Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->MYB46(3)                      --------->ANAC58                      --------->ANAC46                      --------->ANAC58                                          --------->AHL20(2)                   --------->MYB46(3)                                           --------->AHL20(1)             <-----------GT1                                                    <---------AHL20(2)          <---------AHL20(2)                                                   --------->AHL20(2)         <---------AHL20(1)                                                    <---------AHL20(2)         <---------AHL20(2)      --------->REM1(1)                        ===========================         --------->AHL20(2)    ----------->RAV1(1)                        ------>ZmHOX2a(1)         <   --------->TOE2(3)<---------ALFIN1   --------->AGP1                    --------->TOE2(3)    <------ ---->AHL20(2)   --------->ANAC46<---------ALFIN1          ------->TEIL<------ZmHOX2a(2) ----------->GT1   aaaaaccacaatttttttccctccacccaattgcaacaccagagctattagcctgattttgaatctaaaatcgatcctaaattaaattgcattgaaaaaa  4558200                --------->ANAC58            ------->GAMYB           --------->MYB46(3)         <-----------GT1    <----------DOF2   ------>ZmHOX2a(2)                <---------WRKY18(1) <---------AGP1 --------->ANAC58   --------->WRKY12 --------->ARR11(3)             --------->ATHB12   <<<<<<<ZML2 <---------ARR14(2)     --------->GLK1(1)       <---------HSFB2a(2) --------->ARR14(2)   ------->GAMYB--------->WRKY38(1) <---------ARR11(3)--------->MYB52(1)        --------->GLK1(2) =========HOX2a_HOX2a--------->ANAC46       <---------GLK1(2)     <----------DOF2            -------- ---------CCA1(2)<---------ATHB12 <---------WOX13(1)        <----------DOF2                 <<<<<<<<<ARR2 ---AHL20(2)--------->TOE2(3)  <---------ATHB12 --------->HSFB2a(2)   <---------------AtSPL8<--------   ttggatctttttaaccacaatcaacgaaatccattcattgaccaaagaatctagaacatgggctataactttgtagtaccaagagcgaaatacaatcaaa  4558300                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)              --------->MYB52(1)            <---------ARR11(3)       --------->ANAC46                 --------->YAB1--------->ARR14(2)       --------->ANAC58                --------->ICU4 <---------GLK1(2)      ------>MYB83                   --------->WOX13(1)--------->GLK1(2)      ------>MYB46(1)             --------->ANAC58    <---------ARR14(2)      <---------------------WRI1  --------->ANAC58 --------->HSFB2a(2)    --------->AtMYB61        >>>>>>>>>TBF1  --------->ARR11(3)    --------->TOE1(2)    ============================HOX2a_HOX2a                       <------ZmHOX2a(1)    --------->TOE2(2)    ===========================HOX2a_HOX2a     ---------->DOF2  <---------TOE2(3) ->YAB1--------->ANAC58  <------ZmHOX2a(1)<---------YAB1----------->RAV1(2)   <---------AHL20(2)    - -ATHB12    <---------MYB52(2)  ---------->DOF2    <---------HSFB2a(2)    <----------DOF2    --------   aatccacctacgaaactaacaatgctaggaagaagaaagcaattaagatcgtttcagaacctgagcaaaaaaaagtctttttaatctgaggaaaacaaag  4558400       <---------ARR11(3)       <---------ARR14(2)                                                                        <---       --------->ARR14(2)                    --------->TOE2(3)                                   ----  <------NtERF2                              ------->GAMYB                                    <------ ------>NtERF2                               --------->YAB1                             <---------TOE2(3) ----------->RAV1(1)                        --------->MYB46(3)                          <---------TOE1(3) ---------->HVH21    --------->YAB1     <-------TEIL               ---------->DOF2     ============== -->DOF2<----------TaMYB80      <----------DOF2         <-----------GT1                <-----------RAV1(2)   aggcgacagtatattcgattcaataagagtattcctttgagattcaaccaaaatcaattttcagtctaataaagtttgaaactttcgattcaggttatgt  4558500                                                                                                    <                                                                                                   --                                                                                                  ---                                                                                         --------->TOE1(3)                                                                                         --------->YAB1                          <-----------------AGL1                                         --------->TOE2(3)           <-----------HVH21                <------NtERF2                               <<<<<<<<<ARR2        <---------At5g28300                ------>NtERF2                                <<<<<<<<<ARR1 ------ANAC46    <---------ZAT18          ----------->HVH21                             XXXXXXXXXXXXX ----->ETT(1) ---------->DOF2        <---------ARR14(2)                               *TSS        --- -----RAV1(1)<---------WRKY12        --------->ARR14(2)                            <-----------GT1<-- =====RAV --------->DEAR3(1)------>ZmHOX2a(1)            ------>ZmHOX2a(1)      ----------->GT1------   