Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ICU4                                                       --------->ATHB12                                                       --------->YAB1                                                       <--------HAHB4                                                      <---------ATHB12                   <-----------GT1                    --------->ICU4                --------->YAB1                        <---------YAB1                <---------ICU4              --------->TOE2(3)      --------->AtMYB61               <---------YAB1             <---------TOE2(3) --------->ANAC58        <-------TEIL             --------->YAB1   ---------->DOF2       --------->ANAC46      <----------DOF2          <----------DOF2   <---------YAB1<---------YAB1    --------->ANAC58   ---------->DOF2   aaggcttaagcactttcattataacccattttgaaagtcaagttaacattatccccatcattaagcaaaccatacccttttaaaagttcatttcgaattt  4636000                         <----------DOF2                        <---------ANAC58                   --------->MYB52(2)              <---------TOE1(3)             <-----------RAV1(2)          <---------ANAC58                                                           <---------YAB1          <---------ANAC58                                          --------->AHL20(2)      ------>ZmHOX2a(1) <---------ANAC46                <---------ANAC58    ----------->GT1      <----------DOF2   <---------ANAC58             --------->GLK1(1)     <---------TOE2(3)   <-----  --------->ARR14(2)<---------ANAC58       <---------YAB1     --------->LBD16      <-----------GT1 <-  <---------ARR14(2)<---------ANAC58   <----------DOF2  <---------ANAC58 ---------->DOF2       <-----   gaagtatcctttgcttcaggttacttgcttttacaaaaactctttattcttgctgatttctttccacaaatgaaataaaggtaaattacaatcgaaggct  4636100    <---------MYB52(1)   <----------DOF2   ------>ZmHOX2a(1)                   <---------YAB1  --------->TOE2(3)                 --------->ARR11(3)          <------ZmHOX2a(2) ------>ZmHOX2a(2)          --------->CCA1(2)     ----------->GT1          ---------->DOF2 ----ANAC58                --------->ARR11(3)    <---------TOE2(3)     ---------->DOF2 --------ARR11(3)          <---------ARR11(3)    <---------TOE1(3)---------->DOF2         ---------->DOF2 ----ANAC58       ----------->GT1   <---------ARR11(3)       ------>ZmHOX2a(2)  ---------->DOF2   tgatcctttatgttttatgtgtgttaaaagatttagaagttcttaatggctaaggtaaaatgatcgatcaaagaaaagaaagaaaagacagaaaaagaaa  4636200                                                                                                 ----                                                                                            <--------                                                                                    --------->YAB1  -                          ------>NtERF2                                        ----------------->AGL3               --------->YAB1                                                  ----------------->AGL2             --------->AtLEC2                                             ---------->DOF2<-----------  ---------->DOF2---------->DOF2---------->DOF2                     <-----------------AGL1<---------REM1(1)   acataaaagcttgacattcaaaagttgaggcctataaagtttctcaaactcagtttatagcccatgttgagcccattaaggcccaaatatagttgtacca  4636300                                          <---------ANAC46                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                           --------->ANAC46                  <------MYB46(1) --------->ARR14(2)                  <------MYB83    <---------ARR14(2)                 <---------------AtSPL8   <---------ANAC58                 --------------->AtSPL8<---------MYB52(1)           <------MYB46(1)<---------REM1(2) <---------REM1(1)  <-------PIF5  <---------WOX13(1)--------->ARR11(3)<---------ZAT2   <---------YAB1  --------->LBD16  ------->PIF5 <------------CBF   <---------ARR11(3)<---------At4g35610 *TSS <---------ANAC58 ----->AtLEC2 <---------MYB46(3) ------->GAMYB  --------->STY1(2)    --------->ICU4 <---------ANAC46 ---GT1 <---------MYB52(1)--------->ZAT14 <---------ANAC55(1)   <----------DOF2    <---------LBD16 ------>TEIL  --------->ATHB12--------->MYB52(1)<---------STY1(2)  --------->YAB1 ------>ZmHOX2a(1) ----AtSPL8<------MYB83   <---------ZAT14 <---------ANAC58 <----------DOF2   <---------ANAC58--------   tgcacttgcccgtaggtgattggtactctacacaacgatctgtttcgtgtagctagctgttctttcctttcatgattttgcttcctgcggaaaatcaaag  4636400              <---------ATHB12                                     <---------MYB52(1)       <---------ZAT2                                             <-----------HVH21       --------->ZAT2                                             <-----------TGA1       --------->At4g35610              <----------DOF2          --------->ANAC46       <---------At4g35610    <---------YAB1                   <---------At5g28300  --------->At4g35610        <---------ARR11(3)              --------->WRKY38(1)  <---------At4g35610        --------->ARR11(3)              --------->WRKY12             --------->ZAT2 --------->MYB59          <---------GLK1(2)         --------->At5g28300       ------>ZmHOX2a(1) -->DOF2      <------ZmHOX2a(2) <----------DOF2<-------TEIL --------->DOF5.7(2)--------->TOE1(1)  ---   agttagctcagctccgatcactctctccgattatctttcgctctttagattcatggtgaatcgtttaccgtcactctctcctcgtaaaccctagctctct  4636500                                                                <---------AHL20(2)                 <-------GAMYB                                --------->TOE2(3)                <---------ANAC46                              <----------DOF2     <---------ANAC58                <---------ANAC58                      --------->ANAC58            <---------ANAC46                <---------ANAC58                  <---------HSFB2a(2)             <---------ANAC58---    --------->TOE2(3)                             --------->HSFB2a(2)  <-----------RAV1(1)        ===    --------->TOE1(3)                 ---------->ID1  --------->ANAC58 --------->ALFIN1       <------ ------>ANAC46 ------>NtERF2     <---------ZAT2<----------DOF2<---------------AGL15    <---------AtMYB61   ccgaaaccctaactcgctgcgttggaaactaatcgagctcgtccctctcctttcggaagcatttctttaatcggtgttgcagaggcgttttggtttctga  4636600                     <---------ARR14(2)                     --------->ARR14(2)                     <---------ARR11(3)                     --------->ARR11(3)                    --------->RVE1(1)       <----------DOF2     <---------At4g35610                                                 <----------DOF2     --------->At4g35610 ------>ZmHOX2a(1)<---------ARR14(2)         <---------ANAC58   --------->ATHB12  <--------P  ----------->GT1             --------->ARR11(3)         <---------ANAC58 <----------DOF2 --->ZmHOX2a(2)     --------->CCA1(1)    <---------CCA1(2)      --------->ATHB12    --------->LBD16 ===============================HOX2a_HOX2a <---------LBD16     <---------ICU4     <---------ANAC46 ---YAB1     <---------TOE2(3)    <---------GLK1(2)            <---------YAB1     <---------LBD16   tcgggttagctttctgaggtaaatatcctcttcttcgattcttatatctggatttttagtttatcttcattgcttctttattcttccgcgttattgggaa  4636700                                                                      <---------WOX13(1)                                                                    --------->ATHB12                                                                    <---------ICU4                                                            ------>ZmHOX2a(1)                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        <---------ARR11(3)                <----------                                                        <---------ARR14(2)             <----------DOF2                                                        --------->ARR11(3)    --------->ATHB12                                ------>MYB46(1)         --------->ARR14(2)   <---------YAB1         <---------TOE1(3)      ------>MYB83           --------->GLK1(1)   --------->At4g35610         <---------TOE2(3)    <---------MYB59<---------ARR14(2)    <---------YAB1   ------->TEIL   <-   --------->ATHB12   --------->HSFB2a(2)    --------->ARR14(2)    --------->ICU4  <---------CCA1(2)  <---------YAB1   <-----------GT1--------->ZAT6       <---------GLK1(1)   <---------At4g35610 <-----   tttgatgatttagggtttgttttactggaatacctagctctagctcgaatacgttggagatcctatttcatgattgcagatgattgtatctttgattcac  4636800                                                                             --------->LBD16                                                                           <---------At4g35610                                                                           <---------LBD16                             --------->At4g35610                          <---------ANAC46                  <---------ANAC58                                      <---------At4g35610                  <---------ANAC46                                      --------->At4g35610          <----------DOF2    <---------At4g35610                       <-----------RAV1(1) --------------ANAC81   <---------MYB52(1)                         <---------ANAC58  <---------MYB46(3) --------MYB52(1) <---------RAP2.6(2)              <-----------GT1 <---------ANAC58  --------->ATHB12 ----At5g28300    <---------ANAC58      <----------DOF2    --------->TOE2(3)<---------ANAC46     ----   tgttatgccttcctttttttgcgtctgtttgtgctgaaaactctttgattttgtttccatttcttaattgtttgtgctgcggattaatggttgaaatcaa  4636900  Previous    Next  AGI:  At3g14010.1    Description:  CID4 (CTC-Interacting Domain 4); protein binding. similar to CID3 (CTC-Interacting Domain 3) [Arabidopsis thaliana] (TAIR:AT1G54170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45647.1); contains InterPro domain Ataxin-2, N-terminal (InterPro:IPR009604) Range:  from: 4636372    to: 4640988    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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