Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ---------->DOF2                                                                            <---------HSFB2a(2)                                                                            --------->HSFB2a(2)                                                                    <------MYB46(1)                    --------->HSFC1(2)                              ----------->GT1                    <------MYB46(1)                                 <------MYB83               ------                    <---------HSFC1(2)                             --------->MYB46(2)      --------->ATHB12                    <------MYB83                                   --------->MYB111(2)     <--------ATHB1 ---------ZAT14     <---------HSFB2a(1)                        <---------YAB1--------->ANAC46<------- -------->ZAT14     --------->HSFB2a(1)  --------->TOE2(3)     <---------TOE2(3)          <---------YAB1 --->HVH21   --------->MYB52(1) --------->ANAC46   <---------At4g35610 <---------MYB46(3) --------->ICU4   agtgttctatatcgctaatggaaggttccaatacacataagaaccctaatttcatctcatagattaagtttggtgattcgcgaaaggaaggaatgattga  4614500                         <<<<<<<<<RAP2.2                      --------->At4g35610          --------->CCA1(2)                                   <---------At4g35610           ---------         --------->ARR14(2)                     ----------->RAV1(1)                       <------ZmHOX2a(1)         --------->ARR11(3)                    --------->DEAR3(1)                       <---------TOE1(3)         <---------ARR14(2)                    <---------ALFIN1                 --------->ANAC58         <---------ARR11(3)          <---------ARR14(2)--------->At4g35610      --------->ANAC58  ---------->DOF2       <---------TOE2(3)      --------->AtMYB61            <---------------------WRI1 --->ATHB12             <---------YAB1        --------->MYB46(3)           ------->GAMYB<---------TOE2(3) --WOX13(1)    --------->TOE2(3)     --------->ARR14(2)--------->ZAT2  --------->MYB46(3) ===========   ttacaaaagaagatataccttgaatttagattgtttcagtatcggagcaccaccagtagctcgcagatgaacaacaactgcgacgaaattaaggaaaaga  4614600                                                                                                  <--                                                <---------GLK1(2)                              <-----                                        --------->YAB1                                       ------>ZmHOX2a(2) --------->TOE2(3)                     --------->ICU4                                    <-------TEIL ->DOF2     <------ZmHOX2a(2)          <---------ATHB12          <-----------GT1        <--------P--- ==================HOX2a_HOX2a       --------->GLK1(1) <---------At4g35610        --------->MYB52(1)   aaaccatagacacgatcagattagactcgtacaagagagaaatcatcaaaaattctcatcagatttaaaaccatcttaagtgaataacaggttgatcgag  4614700                                                                                              <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                        --------->MYB59                                                                                       <-------TEIL                                                                                      --------->CCA1(2)                                                                                      --------->ARR14(1)                                                                                      --------->GLK1(2)                                                                                     <---------ARR14(2)                                                                                     <---------GLK1(2)                                                                                     --------->ARR14(2)                                                                                     --------->ARR11(1)                                                                                    --------->GLK1(1)       --------->YAB1                                                               <---------GLK1(1) <---------TOE1(3)                                                                  <---------HSFB2a(1) <---------TOE2(3)                                   --------->ATHB12        --------->ARR14(2) -------ARR14(2)                     >>>>>>>>>TBF1 --------->GLK1(2)         <---------ARR14(2)   <-- ----TOE2(3)               <-------TEIL ---------->DOF2         <---------DAG2      --------->HSFB2a(1) ------>ARR14(2)          --------->GLK1(2)   ---------->DOF2   <----------DOF2    ----------->ARR10   gttatggtatagtaatcaaatgcaagagattcaatggaagaagaaagtcaaagaatcaatggctcacttttctgaacagaattcggagattcggtcgcca  4614800                                                                                               <-----       <----------DOF2                                       <----------DOF2                 <-------   <---------RAP2.6(2)                                   <---------GLK1(1)                  --------- >ANAC58                                                 --------->GLK1(1)                 --------->AHL20(2) >ETT(2)                                                --------->ARR11(3)                 <---------AHL20(2) >RAP2.6(2)                                             <---------ARR11(3)                <---------AHL20(2) -ETT(2)                                               *TSS  --------------------->WRI1   <---------AHL20(1) >ANAC58        ----------->GT1                     ---------->DOF2                       --------->AHL20(2) ---------RAV1(1)                             <------ZmHOX2a(1)               <---------HSFB2a(2)   ttgttgcgactttggaagtagaaaaaacttgagaagaacgattttggaggaagttaaagatttctttggaattttggattatagaagcccaaattatttt  