Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------>NtERF2                                --------->LBD16                               <---------ANAC58         --------->TOE2(3)                               <---------ANAC58         --------->TOE1(3)       --------->At4g35610            --------->YAB1    <---------LBD16      ---------->DOF2             ----------------------           <-------TEIL    ---------->DOF2       --------->At5g28300         ---------->DOF2   <---------REM1(1)     --------->ARR11(3)     ----------->GT1             <------ZmHOX2a(1) ------->ARR11(3)        <---------ARR11(3)  --------->MYB52(1)   --------->LBD16          --------->CCA1(2) --------ARR11(3)      <---------YAB1      --------->MYB46(3)     <-----------HVH21   ---------->DOF2   agatgttgtagcattcatcgtgatcaagataatgcggaccagagaacaaacagtaaaaccctaacttccgtcaaactaggaaagcagaaaaagagatgaa  4630200                                      <---------MYB52(1)             ----------->GT1                      <---------GLK1(2)                              <---------ZAT6                     --------->At4g35610                       <---------TOE1(3)                 ----                     <---------At4g35610                       <---------TOE2(3)              <------         --------->TOE2(3)  <---------ALFIN1              <----------DOF2       --------->At4g35610 -->ANAC81       ------->TEIL  --------->DEAR3(1)    <---------At4g35610  --------->ICU4      -------   gagagaagaaaccttgatgaatcagcttctccacagcctcgttagcatccatgttagcttcttttaaggcagtgtaaatatcagcatcggagtgactatc  4630300                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                       --------->ANAC55(2)                                                 ------>MYB46(1)                         <---------ANAC55(2)       ------>ZmHOX2a(1)                         -------->P               --------->PCF2<---------LBD16      --------->TOE2(3)                          ------>MYB83          --------->HSFB2a(2)     ------      --------->TOE1(3)              <---------YAB1                    <---------HSFB2a(2)   <------ZmHOX2a(2) ----->ANAC46            <----------DOF2        ------>ZmHOX2a(1)   <---------AGP1     --------->MYB52(1) ---ARR14(2)         --------->YAB1--------->REM1(1)        <---------At5g28300     <---------ICU4  < -->ARR14(2) --------->ATHB12---------->ID1     <---------ALFIN1<---------MYB52(1) <---------YAB1   -   cacaacttccttaatcgattgaatcatctttttcgcttcatcatcgagtcctaccccacgattaccgctagttctggacccagtcaccattacggatcaa  4630400                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                     <-------TEIL                                                                                 <---------TOE2(3)                                                                              <---------ATHB12 <-----   ------->TEIL                ---------->DOF2                          --------->At4g35610   ------- ---->DOF2           --------->ANAC58                                <------ZmHOX2a(2)        <------ ---------ANAC55(2)  --------->ANAC58          ------>ZmHOX2a(2)    --------->ARR11(3)<---------At4g35610 -------->ANAC55(2)  --------->ANAC46        <---------ARR14(2)   ----------->ARR10 <--------P<------   agacgtatcgaataaaccgaaacacacaaaaaacaaagaaattcaaggatcgagtagcgaaaccaagtgagatcagcgtaatcaaggtagatgctaatga  4630500                                                <---------ZAT14                                                --------->ZAT14 -->HAHB4                                   <---------HSFB2a(2) --->ATHB12                                 --------->HSFB2a(2) ----ICU4                                   <---------------AtSPL8 ---ATHB1                                  <---------ANAC46               <----------ID1          <-- -->ICU4       ---------->DOF2       <---------TOE2(3)             <----------DOF2              ----- ---ATHB12 --------->TOE1(3)   <---------MYB111(1)            --------->SPL7           ============== ---YAB1   --------->TOE2(3)   --------->MYB46(3)            --------->MYB52(1)        ---------->DOF2   ttcgactcttaaaccctaaaatcggatagagcaactactagggtttcgagtacagagaagagggaacggctttaagagaacaaaaaaaaaaaagaagtta  4630600                    *TSS                    <---------AHL20(2)          --------->O2          --------->ANAC55(2)          --------->ANAC46          --------->ANAC58                             <------------CBF          <---------O2<------------CBF                ------>MYB46(1)          --------->ANAC58                            ------>MYB83    --------->TOE1(3)          --------->TGA1a                           <---------MYB59   --------->TOE2(3)          <---------TGA1a                   ----------->GT1       <-----------GT1                  -- ----ZmHOX2a(1)----------->GT1           <------------CBF <-----------GT1        ------------>CBF <-- ---->MYB59   <------NtERF2             --------->ATHB12<---------WOX13(1)    <-----------GT1     <-- ===================bZIP_DOF        <-----------GT1 --------->TOE2(3)--------------->AGL15        <--   ggatttattctcacgcgtcgaaaaaattggttccaaattcactaattggataaacctaattgactattttacccttaatataactcaatagaaagattag  4630700                                           --------->At4g35610                                   <-------TEIL                              <------ZmHOX2a(1)       <-----------GT1                            <---------TOE2(3)  <------NtERF2                     --------->HSFC1(2)    <---------ZAT2 -------->DOF2       <---------HSFB2a(1)   <---------At4g35610     <---------DAG2 -------WRKY45       <---------HSFC1(2)    --------->ZAT2          <----------DOF2  --------->YAB1 -------WRKY38(1)    --------->HSFB2a(1)  --------->MYB52(2)    <-----------GT1<---------YAB1     <-- -------WRKY12   ----------->GT1  --------->CCA1(2) --------->AHL20(2) <-----------GT1        <------   tcaaaggagaagtgagaaatggaaatttctaaggagatacaagttagctggcaatttaactggtttttactttatacatttcttattcagaacatttaag  4630800          -------->HAHB4          -------->ATHB1          <---------ICU4          <---------AHL20(2)          --------->YAB1          <--------HAHB4          --------->ATHB51         <---------ATHB51         <---------YAB1         --------->ICU4           --------->AHL20(2)       <---------ICU4             <---------AHL20(2)       --------->YAB1             <---------YAB1       <--------HAHB4            <---------AHL20(1)       --------->ZAT18       --------->ATHB51--------->YAB1                     <---------ZAT18      <---------YAB1   <---------ICU4                     --------->ZAT14      --------->ICU4  <---------ATHB12                    <---------ZAT14 --------->ANAC46    ------>MYB46(1)           ----------->GT1                              ------->TEIL --------->ANAC58    ------>MYB83--------->AHL20(2)   --------->DAG2                 --------->YAB1 --------->ANAC58   --------->WOX13(1)        --------->DAG2      ----------->GT1   <---------ATHB51 -----TEIL--------->ATHB12       --------->AHL20(1)  ---------->DOF2   --------->ICU4--------->AHL20(2) ---------AtSPL8   --------->MYB46(3)        ---------->DOF2  ---------->DOF2       <---------ATHB12   tacatgccataattattagcaccaatcatggtcaatataattagagaaaaagtaataaagtgcacaaagtgtaattttcaaatccaataatatgaatttt  4630900                           --------->TOE2(3)      <---------ARR14(2)                --------------->AtSPL3            --------->ARR14(2)                  <---------REM1(1)              <-----------GT1                     --------->GLK1(2)       <----------DOF2          <---------------AGL15              --------->ANAC58           --------------->AGL15          --------------->AGL15  --------->AHL20(2)                     <---------------AGL15          ==============================================================================MADS_MADS       <-----------GT1     --------->TOE1(3) --------->ANAC58           ------>ZmHOX2a(1)  <---------ZAT6--------------->AtSPL8  --------->ZAT6----------->GT1  <-----------------AGL3   -----   cttagtattaaactatatacagtacattaccttaagaaaataacaccaagaaaatccagtaaaactaatacctcctctttatagatagatgtagatgaga  4631000                             ------>MYB83                             ------>MYB46(1)                           <---------MYB111(1)                           --------->AtMYB61                           --------->MYB46(3)                           <---------MYB111(2)                           <---------MYB55(2)                        ------->GAMYB                        --------->AtMYB61                       <---------MYB55(2)                       --------->MYB46(3)                      -------->P                     ------->GAMYB                    <---------MYB55(2)                    <---------MYB111(1)                                                     ---------                    --------->MYB46(3)      --------->YAB1                                  ---------           --------------->AtSPL8  --------->DAG2                                           ---------           <---------------AtSPL8 ---------->DOF2                                      <-----------GT1     ---------->DOF2<---------MYB111(2)    <-------TEIL       <---------ARR11(3)   <----------DOF2 ----->DOF2<-----------------------TaNAC69(2)    --------->At4g35610               <---------DAG2   aagaagagaaagagatgtactaacaaccaccaactaaaaagcacattcattatctgaatcccaagttatttccatcactctgtagcttttttccaagtaa  4631100  Previous    Next  AGI:  At3g13990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45644.1); contains InterPro domain Protein of unknown function DUF1296 (InterPro:IPR009719) Range:  from: 4625577    to: 4630620    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g14000.1    Description:  ATBRXL2/BRX-LIKE2. similar to ATBRXL3/BRX-LIKE3 (BREVIS RADIX-LIKE 3) [Arabidopsis thaliana] (TAIR:AT1G54180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45645.1); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591) Range:  from: 4630876    to: 4633418    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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