Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                                                                                              <------                                              --------->DAG2                                 <-------                                             ---------->DOF2                                 <-------                                          <---------ANAC55(2)                                --------          <---------ANAC55(2)      <---------ANAC58                                          -------- -------ZAT18                      <---------ANAC58           <-------TEIL        ----------->GT1 ------>ZAT18      <-----------HVH21  <-----------HVH21   <---------YAB1     >>>>>>>>>>GT-3b <------- >YAB1    --------->ANAC55(2)      <---------ANAC46    <---------AGP1 ----------->GT1     --------->AHL20(2)   tggaccataaataagtatttatgtcacatatgtttttgtgtgtcacataaagtagtagttctgattcatgaagagtaagaaaaatagtgaaataatatat  4544100                          --------->AHL20(2)                      >>>>>>>>>>GT-3b         --------->HSFB2a(2)         <---------HSFB2a(2) ----ARR11(3)   --------->TOE1(2)                                                     <---------ANAC58 --->ARR11(3)   --------->TOE2(2)                                                     <---------ANAC58 ---CCA1(2)    <---------ANAC55(2)                                         <----------DOF2 --AHL20(1)    ----------->GT1                                          --------->ANAC58 --AHL20(2)    --------->ANAC58               --------->ATHB12          --------->ANAC58 ->AHL20(1)    --------->ANAC58              <---------AHL20(2)     --------->HSFB2a(2)         ----- ->ARR11(3)    --------->ANAC55(2)       <---------AHL20(2)     <----------DOF2  --------->ANAC46 --ARR11(3)   <-----------------------TaNAC69(2)    ---------->DOF2 <---------HSFB2a(2)       -------   ctactgcttatcgagaaacgtaagaaaaataaaaactatagttttaattcattgcaaagacgacctctttctgcaagctttccacagagcttgtgagaaa  4544200                                                                               <---------ZAT14                                                                             --------->ZAT18                                                                        ---------->DOF2    ----------                                                                 --------->LBD16        --------->YAB1                                          <---------YAB1        --------->ANAC55(1)     -------->HAHB4                  <------NtERF2        <---------AHL20(2)       <---------ANAC55(2)    <---------YAB1      <-----------GT1                  --------->AHL20(2)       --------->ANAC55(2)    --------->ICU4     <-----------GT1 <---------MYB52(1)--------->AHL20(1)       --------->ANAC46  --------->ANAC58 <---------YAB1  ------>NtERF2         <---------AHL20(1)       --------->ANAC58  --------->ANAC58 ------>GT1  <-----------GT1--------->ANAC46 <---------TOE2(3)  --------->ANAC58<-----------RAV1(2)<- --->DOF2<----------DOF2  <-----------GT1--------->AHL20(1)    <---------LBD16--------->ALFIN1 ------   gttatatttatctttttgccaccgttttttacgaaaactaaaatattatggatttttgtttttaatacggaaaacaaagtgtgcaggtaatgataaagaa  4544300                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                             <----------DOF2<--------     <---------WOX13(1)                                                    <XXXXXXXXXXXXXXXXXXXMIR156H >DOF2                 <----------DOF2                                 <------MYB46(1)      <-------- -----ZmHOX2a(1)       <---------DAG2     --------->At4g35610          <------MYB83         --------- ---->DOF2    ----------->GT1        ---------->DOF2                 <--------P           --------->WOX13(1)   aggacagattgctaagaagaaaatacttttttttttttttaaagagcagaaaatgccagtttttcttagcggtagggttcttttttttttgtcaattatt  4544400  <---------AHL20(2) ----->AHL20(2)                                     --------->AHL20(2) ------AHL20(2)                                     <---------YAB1 ------AHL20(1)                                     <---------AHL20(2) -->AHL20(1)                                       <---------AHL20(2) --ICU4                                            --------->AHL20(2) ->ATHB51                                          --------->AHL20(1) -HAHB4                                            <---------AHL20(1) >ATHB1                                         --------->AHL20(2) ->AHL20(2)                                   <---------ARR11(3)               <----------DOF2 --AHL20(2)                               <------ZmHOX2a(1)          <---------GLK1(2) ->YAB1                                --------->CCA1(2)           ------------>CBF -ATHB12                  <---------ARR14(2)  --------->ARR11(3) <---------ZAT18 -ATHB51                  --------->ARR14(2)----------->GT1      --------->ZAT18                 *TSS >ICU4         <-----------GT1       --------->CCA1(2)XXXXXXXXXXXXXXXXXXXX>MIR413      <---------ALFIN1   