Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ALFIN1                                                              <---                  --------->ZAT14                                                        <-----------RAV1(1)       <----------DOF2      <<<<<<<<<TBF1                                               <---------TOE2(3) ----->GLK1(1)    <---------ZAT14                     <<<<<<<<<GATA-1                <---------AHL20(2) -----ARR14(2)   --------->AtMYB61                   <-----------GT1             <---------RVE1(1) ---->ARR14(2)   <---------ALFIN1                  <---------AHL20(2)<-----------GT1 --------->AHL20(2) -----GLK1(2) <------ZmHOX2a(1)               <-------TEIL    <-----------GT1    <---------CCA1(1)   tttgccagtctttataggaccacactcttcttcttcatcccccttacatacattttatctatttttacattttacaatattggatattttaatgttgttt  4608000                               <---------ARR11(3)                            --------->ARR11(3)       --------->ANAC46        --------->ARR11(3)                            <---------ARR11(3)      <---------------AGL15---------->DOF2                       <---------ALFIN1     --------->ZAT6     ------>ZmHOX2a(1)              <-----------GT1      --------->RVE1(1)   <-----------GT1     --------->TOE2(3)------>ZmHOX2a(1) <----------DOF2   --------->CCA1(1)       < ------YAB1     XXXXXXXXXXXXXXXXXXXX>MIR844        <----------DOF2 <<<<<<<<<TAC1         <----------DOF2   tgattttacactacatggcaaaactccttaaaagctcttgtcctgatgtgattcttttttcttttcaacactgtctaaatatctctctcttctttgtgat  4608100                        <-----------GT1             <-----------GT1                                                                       <-             <---------AHL20(2)                                                                   <--        --------->AHL20(2)                                                                  ---------        <---------AHL20(2)         --------->LBD16                                         --------->YAB1       <---------WOX13(1) <---------YAB1   <-----------GT1                                --------->ICU4  <----------DOF2   <---------YAB1--------->ANAC46      --------->ALFIN1                --------->YAB1 ---------DAG2  <----------DOF2  --------->ANAC46       ----------->GT1--------->YAB1----------->GT1   cactctttgatttattaactttctgattaccattccccccaaaataaaccctactagagtgtgactaattgtatagtaatctctattgtgtaataatctt  4608200                                                                                                 <---                                                                                  --------->ANAC58                                               <---------ZAT18         --------->STY1(2)     --------                              <---------AHL20(2)       --------->REM1(2)          --------->AtLEC2       ------>ZmHOX2a(1)      --------->AHL20(2)    <---------ANAC46   <---------STY1(2)     --------      --------->TOE2(3) ----------->GT1        --------->ZAT18        ------>MYB83--------->ANAC46 ----------GT1          <---------ANAC46    --------->ALFIN1 ---------->DOF2<---------ZAT6   <------- -------CCA1(2)   --------->DAG2    ---------->DOF2<------NtERF2      ------>MYB46(1)       ------->TEIL >GLK1(2)        ---------->DOF2  <---------AHL20(2)--------->O2  ------->TEIL    --------->ANAC58 <-   ttatctttcctcaatacaaaaaagtagggtatatatataaaagagggagtggcctcgtgtagagaaagaacctagctagtgttcatgcaatttgcatctg  4608300   <---------ARR14(2)   --------->ARR11(3)   <---------ARR11(3)   --------->ARR14(2) ------TOE2(3)                                                           ---------->DOF2 ->At4g35610                                                           <------ZmHOX2a(1)  *TSS     <- --->RAV1(2)                                              --------->GLK1(1)             --------->DAG2 --At4g35610 ---------->DOF2                             --------->ARR11(3)            ---------->DOF2 -----ZmHOX2a(1)                                         <---------ARR11(3)    ----------->HVH21 <---   aggaatatatgcttagaaagagagagagagagagagagagagagagagagagagagagagatatcaaaccagaggaaaagagtgacagagaaagtggtca  4608400                                                          <----------DOF2                         <------ZmHOX2a(1)             --------->ARR11(3)                        <---------At4g35610            <---------ARR11(3)                        --------->At4g35610        ---------->DOF2                      <-----------RAV1(2)        --------->ANAC58 ---------DOF2        <---------LBD16            --------->ANAC58           <---------YAB1         <- ------YAB1    --------->ANAC46             --------->WOX13(1)         <----------DOF2     ----------   tctttgtctgtctctgtccgaaactcaggagccctaatctctgaatccatcaagaaagctctttctcttccttcttttatgcttctgaatttgctacata  4608500                                                                                                   --                                                                                                   --                                                    <---------ANAC58                  ------>MYB83 <-                                                    <---------ANAC46                  ------>MYB46(1) <-----------GT1                                    <---------ANAC58                 ----------->RAV1(1) --------AHL20(2)                                  <---------LBD16<------ZmHOX2a(1) --------->AtMYB61 ----->AGL15 ---------->DOF2     <---------YAB1   --------->MYB52(1)             --------->ANAC46----   tataaactatctgaagaaagctagagaataagatgatgagtctaagtggaagtagcgggagaacaataggaaggcctccatttacaccaacacaatggga  4608600                                                            <---------At4g35610                                                       <---------TGA1a                                                       --------->ZAT2                                                       <---------ZAT2                                                       ----------->RAV1(2)                                                       --------->O2                                                       --------->TGA1a            --------->ANAC58                           <---------O2            --------->ANAC58                         <---------ALFIN1                      <---------HSFC1(2)          ---------->DOF2                         --------->PCF2                           --------->HSFC1(2) ------->ARR11(3)                                <-----------HVH21                 --------->HSFC1(2) ------->ARR14(2)                      ============================RAV  --------------->AGL15   <---- --------ARR14(2)                      <-----------RAV1(1)  --------->At4g35610    <---------HSFC1(2) ------->ARR10               <-------TEIL       ------>ZmHOX2a(1)       <---------------AGL15   <----   agaactggaacatcaagccctaatctacaagtacatggtctctggtgttcctgtcccacctgagctcatcttctccattagaagaagcttggacacttcc  4608700                               --------->ANAC58                               --------->ANAC58                             <---------MYB52(1)                            --------->LBD16                           --------->ANAC55(2)                           <---------ANAC55(2)                           --------->ANAC46                          <---------LBD16                       ------>MYB46(1)                      <----------DOF2                       ------>MYB83                     <----------DOF2             --------->DAG2                     --------->MYB46(3)              <-----------GT1               ---------->DOF2                     --------->AtMYB61          <---------AHL20(2)          <---------ANAC58 -----ANAC58     ------>ZmHOX2a(1)            --------->TOE2(3)             <---------ANAC58 -----ANAC58 ------>ZmHOX2a(1)--------->SPL7  --------->ANAC55(2)       <----------DOF2        <-----   ttggtctctagactccttcctcaccaatcccgtaagccctatacctatacttaattttctttctttcatgttttcttttcttgcataaagtttcaatctt  4608800                             <----------DOF2                                                 <-------                 ---------->DOF2                              ---------->DOF2          ------->GAMYB               <------NtERF2 <---------DAG2        <------MYB83           <----------DOF2    <-------   <---------GLK1(2)       <---------At4g35610     <------MYB46(1)        <---------DAG2  <---------ALFIN1 -----DOF2    ------>NtERF2--------->At4g35610--------->ATHB12<---------DOF5.7(2)     --------->MYB46(3)   ttgttgattctcatgcccccaaagttttcagctttatgtgttttagagtgatttggtttctggttaaagtctctagctttttttttcaacgaccactttt  4608900  Previous    Next  AGI:  At3g13960.1    Description:  AtGRF5 (GROWTH-REGULATING FACTOR 5). similar to AtGRF6 (GROWTH-REGULATING FACTOR 6) [Arabidopsis thaliana] (TAIR:AT2G06200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45632.1); contains InterPro domain QLQ (InterPro:IPR014978); contains InterPro domain WRC (InterPro:IPR014977) Range:  from: 4608390    to: 4610406    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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