Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ANAC58                                            <---------ANAC58                                        <---------ANAC58            ------>MYB46(1)             <---------ANAC58            ------>MYB83               <---------ZAT2            -------->P                 --------->At4g35610                          ----------->RAV1(2)          --------->MYB46(3)           <---------At4g35610<---------ICU4           ------>NtERF2    < --------->AHL20(2)                    --------->ZAT2    --------->ICU4--------->ANAC58             - -GT1     --------->AtMYB61     <---------AtLEC2----------->RAV1(2)    --------->ANAC58    <------ZmHOX2a(1)   ctattaaaaacaccaactctataagtattcgtctgcatagcagcttgctcgcctgtgtaattagttccgacgaactcaactcttgcgcctggaggactta  4602100                                                                                       ------>ZmHOX2a(2)                                                                                       ==============        <---------ARR14(2)                                                           --------->ARR14(2)        --------->ARR14(2)                                                           --------->ARR11(3)    --------->TOE1(3)             <---------ANAC58                                   <---------ARR11(3)    --------->TOE2(3)             <---------ANAC58                                   <---------ARR14(2)   ----------->RAV1(2)          <---------YAB1                             <-----------------AGL3  -------->P------>ZmHOX2a(1)------>ZmHOX2a(1)                            <---------ANAC58 ------->GAMYB              --------->TOE2(3)                             <---------ANAC58 <--------- ---------MYB111(2)       <---------YAB1                         ------->TEIL        <---------AGP1 -------->MYB46(3)      --------->YAB1                     <-------TEIL   <---------ANAC46 <---------DAG2   caacaacctgaatcctcttcttagaatcatccttatgcttgtaaacagtaaccttgggagtttcatgaactctcttgcctgtttttggatctactttaca  4602200                                                                 ----------->HVH21                                                               <---------ANAC46                                   ----------->ARR10           <---------ANAC55(1)         ===========================HOX2a_HOX2a                --------->ANAC55(2)         ------>ZmHOX2a(1)    ------>ZmHOX2a(2)                <---------ANAC55(2)     <---------ARR14(2)      <------ZmHOX2a(2)                 <---------ANAC58     --------->ARR14(2)  <------NtERF2--------->GLK1(2)        <---------ANAC58    <---------CCA1(2)   ------>NtERF2<---------GLK1(2)         <---------AtLEC2  ------>ZmHOX2a(2)    <---------DEAR3(1)                ------>NtERF2  ==============HOX2a_HOX2a --------->ARR14(2)          --------->DEAR3(1) ===============HOX2a_HOX2a <---------ARR14(2)         <------NtERF2 <----------DOF2    ---------->ID1 -DOF2   ============================HOX2a_HOX2a     <---------DEAR3(1)       <-----------GT1 -------   aggatcgtatcctgtagagaaataggcgacgatcggagagattctatcgggtctctcggcgacttgcgtgactttgagagtaactctcttgtcttcttcg  4602300                                                                                                <----                                         <---------ANAC58                                      ------                            <-----------GT1                                                   <------                           <-----------GT1                             --------->ARR11(3)     -------                <---------MYB52(1)       <---------ANAC58              <---------ARR11(3)    <-------               <-------GAMYB---------->ID1                    <---------ANAC46               --------              <---------ANAC58       <----------DOF2       <---------AtMYB61                 <-------      ------>ZmHOX2a(1) <---------AHL20(2)   <----------DOF2<---------ANAC46               --------->YAB1 --->ID1      <---------ANAC58  <----------DOF2       <---------MYB46(3)         ------>ZmHOX2a(1)   ttttcatcctctgtttccgttgctatttttttccctttcctttgcttcttttgtagttgttgtggtgtattgaaatcttcttcctcgtttctataatcat  4602400 -----YAB1                                                  <---------At4g35610 --------------->WRI1                                       <------NtERF2 ---ICU4                                                  <---------DEAR3(1) -->YAB1                                                 <------NtERF2 --ATHB12                           <----------DOF2      --------->ATERF1(1)     <---------HSFB2a(2) ->ICU4                 <---------TOE2(3)             --------->At4g35610        --------->HSFB2a(2) --YAB1      <---------AtLEC2   <---------GLK1(2)  ---------->DOF2           <---------ZAT14 *TSS   tcttctcttcgccttccatggctactgaggtttggattcttttagtctatcgaagaagcggcagcgattcagagaagggtttactggaaactcactaaat  4602500                        --------->HSFB2a(2)                        <---------HSFB2a(2)                       <---------LBD16                  <---------YAB1             <------MYB83           <---------ANAC55(2)             <------MYB46(1)        --------->ANAC55(2)            --------->MYB59       <-----------GT1      <---------------AGL15   <---------AHL20(1)     <-----------------AG     <---------AHL20(2)     --------->TOE1(3) <---------ANAC46                                    <---------ARR11(3)     --------->TOE2(3)<---------LBD16  --------->MYB52(1)                  --------->ARR11(3)     <-----------------AGL3   --------->AHL20(1)      <---------ANAC58    <---------GLK1(1)     ----------------->AGL2   --------->AHL20(2)      <---------ANAC58    --------->GLK1(1)     ----------------->AG--------->LBD16  ------->GAMYB              ---------->DOF2   gcttaaaccctaatttggttatgtttcgggaatttattacataacagacccttgttgtttgtccgagtcgataaagaaatcttcacagtttttttttttg  4602600                                   <---------MYB52(1)                                 ----------->GT1                              --------->ANAC46                                                    <--                          <------ZmHOX2a(2)                                                       ---                          --------->CCA1(2)                  --------->GLK1(2)                    ---                         <---------ARR11(3)              --------->ANAC46                         ---                         <-----------ARR10               --------->ANAC55(2)                      <--                         --------->ARR11(3)              <---------ANAC55(2)                      ---                         --------->ARR14(2)       --------->ANAC46                    --------->At4g35610                         <---------ARR14(2) --------->O2 --------->ANAC58  <---------DAG2    --------                         --------->AGP1     <---------ANAC46<---------GLK1(2)         <---------At4g35610         <---------AHL20(2)   <---------ALFIN1   <---------LBD16           <----------DOF2   <-------         --------->AHL20(2)------>ZmHOX2a(2)<---------O2 --------->ANAC58 <---------ANAC58   --------      <----------DOF2---------->DOF2   <-----------GT1  <---------LBD16   <---------ANAC58   --------   accccaaacttttaatttgtttagaaagatctacaccgttataacgacgtctacggactacggaatctaaaccctggctttttctcttagctaaaacgac  4602700 -------O2 ------>ANAC58                                <------ZmHOX2a(2) ------>ANAC46                               --------->ARR14(2) ------>ANAC58                               --------->ARR11(3) -------ANAC55(2)                            <---------ARR14(2) ------>ANAC55(2)                            <---------ARR11(3)             <-----------ARR10 ->ANAC46                                ---------->DOF2         -------->P --------->GLK1(2) ---ID1----------->RAV1(2)     --------->ANAC46                ------>ZmHOX2a(2)                 <--- ->ANAC58                      --------->ANAC58       <-----------GT1  ---------->DOF2      --------- ->ANAC58----------->HVH21     --------->ANAC58------>ZmHOX2a(2) ------->TEIL            <----------DOF2   acgtagttcgcctgaaacttagaaaacaaacacacgctgtttgcaaagatcccaatttacattgatctacctccaaagtatctaaactcttctttaaagc  4602800                                                                      <---------HSFB2a(2)                                                                      --------->HSFC1(1)                                                               <---------YAB1                                                             --------->YAB1                                                        <---------ICU4<---------HSFC1(1)                                                        <---------AHL20(2)     --------->bZIP60(2)                      <---------ARR11(3)      --------->HSFB2a(2)   ----------->RAV1(1)                        --------->ARR11(3)<---------ICU4 -------DOF2        <---------TOE2(3) <---------GLK1(2) --------->AHL20(2)                       ---- ->DOF2        <----------DOF2<-----------GT1--------->YAB1<-----------GT1                   --------   tttggccacataaccttcttttaagttttttttaactatggattctattatcttctaattttttcatcatttctagaccaagtttctatgctggaacaaa  4602900                           --------->TOE2(3)                        <---------GLK1(2)                    <---------ANAC46                       ------>MYB46(1)                       <---------ANAC55(1)                       ------>MYB83                    <---------TOE1(3)                    --------->ANAC46                   <---------TOE2(3)                 --------->ZAT18                      <-----------RAV1(2)                 <-------TEIL                    <---------RVE1(1)               --------->YAB1                 --------->ZAT14                 <---------CCA1(1)            --------->bZIP60(1) ------->GT1     <---------ZAT18                <---------ARR11(3)            --------->GLK1(1)     < ->MYB46(3)------>ZmHOX2a(2)                    --------->ARR11(3)            <---------bZIP60(1)<---   tgtaaaattttgatccaagtacaccaaattcttagttcgtttttaatatagatatttcaggttaagtgtatattggactgatatcatcacaactagtttt  4603000  Previous    Next  AGI:  At3g13940.1    Description:  DNA binding / DNA-directed RNA polymerase. similar to unnamed protein product [Vitis vinifera] (GB:CAO45674.1); contains InterPro domain RNA polymerase I associated factor, A49-like; (InterPro:IPR009668) Range:  from: 4600499    to: 4602493    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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