ZAT18               -       <---------ZAT18                 <---------LBD16  ---------->DOF2      <---------YAB1       ---       <---------ZAT14              >>>>>>>>>SARD1 --------->ZAT2  <---------At5g28300         <----- ---------->ANAC81                  >>>>>>>>>CBP60g<---------ZAT2 --------->MYB52(1)    <----------DOF2   cagaaccagagcacaaatcccattgaaaacccctcgaaatttgggggttttcgagctgtaaagaaaactaaccgcgctcattattcaaaactttatatta  4663100                                                                              --------->ARR11(3)              <---------ARR11(3)                                           <-------TEIL    --------->ANAC58                        ---------->DOF2               --------->CCA1(2)    --------->ANAC58                  ------>MYB83                        --------->ARR14(1)        - -------->AtLEC2                      ------>MYB46(1)                    <---------ARR11(3)         = -------->ANAC58                    ------->GAMYB                        --------->ARR11(1)        -- -------->ANAC46                    <---------MYB59            --------->AtLEC2                   --- -------->ANAC58--------->YAB1   --------->MYB52(1)            --------->ANAC46                 ----- ----->MYB83  --------->ARR11(3) ------>MYB83                  --------->ANAC58   ----------->GT1<--- ----->MYB46(1)<---------YAB1    ------>MYB46(1)     --------->STY1(1)   <---------ARR14(2)     <---- ------------------>WRI1       <---------MYB59       <---------STY1(1)   --------->ARR14(2)     ----- ------GT1   --------->YAB1    --------->AtMYB61  ------>NtERF2--------->ANAC58 <------------CBF<----   ccaagcaagcatcgatgatcataaaccccaaaacctaaccgaaccagaaaggggcctagggtttcaagcaaacaagatacgatattgaaaaacccaagga  4663200           <-----------RAV1(2)          <------ZmHOX2a(2)         <-----------HVH21                               --------->TOE1(2) ----->ZmHOX2a(1)                                        --------->TOE2(2) ================HOX2a_HOX2a                     <---------YAB1 ------->TOE2(3)                               ----------->GT1 --->ZmHOX2a(2)                              <------------CBF ---->ARR14(2)                          --------->HSFB2a(2) ---ZmHOX2a(2)                          <---------HSFB2a(2) -----ARR11(3)               --------->WOX13(1)--------->YAB1        <---------ZAT6        ---------- ---->ARR11(3)  <---------MYB46(3)    <------ZmHOX2a(2)  <---------LBD16            <------------CBF -----ARR14(2) --------->ALFIN1   --------->At4g35610   ----------->RAV1(2)  ---------->DOF2   tcctcagtttcgatcaggtggtcaccaagattaatcagcgatcgagaaattgtaataaacctgggaatttagagttgggaaaagagaattggcaaaagag  4663300                                       <---------WRKY38(1)                                      --------->WRKY18(1)                                     <-----------HVH21                                   --------->DEAR3(1)                                  <------NtERF2                   <---------ANAC55(2)                                  --------->ATERF1(1)             --------->ANAC55(2)              ------------>CBF   <---------RAP2.3(1)              --------->ANAC46                <--          --------->ANAC58      <---------DEAR3(1)                --------->ANAC55(1)   --------->O2          --------->ANAC58      --------->ANAC46                  --------->ANAC58      <---------ANAC58    --------->ZAT18         <---------HSFB2a(1)                   --------->ANAC58      --------->TGA1a    <---------ZAT18        <---------ARR14(2)                    <---------LBD16        <---------TGA1a   <---------ANAC58        --------->ARR14(2)           <-------TEIL                    <---------ANAC58   <---------ANAC58      <------ZmHOX2a(1) ------------>CBF  ----------->HVH21          <---------bZIP60(2)   <---------ANAC46--------->YAB1------>NtERF2      <---------TOE1(3)                   <---------O2 >DOF2    --------->ANAC46 --------->GLK1(2)       <-----------RAV1(2)  --------->YAB1  =============   aaatggtgtgctacgaaacaatggtgaggaatctgcgccggtcaaaacaatgttcaggttcatttgacacggaatcatatcaaacgatagacgtggcatt  4663400                                                      --------->ICU4                              <-------GAMYB       --------->AHL20(1)                             --------->MYB55(2)   <---------AHL20(2)                           <---------MYB52(1)     <---------AHL20(1)                          --------->TOE2(3)   <---------YAB1          --------->HSFB2a(2)<---------MYB46(3)   --------->AHL20(2) <-----------GT1             <---          <---------HSFB2a(2)--------->MYB52(2)--------->YAB1 --------->AHL20(2)                 <--- --------DOF2        --------->ATHB12       --------->YAB1    --------->YAB1                     <--- ========bZIP_DOF   <---------YAB1         <---------YAB1<---------YAB1                   <----------DOF2   cttttcatttttctaaaaactgatgattcgttagttgtctagttgatcataataaaatgatcaataaaaaataacatatcacaaattttagactttaggg  4663500                                                           <-------GAMYB                      -------                                   --------->ZAT14        --------->MYB52(2)                 <-------       >>>>>>>>>>WRKY63   --------->YAB1       <---------MYB46(3)                          <---------ICU4       <-----------GT1   <---------YAB1     <---------ANAC58    ---------->DOF2           --------->ICU4 ------ANAC46            <---------ATHB12   <---------ANAC58<---------MYB52(1)          --------->YAB1 ------ANAC58      <----------ID1 <----------DOF2         <---------MYB46(3)           <-------TEIL ------ANAC58 <---------AHL20(2)  <---------DAG2         <-------TEIL         <---------TOE2(3)   cgtattatttgactatttaaaacgacaatgatactactttactcagtcgtggttactggttcgttagaaagagacattctaatgttcgattcattatgag  4663600  Previous    Next  AGI:  At3g14070.1    Description:  CAX9 (CATION EXCHANGER 9); cation:cation antiporter. similar to cation exchanger, putative [Arabidopsis thaliana] (TAIR:AT1G54115.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75238.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65232.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45605.1); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) Range:  from: 4661150    to: 4663081    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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