4614900                                                                                         <---------ARR11(3)                    --------->ZAT2                                                       --------->ARR11(3)                    ----------->RAV1(2)                                                 <---------CCA1(2)                   -------->P                                             --------->GLK1(2)     --------->ATHB51                                                     --------->ARR11(3)     ---- ----AHL20(2)      ------>MYB46(1)                                        <---------ARR11(3)     <--- --YAB1            ------>MYB83                                <---------HSFB2a(2)      <---------GLK1(1) >AHL20(1)        <---------ALFIN1      ---------->DOF2        --------->HSFB2a(2)      --------->GLK1(1)   aagcccataatttgtaagcccaacctggcccttccgatttttaaaaggccttgttttgttttgttttggaaacaaaaatcttgaaaactgatatctcagt  4615000                        <---------ATHB12                       ------>MYB46(1)                       ------>MYB83                                       --------->ARR11(3)                     <---------MYB46(2)                                   <---------ARR11(3)              --------->AHL20(2)                                  <-------TEIL   <------ZmHOX2a(1) <---------MYB59                             --------->CCA1(2)  ----------->GT1 <-----------GT1                              --------->GLK1(1) ----->ZAT14  <---------AHL20(2)                         --------->MYB52(1)<------ZmHOX2a(2) ------ZAT14 --------->AHL20(2)   <-------TEIL      <---------TOE2(3) ---------->DOF2              --   gaagaggagaaactataaaattaccaaacattcaagttcatactcttcaaaattgacgaaaacggagatacaaaaagatcacaaaatggtatgctctgta  4615100                                      --------->YAB1                                     <-------TEIL                                 <---------AHL20(1)                        --------->YAB1                                 <---------AHL20(2)                       <------ZmHOX2a(2)                                 --------->AHL20(1)                  ---------->DOF2             ----------->GT1    --------->YAB1                    --------->MYB46(3)         <---------AHL20(2)     --------->AHL20(2)           --------->ANAC55(2)     <---------YAB1      ----------->GT1           <---------AHL20(2)          <---------TOE2(3)  <---------AHL20(2)      --------->TOE2(3)     <---------AHL20(2)            <---------AHL20(2)  --------->AHL20(2)     ----------->GT1        --------->AHL20(2)        --------->AHL20(2) --------->ARR11(3)         - ------------->AGL15       --------->AHL20(2)         <---------AHL20(2) <---------ARR11(3) ---------   acttaaaatgttaaaatgtgaaaaacattttaaattatattcataaataaaactttttaatttatgtaaccaaaagatcataaaattgtgaatgagatgc  4615200                                                                                    <---------ANAC55(2)                                                                                    --------->ANAC58                                                                          --------->YAB1                                                                         <---------ATHB12                                              <---------AHL20(2) <-------GAMYB      --------->ANAC55(2)                                          <--------HAHB4        <---------MYB46(3)  --------->ANAC58                                          --------->YAB1        <------MYB46(1)    <-------TEIL                             <---------AHL20(1)               <---------MYB52(1)   --------->SPL7                             --------->ARR11(3)             <---------MYB46(3)     ------->TEIL                             <---------ARR11(3) --------->AHL20(1)       <<<<<<<<<ARR2      <---------AHL20(2)     --------->AHL20(1) <---------AHL20(1)     --------->WOX13(1)<-----------RAV1(1)     --------->AHL20(2)   --------->AHL20(2)<---------YAB1  <-----------RAV1(1)   --------->SPL1(1) <---------AHL20(2)   ---------->DOF2    <---------YAB1   --------->At4g35610    <---------SPL7 -------->AHL20(2)  <---------AHL20(2) ------>ZmHOX2a(1)  <---------At4g35610  --------------->AtSPL3 >At4g35610   --------->AHL20(2) <-------TEIL--------->AHL20(2) <------MYB83   <---------------AtSPL3   gattttataaaattgattatatataaaagaaaatattcatcctattattatatattagtcatctgttggttaacaatcaaaaccgtacgtactgttgtat  4615300                                                                                      <---------DOF5.7(2)                 <---------YAB1                                                   --------->YAB1            <---------ANAC55(2)                                       <---------TOE2(3)    <---------            --------->ANAC55(2)                               ----------------->AGL3--------->DOF5.7(2)          <-----------GT1         --------->AHL20(1)       <---------WRKY18(1)   <---------ATHB12      --------->ARR11(3)          --------->ARR11(3)      --------->WRKY12     --------->WOX13(1)      <---------ARR11(3)<------ZmHOX2a(1)                 --------->WRKY38(1)<------ZmHOX2a(2)-------   ttcatatagatattacatgatgagaaggactagacatatattgaaaacaagacgatgacattgacccattttgagatagatcaatcgttatcgctataaa  4615400  Previous    Next  AGI:  At3g13970.1    Description:  APG12/APG12B (AUTOPHAGY 12). Identical to Autophagy-related protein 12b (ATG12B) [Arabidopsis Thaliana] (GB:Q9LVK3); similar to ATG12a (AUTOPHAGY 12), protein binding [Arabidopsis thaliana] (TAIR:AT1G54210.1); similar to Putative autophagy-related protein 12 (GB:Q1SF86); contains InterPro domain Autophagy protein 12; (InterPro:IPR007242) Range:  from: 4613513    to: 4614855    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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