Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------RVE1(1)     <---------CCA1(1)                                                         <---------REM1(1)    <---------ARR11(3)                                            --------->YAB1    --------->ARR11(3)                                           <---------ATHB12    <---------GLK1(2) --------->SPL7                            ------>MYB46(1)<---------bZIP60(2) --------YAB1       <---------SPL7                              ------>MYB83   <---------O2 ----->YAB1        --------->TOE2(1)                     ---------->DOF2       --------->ALFIN1 -----YAB1         --------->TOE1(1)              --------->ARR14(2)    --------->DAG2 ->ICU4           <---------------AtSPL3          <---------ARR14(2)   ---------->DOF2 --YAB1<---------AHL20(2)                  ---------->DOF2     --------->WOX13(1)             <------   tatgaagattttttttttatctcgtaccgatttcagccaaaccaaaaaatcggattccataaaaccaatcagaaaaaggagatgtggcatttgaatttgt  4510600                    --------->ATHB12                    <---------AHL20(2)           --------->ANAC58  --------->ANAC58                                   ------->TEIL           --------->ANAC58  --------->ANAC58    --------->YAB1              <---------YAB1           --------->ANAC46 --------->DAG2      <---------ATHB12        ------>ZmHOX2a(1)         <-----------GT1   ---------->DOF2   <---------AHL20(2)     <-----------GT1             ----- -----RAV1(1)      <---------YAB1           --------->AHL20(2) <---------AHL20(2)           <--------   tgcaaatgttttcactcaatatttattgaaaaagcaaaactccatattaaatcatactctaacatttttttttcctactatgaatgctactacaaatatg  4510700                                    <---------DAG2                       <---------HSFC1(1)                       --------->HSFB2a(2)                          --------->ZAT14       ----------->GT1 <---------HSFB2a(2)            <---------ANAC46        ------->TEIL         <- ------>GT1            --------->HSFC1(1)             <---------ANAC58     <---------ATHB12       <-- -ARR14(2)<---------AHL20(2)        <----------DOF2   <---------ANAC58--------->YAB1          -------   gtggaaaactagttatttgttttctctagaaacttacactttattcgtctaaatttgcttgcaatagaactatactaatgaacattcaaatcacaaatga  4510800                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                       --------->DAG2                                       -------->ATHB1                                 ---------->DOF2                        --------->TOE2(3)                                        --------->ANAC58                      --------->ARR11(3)   --------->AHL20(2)                    <-----------------AGL1                      --------->GLK1(2)<--------HAHB4                            ----------------->AGL1                      <---------ARR11(3)   <---------AHL20(2)                    --------->ANAC58                     --------->CCA1(1) <---------AHL20(2)                       --------->PCF2                     --------->RVE1(1) --------->ATHB51                        <---------PCF2               ------>ZmHOX2a(1)       --------->AHL20(2)                      --------->TCP20             --------->YAB1           <---------ATHB12                         --------->TCP15(1)            <<<<<<<<<ARR2             --------->ICU4                          <---------TCP23            <<<<<<<<<ARR1     --------->ARR11(3)                              ----------->HVH21    <-----------GT1--------->AHL20(2) <---------ATHB51                        <---------TCP15(2) ---------DOF2--------->TOE2(3)    <---------AHL20(2)                        --------->ABI4(2) -------DAG2<<<<<<<<<ARR1   <---------TOE2(3)               ---------->DOF2  <---------MYB46(3) ---->HVH21 <<<<<<<<<ARR2   <---------TOE1(3)          --------->YAB1       --------->ALFIN1   ccttttttactacaatcctaaaaaaatcttaaggtattcaattatttaaatgaacaataagaaaaagacacaaacacggtgggacccaaaaaggtctctc  4510900          --------->ANAC46          --------->O2     <---------TCP15(1)     --------->PCF2    <---------PCF2   <------MYB83--------->ARR14(2)   <------MYB46(1)                            <---------ZAT2  --------->MYB59                             --------->ZAT2  --------->MYB46(2)--------->ANAC46          <---------At4g35610  --------->MYB111(2)                 ----------->TBP  --------->MYB111(1)   <------------CBF      --------->At4g35610       *TSS <--------P    <---------ARR14(2)   <----------DOF2---------->DOF2<-----------GT1   aaggtaggtcccacgagaataccctccattgctgagtgctttaaaaacagctgcaaagcatctacgttttagcatccgaacaaaaaaaaaaacaagtttt  4511000                                                 --------->ANAC58                                                 --------->ANAC58                                         <----------DOF2                                        ------>ZmHOX2a(2)                                       <---------RVE1(1)                                       <------ZmHOX2a(2)                                      <-----------ARR10                                      <---------ARR14(2)                                      --------->ARR11(3)                   <---------AHL20(2) <---------ARR11(3)                                           <-         --------->ANAC58             --------->ARR14(2)                                           --         --------->ANAC46             <---------ARR14(3)                                           --         --------->ANAC58             --------->ARR14(3)                                          ---       --------->ZAT6                 <---------AGP1           <----------DOF2                   ----     <-----------GT1                  --------->AGP1      ---------->DOF2 ---------->DOF2        ---- <----------DOF2   --------->AHL20(2)<---------CCA1(2)   <---------AHL20(2)        ------->TEIL  ----   cttctttttacactcaagaatataaattccctgttctccagatcttttctcaagaaaatttaaagctttaacttaagaaagcttgaacctttctcttcca  4511100  <---------ARR11(3)                                                      ------>MYB83 <---------AHL20(2) --------ALFIN1                                                           ------>MYB46(1) ------->AtMYB61                                                          -------->P   --------->AHL20(2) ----->GAMYB                                              <---------ARR14(2)          --------->AHL20(2) ------>MYB46(3)     ------>ZmHOX2a(1)                    --------->ARR14(2)          <---------AHL20(2) ---->P          <-----------GT1                     ----------->GT1   --------->MYB46(3) -->MYB46(1)    <-----------GT1                  --------->DAG2     --------->ZAT18<---------AHL20(2) -->MYB83   <----------DOF2<---------------AGL15---------->DOF2---------->DOF2  ----------->GT1   accacatcttccttctttttatcctctagctcaacttagaaagaatagaataaagtggcaaaaccgaaagtgaaccaacttgtagtaaattaatagttat  4511200                                                 <---------At4g35610                                       <---------RAP2.3(1)                                       <---------ERF1                                       ------>NtERF2                                      <---------RAP2.6(2)                                      <---------ANAC46                                      <---------DEAR3(1)                                      <---------RAP2.3(2)                                      --------->ATERF1(2)                                      <---------ATERF1(2)                                      <---------RAP2.3(3)                               <------NtERF2 --------->ARR14(2)                              <---------MYB46(3) --------->ZAT14                             <---------ANAC46<---------ARR14(2)                 --------->AtLEC2    --------->RAP2.6(3)          ------>MYB83       <---------RAP2.6(2) <---------ZAT14      <---------ANAC58          ------>MYB46(1) --------->ALFIN1  <---------ARR14(2)        <---------ANAC58        <---------MYB59--------->GLK1(2)<------NtERF2                 <---------ANAC46   gggttcgaaacctaatgccatgaagaatgtggtggctatggcggcagtttctgctctgttccttctagggtttcttgtttgctctgtttctggttctgtc  4511300                                                       ------>ZmHOX2a(2)                                                       ================================HOX2a_HOX2a                                                     <---------ARR11(3)                                                     --------->ARR14(2)                                                     <---------AGP1                      <---------YAB1   --------->GLK1(2)            <-----------RAV1(2)                    <---------------AGL15            <---------ARR14(2)                    --------------->AGL15   <---------CCA1(2)      <---------LBD16                <--                   <-----------------AGL2  ------>ZmHOX2a(1)      ----------->RAV1(1)             <--                   ----------------->AGL2  ===================HOX2a_HOX2a                    <-------                   <-----------------AG<---------ARR14(2)         ========================RAV<-------                   ----------------->AGL1 --------->TOE2(3)      --------->ANAC46      --------->MYB52(2)       --------->At4g35610             --------->ARR14(2)      <---------ALFIN1   <---------TOE2(3)       <---------At4g35610     ---------->DOF2   <---------LBD16-------->P      ------>ZmHOX2a(1)<---  <---------YAB1   <-----------------AGL1 --------->TOE1(3) <-----------GT1   ----------->RAV1(2)<---   tcttacgatagcagagccattaccatcaatggcaaaagaagaatccttatctctggatctattcactaccccagaagtactcctgaggtttgtttgcttg  4511400                                                                                        <---------ANAC58   --------->MYB52(2)                                                                   <---------ANAC58 -------DAG2                                                                         <---------MYB52(1) --------DOF2                                                           --------->ARR11(3) --ANAC58                             ------->TEIL                      <---------ARR11(3)     <----- --ANAC58                            <---------CCA1(2)                  --------->GLK1(2) <---------CCA1(2) ------ANAC58          <---------AHL20(2)   <---------ANAC58        --------->YAB1 <---------ANAC58 ------ANAC58         --------->AHL20(2)    <---------ANAC58----------->GT1        <---------ANAC58   ctttttagttgcaatgtagttagatttatttcaaagtttgaatctttcgttccccattgtttgagtaaaatcaaaatctagggtttcgtttcttatctct  4511500  Previous    Next  AGI:  At3g13750.1    Description:  BGAL1 (BETA GALACTOSIDASE 1); beta-galactosidase. Identical to Beta-galactosidase 1 precursor (BGAL1) [Arabidopsis Thaliana] (GB:Q9SCW1;GB:Q56W18;GB:Q8RWC1); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.2); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96254.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45692.1); similar to beta-galactosidase [Fr Range:  from: 4510972    to: 4516305    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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