cggaaaaactcaccgtcaatgcgcttgttcctctcttggtatcggcgacaacttctctccttctcagaaaatgctaccgagtttgtaacaatcttaaacg  4558600                             <------NtERF2                            ------>NtERF2                           <---------ANAC46                        --------->ATERF1(1)    --------->WRKY12       <---------DEAR3(1)                      <------NtERF2    --------->WRKY38(1)    --------->DEAR3(1)                     <---------ATERF1(1)   <---------MYB52(1)    <---------RAP2.3(1)                     --------->DEAR3(1)  <-------GAMYB         --------->ANAC46                         <---------DEAR3(1) ------NtERF2          <---------At5g28300                     <---------RAP2.3(1) ---->NtERF2          --------->MYB52(1)                     --------->SPL7                         < ------>ANAC46      <---------DAG2                           <---------At5g28300             <------- XXXXXXX>MIR4228    <----------DOF2        --------->YAB1 <---------ANAC58          <---------MYB52(1) ------>DEAR3(1)   <---------ANAC58        <---------ICU4 <---------ANAC58   <----------DOF2 <------- -------DEAR3(1)   <---------ANAC58    --------->ZAT6  <----------DOF2 <----------DOF2 <---------YAB1 --->ANAC46    <----------DOF2 <---------DEAR3(2)  <----------DOF2------>NtERF2    <-------GAMYB  <--   acgccgttgacaaaatactttgctttacggcgtcgtttcaaacactaatgacactttctttcttacggcgtcgctttcgcttctccgttataaatacttg  4558700                                               ------->TEIL                                         <-----------GT1 --------->ARR14(2)                     <---------ZAT14                                           <-- ---------MYB52(1)                      --------->ZAT14         <<<<<<<<<MYB98              --------- --ANAC58                            --------->TOE2(3)       <---------TOE2(3)             ---------- --ANAC58<---------ANAC46         ----------->RAV1(1)      <---------AHL20(2)              <--------- -------ANAC46                   --------->MYB46(3)  --------->YAB1  --------->YAB1     <-----------GT1   ccgtttatgcgtcgtattaagcacttgaatttccaacaacattatactgtatgtaacataatttatgttactcatgaacacaagtttttgttactgattt  4558800                            --------->At4g35610                       --------->bZIP60(1)                       <---------TGA1a                       <---------bZIP60(1)                       ==================bZIP_DOF                       <---------ANAC46                  <---------ANAC58                  <---------ANAC46              --------->ZAT14 --------->CCA1(2)<---------ANAC58 -------TOE2(3) <---------ANAC46 >ATHB12      <---------ZAT14 <----------DOF2               ------->TEIL                  ---------->DOF2 ----->AGL15 <-----------RAV1(1)         --------->MYB46(3)<---------AtLEC2      <---------ANAC58 ------AGL15 <---------ZAT6 <---------At4g35610     <---------AtMYB61            <---------ANAC58   gagataaacgaactagtgttgtgtgatgtgagctttgcatacaacaacttagttttggtttgcatctctattagttttagttttcttgttttaaaagcta  4558900                                                                        --------->ANAC58                        <---------ANAC58                        --------->GLK1(2)                        <---------ANAC58                        <---------ARR14(2)                        <---------ANAC46                        --------->ARR14(2)                    ------>ZmHOX2a(2)                         <---------HSFB2a(1)                  <---------ARR11(3)                          --------->HSFB2a(1)                  --------->ARR11(3)                          <---------HSFC1(2)             --------->ATHB12                                 --------->HSFC1(2)             <---------AHL20(2)                        --------->At4g35610<---------ZAT18            --------->AHL20(1)                         <---------ZAT2   --------->ANAC46        -----            <---------AHL20(2)                      ---------->DOF2     --------->ANAC58    ---------            --------->AHL20(2)                    --------->ANAC58 <----------ID1         -----------            <---------AHL20(1)                    --------->ANAC58 <---------ETT(1) ---------->DOF2   tttgctgatgggaatttattgatcttgtgtgttagactgtggataaacagaaacgaaagctggaagaatccgacaaggcactcgaacaaagaaggtgaca  4559000                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                    <------ZmHOX2a(1)                                              ------>ZmHOX2a(1)                                           --------------->AGL15          <-----------GT1                                          ------>ZmHOX2a(2)      --------->MYB52(2)       <---------TOE1(2)                  =================HOX2a_HOX2a <---------ZAT6 ---->ARR11(3)                           <---------GLK1(1)     <---------MYB52(1) -->HVH21                               <---------ARR11(3)    --------->TOE2(3) >GT1 ------>ZmHOX2a(1)                 --------->ARR11(3)   --------->ANAC46    <-----------GT1   tcttgttcctaagtttgtttcttcaatgttctcatggaatttgatctccttataggaacatctacgttagtcagtgttacatttttcttcttgagttaca  4559100  Previous    Next  AGI:  At3g13845.1    Description:  unknown protein Range:  from: 4557328    to: 4558586    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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