ttatttcatttttgaattttcggtttcaaatactcagagagataggaagataatataatttctcttgtccacaatctctctctttctcccctctctctct  4544500                                                                                         ---------->ID1                                                                                       <-----------RAV1(1)                                                                                ----------->GT1                 --------->GLK1(1)                                            --------->REM1(2)                 <---------GLK1(1)              --------->AHL20(2)            <---------ZAT14  <---------HSFB2a(2)                 <----------DOF2                         --------->ZAT14    <---  --------->HSFB2a(2)       <----------DOF2     <---------AHL20(2)         <---------ANAC46     <----   acttctaggtatattggagatttcttccatcttttgttttcttttgtagtttaatttctcaacttcttgttcatgttctgtgtagtaatttgttgctacc  4544600                                                              <---------ARR11(3)                                                              --------->ARR11(3)                   <-                         <---------ANAC58                   ----------->ARR10                    ----                         <---------ANAC58          ---------->DOF2                              -----                         <---------ANAC55(1)    --------->ANAC58                     ---------->DOF2- -------DOF2             <---------ANAC46       --------->ANAC58                   ----------------->AGL1 -----DAG2            <XXXXXXXXXXXXXXXXXXXXMIR863-3P--------->DAG2          <-------GAMYB       -----   ttttattttgttttctgtgagattatttcgtgttgatttcaaacttgaacaagaaaagtggatagatattgtctcttgggttgaagccaaagaaggaaat  4544700       <-------TEIL   <---------AHL20(1)   --------->ARR11(3) --------YAB1 ----->YAB1                       ---------->DOF2           <---------AHL20(2)     <---------ANAC46 ------>GT1             --------->ANAC46                    --------->AHL20(2)     <---------ANAC58 -------->AHL20(2)      --------->ANAC58                --------->AHL20(2)         <---------ANAC58 ---->ICU4 <-------TEIL --------->ANAC58             <------ZmHOX2a(1)          <---------CCA1(2)  <-   gataatatatacatacacacacacacacacaaaaatcaaagaaggaagttttataggattatatatatagctagagagtctcatttcttgtatgtttctg  4544800                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                             --------->CCA1(2)                                                            --------->ARR14(2)                                                            <---------ARR11(3)                                                            <---------ARR14(2)                                --------->ARR14(2)          --------->ARR11(3)                                <---------ARR14(2)   <---------AHL20(2)                           <---------YAB1            --------->AHL20(2)                   <----------DOF2               --------->AHL20(2)              ---------->ID1--------->ZAT6       <---------AHL20(2)         <----------DOF2  <-----------GT1     ------->TEIL  <---------AGP1 --------AHL20(2)  <---------DAG2         ------->TEIL      --------->AGP1  ---------->ID1  <--------   tttaatcttctcttttgtctcctttttttatcagtatatgtctgtatgtatttatatatatagatctgaatatagtttgtcgatttctaacttatttcgc  4544900                                                                                    ------->GAMYB                                                                                    --------->TOE2(3)                                                                                    --------->AtMYB61                                                                                   --------->MYB46(3)                                                                                  -------->P                                                                                --------->MYB46(3)                                                                               <---------At4g35610                                                     ---------->DOF2           --------->At4g35610 <-   <---------YAB1     <----------DOF2        --------->ICU4    <-----------GT1--------->ANAC46     -- ---GT1  <----------DOF2  <---------TOE2(3)  <---------YAB1 ----------->GT1 --------->At4g35610    --   ctcttcttattcttttgttttttgctttaagtttttttttttgtgtgatgatgaacaaagacatgttacttcaccagcatcagcaaccacaacaagacga  4545000  Previous    Next  AGI:  At3g13810.1    Description:  ATIDD11 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 11); nucleic acid binding / transcription factor/ zinc ion binding. similar to ATIDD7 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 7), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G55110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79105.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 4544497    to: 4547417    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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