Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ANAC58                                                                  --------->ANAC58                                                                  --------->ANAC46                   <------ZmHOX2a(2)                   --------->ANAC55(2)                  --------->AGP1                  --------->ATHB12--------->ANAC55(1)          <---------At4g35610           <------ZmHOX2a(2)         --------->ANAC55(2)        <-------          <-------GAMYB--------->At4g35610       <---------YAB1   <---------ANAC55(2)   <---------YAB1          --------->At4g35610      <---------DOF5.7(2) <---------ANAC58            <------MYB83        --------->ETT(1)           --------->MYB52(1)  <---------ANAC46        --------->ATHB12------        <---------ANAC46         --------->ARR11(3)    <---------ANAC58   --------->ANAC58   <-------      <-----------HVH21<---------At4g35610     --------->MYB52(1)<---------LBD16   <------MYB46(1) -------CDC5     --------->At4g35610  ------->GAMYB    <---------ANAC55(2)--------->ANAC58<---------GLK1(2)   atgagcgatgtcggatgccagatcaagctgaagaagataacgatcaagacaacgattgcgtagttcatacggaagtaagcaagattggtcttgattcttg  4495600                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                    ------->MYC3                                                                    <-------MYC2                                                                    <-------PIF5                                                                    ------->MYC2                                                                    <-------MYC3                                                                    ------->PIF5                                                                   ==========================bZIP_DOF                                                                   --------->ALFIN1                                                                   <---------ANAC46                                                                   <---------TGA1a                                                                   <------NtERF2                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                  ------>NtERF2                                                                 <---------ANAC46                                                              --------->ANAC58                                                              --------->ANAC58    ------->TEIL                                              --------->ANAC46 --------->ANAC58                      <---------GLK1(1)      <---------DEAR3(1)                   <- --------->ANAC46                      --------->GLK1(1)   <---------ZAT2              --------->ARR14(1) --------->ANAC58--------->ALFIN1<---------ANAC58          --------->ZAT2           ----------->ARR10 --ANAC58        <---------MYB52(1)--------->ALFIN1       --------->ANAC58        <----------DOF2  <- --------------->WRI1            <---------ANAC46         --------->ANAC58     --------->LBD16     <- --ANAC58       <-----------HVH21<---------ANAC58         --------->ANAC46   <---------LBD16 <-------   tgaacgcatcggagacaccgtgaggcagtcccatggagtggaaatcgaacatcactctccaagcacggcgcgtggctagcccggctttgatacggtgttt  4495700                                                                                                    -                                  <-------TEIL                                                     --                               --------->GLK1(1)     ----------------------->TaNAC69(2)            <-                               --------->At4g35610 --------->ARR14(2)                              <-                            ------->GAMYB          <---------GLK1(2)                               --                            ===========================MYC_MYB                                    <--   ----------->HVH21      ------>MYB46(1)          <---------ARR14(2)                             <--  <-----------HVH21       ------>MYB83       --------->bZIP60(1)                                  <-- <---------ANAC58        --------->MYB52(1)  <---------O2                                       <---- <---------ANAC58       --------->DEAR3(1)   <---------bZIP60(1)                                <---- --------ANAC58         --------->AtMYB61    <---------TGA1a                                    <---- --------ANAC46         --------->MYB46(3)   --------->TGA1a                            <---------TOE2(3) --------ANAC58        --------->MYB46(3)    --------->O2                --------->YAB1 <---------TOE1(3) --MYB46(3)         --------->MYB46(3)    ----------->HVH21            --------->ICU4   <---------YAB1   agcgcgtgagagagactcgacatccaccaacggagatgcatgagacgacgtcggaatcgcaccgtagttcgtcattagtaatatcgggttatggtttagc  4495800 -------->ALFIN1 ----->MYC2 ------MYC2 ------MYC3 ----->MYC3 -------ANAC58                                                                 <------MYB83 -------ANAC58                                                                 <------MYB46(1) -------ANAC46              ---------->DOF2<---------ANAC46 <---------HSFB2a(2)<---------ANAC55(2) -----ANAC58         --------->AHL20(2)    <---------ANAC55(1)---------->DOF2  --------->ANAC55(2) -----ANAC58       ----------->GT1    <---------MYB46(3)    <---------YAB1    --------->MYB59    ---- -----ANAC46     ---------->DOF2    <---------MYB52(1)  <---------GLK1(1)     --------->MYB46(2) <---   gcgtgtgagattgaatagagaaagtaaatgaaaagactgtttgttatgtgtatatatgaattctgaaaggtcccaagaattaggtgatacacatttgcat  4495900                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                   <---------TGA1a                                                                                   --------->TGA1a                                                                                   ==================                                                                                   <---------ANAC55(1)                                                                                   <---------O2                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                    ------>ZmHOX2a(2)              <---------ANAC46                                           --------->AHL20(2)                      --------->ANAC55(2)                                           <---------AHL20(2)                      <---------ANAC55(2) <---------ANAC58                         <---------AHL20(2)                       --------->O2 <---------ANAC58                         <---------AHL20(1)                  <---------ZAT6 <---------ANAC46                         --------->AHL20(1)           --------------->AGL15 --->MYC3                                 --------->AHL20(2)   *TSS    <---------------AGL15      <-- ----MYC3                       --------->AHL20(2)--------->ARR11(3) ------------>CBF    <------ZmHOX2a(1)   atggcgttttctaaactaatctatgtttatgaaataaaacaaaatttaattagatcgtgttttaaaaagattacaatatagtgtaacgtgaggatttgat  4496000                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                            <-----------TBP         <---------WRKY12                    --------->CCA1(2)         <---------WRKY38(1)                <---------ARR14(2)        --------->WRKY18(1)        <---------GLK1(2)--------->MYB52(1)          <---------------AGL15        ------------>CBF           --------->ARR14(2)   ------------>CBF        --------------->AGL15 =============================bZIP_DOF      --------->ARR14(2)               <-----------GT1        - ---------GT1      ---------->DOF2 <---------ARR14(2)  ------->GAMYB  --------->At4g35610   <------ZmHOX2a(1)   tcactacttggtcaatgtctgaaaagtataagttttagatactcgagatttgggtaacagcaatttataagtagatgaattactacatgttgaaggacta  4496100                                                                                        ----------->HVH21                                                                                       <-------MYC3                                                                                       <-----------HVH21                                                                                       ------->MYC2                                                                                       ------->MYC3                                                                                       <-------MYC2                                                                                      <---------ANAC55(2)                                                                                      --------->bZIP60(2)                                                                                      --------->ANAC55(2)                                                                                      --------->ANAC46                                                                                      --------->O2                                                                                      <---------O2                                                                                      <---------TGA1a                                                                                      --------->TGA1a                                                                                      --------->ANAC55(1)                                                                                      --------->ANAC58                                --------->CCA1(2)            -------->ATHB1           --------->ANAC58                        --------->DAG2                       --------->ATHB12       --------->REM1(1)                    -------->HAHB4                           --------->ATHB51       <---------ALFIN1                    --------->YAB1                          --------->ICU4         <---------REM1(2)                   <---------ATHB12                         <---------YAB1     --------->ANAC58                   <---------YAB1                    --------->ALFIN1          --------->ANAC46                   --------->ICU4            --------->DEAR3(1)          ----------------------->TaNAC69(2)   <---------AHL20(2)  ---------->DOF2   ----------->HVH21 <----------DOF2     --------->ANAC58 ---------->GT1   <---------TOE2(3)     <-----------HVH21  =====================================bZIP_DOF   tatagttaatttgaaagactaatgataaagtaagagacacggtgtcaccgagcgagagtggcattattgaatagtcgatacaggctacacgtgaccccat  4496200                                               <---------At1g77200                                               --------->ETT(2)                                               --------->ETT(1)                                               <---------RAP2.6(2)                                               <<<<<<<<<<AtTINY2                                              --------->RAP2.6(3)                                              --------->DDF1                                      ------->MYC2                                      ------->MYC4                                      <-------MYC3                                      <-------MYC4                                      ------->PIF5                                      <-------PIF5                                      ------->MYC3                                      <-------MYC2                                     <--------ABF1                                                <--                                     <---------TGA1a                                            <----                                     --------->O2                   <---------AHL20(2)          -----                                     --------->TGA1a                --------->AHL20(2)        -------                                     <---------ANAC46              --------->AHL20(2)         <------                                     <---------ANAC55(2)     ----------->GT1                 <-------                                     <---------O2          --------->ICU4           --------->TOE2(1)                                   <---------ALFIN1  <------ZmHOX2a(1)              --------->TOE1(1)                <---------ANAC46--------->ANAC46<---------DEAR3(2) <---------AHL20(1)    <---------DAG2    <------ZmHOX2a(1)<-----------GT1------>NtERF2<------NtERF2     <---------AHL20(2)    <----------DOF2   tttagaggagtctctctggcatataactactctttcgccacgtgtaatgtcggcaggaacaatgagtaaattatttatagtctccctcggactttatcat  4496300                                                          ------->MYC3                         --------->CCA1(2)                <-------MYC3                        --------->ARR11(3)           <-----------HVH21 -------ARR11(3)        <---------ARR11(3)   --------->HSFB2a(1)                  <---------ALFIN1 -----YAB1              --------->AHL20(1)   <---------HSFB2a(1)                <------ZmHOX2a(2) ---->ICU4          ---------->DOF2         <---------TOE1(2)                  <---------ARR14(2) -->YAB1        --------->YAB1              <---------TOE2(3)                  --------->ARR14(2) ---ICU4 --------->At4g35610                <---------TOE2(2)         --------->ATHB12 --YAB1  <---------At4g35610             <---------MYB52(2)         >>>>>>>>>>>>>>>>>LFY          <--   gatttttagtcagcccaattacaaaagatattggcccaatacaacgaaggtttcatgtcacatgctctctctccattggacgatccacatcgataggctt  4496400                                                                <---------ANAC58     --------->ANAC58                                           <---------ANAC58     --------->ANAC58                              ----------->GT1                          <------ZmHOX2a(2)   <---------ANAC58                ------>ZmHOX2a(2) --------->AHL20(2)                    XXXXXXXXXX   <---------ANAC58    <----------DOF2             --------->ANAC58     ---------->DOF2    --------->ARR11(3) --------DOF2      <---------RAP2.6(2)             --------->ANAC58  <-----------HVH21     <---------ARR11(3)   ctttagcgagccagactcatggctgctttagaattgatcccgctctgtgaaacaagaaaatagttagcttgtgtcaaagcacaatacatataagatcaaa  4496500  Previous    Next  AGI:  At3g13720.1    Description:  prenylated rab acceptor (PRA1) family protein. similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT3G13710.1); similar to prenylated rab acceptor family protein [Thlaspi caerulescens] (GB:AAY18432.1); contains InterPro domain Prenylated rab acceptor PRA1 (InterPro:IPR004895) Range:  from: 4495026    to: 4495963    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version