Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ANAC55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC55(2)       --------->ZAT18                                                             --------->ANAC55(1)       <---------ZAT18                                                             --------->ANAC46       <---------ZAT14                                                             --------->ANAC58       --------->ZAT14                                                          <---------ARR14(2)   <-----------RAV1(1)--------->At5g28300                                       --------->ARR14(2) ------->MYB46(3)     --------->LBD16                                        <---------ANAC55(2) --------MYB52(2) <---------ALFIN1                                  <---------ARR14(2) ------->RAV1(1) --------->ETT(2)         <---------At4g35610       --------->ARR14(2)     --------->ALFIN1 -->ANAC46       --------->ZAT14        <---------WRKY38(1)      --------->HSFB2a(2)   --------->SPL7 -->AtLEC2       <---------ETT(2)       <---------WRKY12         <---------HSFB2a(2)  --------->MYB52(1) -->ANAC58       <---------ZAT14      <-----------HVH21  ----------->RAV1(2) <---------ANAC46 -->ANAC58  --------->ZAT14       <---------LBD16       ------>NtERF2 <-------TEIL<---------LBD16   aacaaatgctgcactactgtccaccgtgaatgcttattcgggtcaactgtttatatgcagcctggttccagattcaactacgtatacggaacggtggaag  4519300                                                             <---------ANAC58              --------->MYB52(1)                             <---------ANAC46           --------->YAB1                                    <---------ANAC58        ------->GAMYB                                     --------->GLK1(2)               ------->GAMYB       --------->MYB46(3)                                <---------GLK1(2)               --------->MYB46(3)     ----------->RAV1(1)                                 <---------ARR14(2)              --------->DEAR3(2)   --------->LBD16  <---------ZAT14                <---------ZAT18                       <---------MYB55(2)  --------->ANAC58  <---------ETT(2)               --------->ZAT14                       <---------MYB52(2)  --------->ANAC46  --------->ZAT14                --------->ZAT18                     --------->MYB52(1)  --------->ANAC55(2)                              <---------ZAT14               --------->ANAC46  --------->HSFB2a(2)           <---------ANAC46<---------ANAC58        <---------At4g35610  --------->ANAC58  --------->ETT(2)       <---------YAB1--------->ARR14(2)    --------->REM1(1) <---------LBD16 ------->GAMYB ---------->ID1   <---------ANAC58     <---------ZAT14   ----------->RAV1(1)   ttttccgcaacagtcataacagtcgactggtttgtcgtaaatgttttcattcgtgcacagattccgtctacttcagaggctacaagtcccaacagacgtt  4519400                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                              <------MYB46(1)                                                                              <------MYB83                                                        --------->ZAT6       --------->MYB59                                                 ----------->GT1             --------->MYB111(1)                                             <---------WRKY18(1)            <---------MYB55(1)                                            --------->WRKY38(1)             <--------P                  --------->At4g35610       ----------->HVH21              <---------MYB52(1)                 --------->ANAC46           --------->WRKY12             <---------HSFB2a(2)    --------->AtLEC2                      <----------DOF2                --------->HSFB2a(2)   tatttcatacaaaggctacgagcagcatgagatggctatttgttctttgacctgtttaaaactagagatgctcttctggtaggtcttaatgcaacttctg  4519500                         ---------->DOF2                       <---------MYB59                        --------->YAB1                <--------                       --------->TOE2(3)         ----------->GT1                   <---------AtLEC2 -                  <----------DOF2            --------->ARR11(3)   <---------AHL20(2)   ---------->DOF2               <---------YAB1          <---------YAB1 --------->REM1(1)       <----------DOF2  <-----   tttagctatgtaatgttatgctttacctaaagactacaagtatgttagatgttgttacatctattcatattatttgaagacttttgcataaaagttactt  4519600                                           <------ZmHOX2a(2)                                        -                                          --------->ARR11(3)                                       <-                             <-----------RAV1(1)                                           <---------ATERF1(1)    <----------DOF2          <---------MYB46(3)         <-----------GT1           <----------DOF2  -- ---GT1  <-------GAMYB    <---------ARR11(3)------>ZmHOX2a(2)                    ------>ZmHOX2a(2) <- --------->ID1            --------->ARR11(3)----------->GT1                    <---------ARR11(3)  <- -----DOF2      ----------------->AGL3    <---------ARR11(3)                   --------->ARR11(3)----   ttgtttctttctgttgaaaccattaaaagatttgttggatttgagatcgtcaaatgtttaacttgatgagactaattcatcgatctttctcgtcgtctcc  4519700                                                                                                  ---                                                 ------->GAMYB                                -------                                                --------->MYB46(3)                           -------- ------>GAMYB                                 --------->MYB52(1)                        <------MYB83 --------MYB52(2)                       <---------YAB1                                  <------MYB46(1) ------->MYB46(3)                     <---------ICU4                                   --------->MYB111(1) --------MYB55(2)                     --------->YAB1              <----------DOF2      --------->MYB46(2) --------MYB111(2)                   <---------ATHB12      <---------HSFB2a(2)         --------->MYB59 ------->RAV1(1)                     <---------ATHB51      --------->HSFB2a(2)       <---------MYB52(1)   aacaaactatgttcttcaaaccattcttccaatctctcaattatgctccaacggtcgtcttcaagaagctttactggagatggcgatgttaggtcccgag  4519800                               <---------ANAC58                               <---------ALFIN1                               --------->ANAC55(2)                     <-------TEIL <---------ANAC58              <---------ANAC55(1)              ---------->DOF2 <---------ANAC58              <---------ANAC55(2)             <---------WRKY12                     < ------>ALFIN1                 <---------ANAC46                <---------WRKY45                  ---- -->LBD16                      <---------ANAC58                <---------WRKY38(1)             <----- ->LBD16            <----------DOF2        ---------->DOF2    --------->WRKY18(1)            --------   atggggttccatggttacgatgctttgttgaatgcgtgtttggacaaaagggctcttagagatggtcaaagagttcatgcccacatgatcaaaacccgtt  4519900              --------->TOE1(2)          <---------MYB111(2)       <---------ALFIN1     --------->LBD16     ------>NtERF2    --------->ANAC46    --------->ANAC58                                                        --------->ZAT18    --------->ANAC58                      --------->At5g28300           --------->DAG2   <---------LBD16                       ----------->GT1            --------->ANAC46   --------->MYB46(3)                    --------->YAB1             --------->ANAC58 -------->P -------->P                  <---------TOE2(3)           --------->ANAC58 -----------GT1             --------->At4g35610                    ------->TEIL ----->MYB52(2)             <---------At4g35610     <---------WOX13(1) ---------->DOF2 ----MYB52(1) --------->TOE2(2)  <-----------------AGL1       <------ZmHOX2a(1) --->GT1  <---------MYB111(1)  <---------CCA1(2) <---------YAB1    <---------LBD16--------->ANAC46   atttacccgccacttacctccgaactcgtctgcttatcttctatggtaaatgtgattgtttagaggatgcacggaaagtgctcgacgaaatgcctgagaa  4520000                      --------->ARR11(3)          =====================HOX2a_HOX2a          ------>ZmHOX2a(1)          --------->LBD16         <---------LBD16        ----------->RAV1(2)        <---------ANAC46                                                                   --------->At4g35610      <---------ARR14(2)------>ZmHOX2a(2)                                                <-----------RAV1(2)   <---------ANAC58   <---------ARR11(3)            ----------->RAV1(2)                 <------ZmHOX2a(2)   <---------ANAC58  --------->YAB1                 <---------At4g35610         --------->ICU4   gaatgtcgtttcctggactgctatgatctcgcgttattctcaaactgggcattcttctgaggctctcactgtttttgcagagatgatgagatcagatggg  4520100                                                         <------MYB83                                                         <------MYB46(1)                                                        <---------AtMYB61                                                        --------->MYB59                                                        --------->MYB46(2)                                                      <---------MYB52(1)                                                      <<<<<<<<<MYB98    --------->ARR14(2)              <----------DOF2                        <-----------HVH21  <---------ARR14(2)          <---------ZAT14                 --------->ANAC55(2)          --------->GLK1(1)          --------->ZAT14                 <---------ANAC58         --------->ANAC58          <---------ZAT18                 <---------ANAC58--------->ARR11(3)               <---------ANAC46          --------->ZAT18    <-----------GT1   <----------DOF2     --------->ANAC58--------->YAB1  <-   aaaccgaatgagttcactttcgctactgttcttacttcttgtatacgtgcttctgggttaggtcttggtaagcaaatccatggactcatagttaagtgga  4520200  Previous    Next  AGI:  At3g13760.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G17600.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G35610.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G11402.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 4517524    to: 4519482    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g13770.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G57430.1); similar to Os06g0613100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058069.1); similar to hypothetical protein OsJ_021113 [Oryza sativa (japonica cultivar-group)] (GB:EAZ37630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23531.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 4519654    to: 4521540    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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