Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ANAC58               ==========================HOX2a_HOX2a   --------->ANAC46          <---------WOX13(1)   --------->ANAC58        --------->ATHB12 --->At4g35610          --------->YAB1                             --------->ANAC58 -->RAP2.6(2)        ----------->RAV1(1)          <---------LBD16  <<<<<<<<<<<<<<<<<LFY -ZAT2              --------->MYB46(3)    <---------ZAT18          --------->ANAC58 >At4g35610        ------>MYB46(1)===================================HOX2a_HOX2a >ZAT2             ------>MYB83   ------>ZmHOX2a(2)  <------ZmHOX2a(1)                         ------ -At4g35610       ----------->RAV1(1)     --------->ZAT14     <------ZmHOX2a(1)            <---------TOE2(3)   caaaccagcaagtccagcaccaacaacaatgactgatccctcagtaccctcttcaggaatataaggagcaaacaatggagaaaccccaaaattgatgtat  4481100                             --------->GLK1(1)                        <---------At4g35610                        <---------ZAT2                                    <----------DOF2                        --------->ZAT2                                   ------>ZmHOX2a(2)                        --------->At4g35610                            <---------ARR11(3)        <--- --------->AHL20(2) --------->ANAC46                 --------->MYB52(1)--------->ARR11(3)     <------ ->TEIL         --------->YAB1           ---------->DOF2  <---------GLK1(2)                 ---------   ccattaaacaagagaaaatcataagcagctgaaatcaaatgctcaaagtcactactaacagtttctctaatctgatctttgagtagccaaattccaacat  4481200                                                                                                  ---                                                                                      <-----------ARR10           <---------STY1(2)                                                          <---------ARR11(1)          ------>MYB83                                                                ------->TEIL---          ------>MYB46(1)                                                            <---------CCA1(2)       --------->ANAC46                                   --------->LBD16            <---------GLK1(2)     <---------ALFIN1                                     ------>NtERF2         --------->At4g35610  --------->ANAC46                                       --------->ANAC46       --------->ZAT2    --- --------GT1        <---------YAB1                      <---------LBD16         <---------ZAT2 ------ ---ICU4<---------MYB111(2)--------->LBD16          <----------DOF2             <---------At4g35610 -->RAV1(1)--------->STY1(2)                    <---------At4g35610     --------->REM1(1)     -------   tacccctccacctagctactatatgattccgaacaacaatgtaatcgttctgctctttcccgcctaattctcttacaactccagctcgaatctcttcctc  4481300                                                                                ------>ZmHOX2a(1)                                                                               --------------->AtSPL8                                                                        <---------ANAC58                      ------>MYB46(1)                             <---------ARR11(3)                      ------>MYB83                                --------->ARR14(2)         --------->ATHB12           --------->YAB1                <-----------ARR10 ------>ANAC58        <---------LBD16                             <---------ARR14(2) ------>ANAC58       --------->MYB52(1)                           <---------ARR11(1) <---------DAG2 ------>ANAC46      --------->TOE1(2)                             --------->ARR11(3) <----------DOF2 >ZmHOX2a(1)        --------->TOE2(2)                            <---------CCA1(2) ------->TEIL  <--- -->TOE2(3)      --------->GLK1(1)<-----------HVH21      <----------DOF2<---------ANAC58        <----   aagcaattcgtcgattgggaaacctacggacagagctatcagagcctcggtctcagtctctttctccaaatcttgcttcgtcctgtactttttcttcgcc  4481400                                                                                                    <                                                                                                    -                                                                                               ------                                                                                               ------                                                                                     <------NtERF2  <                                                                                    ------>NtERF2  --           <---------ANAC58                                                        <---------ARR14(2)        <---------WOX13(1)                                                      --------->TOE1(1) <--      ------>MYB83                                                             <---------HSFB2a(2)---      ------>MYB46(1)                                                 ------>ZmHOX2a(1)        ------    <---------MYB59                                           <----------DOF2  ------>ZmHOX2a(1)<----    <---------MYB46(2)                                        <---------DAG2   <---------LBD16-------    <---------MYB111(1)                                    <-----------GT1     --------->HSFB2a(2)---   --------->ANAC46<---------ATHB12             --------->ARR11(3)  ----------->RAV1(2) <---------MYB52(1) -------DOF2     --------->WOX13(1)    <---------YAB1  ------>ZmHOX2a(1)    ------>ZmHOX2a(1)<------- -----DAG2 <---------ANAC58 --------->MYB46(3)  <---------ARR11(3)<-----------GT1  --------->ARR14(2)   tttccacctaattgcttctcaatcaattcatccatcgcattctcatcgtagttcttcctacttacttttctcctgttcctcctcggagccgtttcatccg  4481500   <------NtERF2  --------->LBD16 <---------ANAC46 --------->DEAR3(1) ------NtERF2 -------->ATERF1(1)                                                                                 - --->ANAC46                                                                                         < ->GAMYB                                                                                            - ---------LBD16                                                                                     = ---->NtERF2                                                                                        - -------DEAR3(1)                                                                                  <-- ------>DEAR3(1)                            <---------At4g35610                               <------ ----->HVH21                                --------->At4g35610                            <---------ANAC58 -----ATERF1(1)                   ------>MYB46(1)                                          <---------ANAC58 -->MYB46(3)                      ------>MYB83                                          <---------MYB52(1) ------>ANAC46       --------->WOX13(1) --------->AtMYB61                              <---------DEAR3(2) --At4g35610       ------------>CBF     --------->DEAR3(1)                           ---------->ID1 <   acgccggagaattcatttctggtcaattaagtcaccaaatcacctccgcttcgttttacttagaaactaatcgaccctaatctcttcgtcgtttcgtttc  4481600          ------------>CBF         <-----------GT1                                                                          --- -------->TGA1a                                                                        --------->ATHB12 ---------TGA1a                                                                     <------------CBF ---------->RAV1(2)                                                             <------NtERF2     <-- ===================================MYC_MYB                                    ------>NtERF2     ---- -------->ZAT2             ------->TEIL                                      <------NtERF2------>ZmHOX2a(2) -------ALFIN1             -------->P                     --------->YAB1     --------->ATERF1(1) <--- -----HVH21         ------------>CBF        <---------ALFIN1                <---------ATERF1(1) <---- ---------ZAT2 --------->YAB1--------->TOE2(3) --------->TOE1(2)           <---------DEAR3(1)   -----   acacctgagtttcacaatcgtgtccaatctacctcaagttacttcaacaccttcgaagattaataaccaaaaaatcgtcgtcgccaaattgatcggagaa  4481700           <---------MYB52(1)         <---------ANAC58         <---------ANAC46         <---------ANAC58                                        <---------ANAC46        <-------TEIL                                             <---------ANAC58      --------->ARR14(2)            --------->ARR14(2)      <---------ANAC58      <---------GLK1(2)          <---------TOE2(3)          <---------AtLEC2      <---------ARR14(2)       ------------>AtMYB77         <---------ANAC46    --------->LBD16         <---------ARR14(2)              <---------ANAC58   <---------HSFB2a(2)      --------->AGP1               <---------DEAR3(1)   --------->HSFB2a(2)      --------->ARR14(2)   ------->TEIL    <---------ANAC58  <---------LBD16         --------->LBD16        <---------ARR11(1) ------>HSFB2a(1)        --------->HSFB2a(2)     --------->ARR14(2) -------HSFB2a(1)        <---------HSFB2a(2)     <-----------ARR10 ----->ARR11(3)         <---------LBD16<---------YAB1 <---------ANAC58 ------ARR11(3)     <---------DAG2  <---------ARR14(2)<---------ANAC58           <---------TOE2(3) -----GLK1(1)       <----------DOF2<-------GAMYB --------->GLK1(2)             ---------->DOF2 ---->GLK1(1) ----------->GT1<------ZmHOX2a(2)   <---------ARR14(2)       --------->AHL20(2) <-------   atcttccggattcgtgaggttacttttcccgatctacggttacgattttcgaatctgcgtctgcgtggtttgcagaaaaaataaaggtttatgggcctaa  4481800                                                                                                   <-                                                                                            <--------                                                                                            <--------             ---------->DOF2                                                                <--------        <---------AHL20(1)                                                                  <--------        --------->AHL20(1)                                                                  ---------        --------->ARR11(3)                                                                 <-------TEIL        <---------ARR11(3)                --------->AHL20(2)                              <----------        <---------AHL20(2)                <---------AHL20(2)                           ----------->GT1       --------->AHL20(2)                --------->AHL20(2)                          --------->ARR11(3)   <---------AHL20(2)                    <---------AHL20(2)                          <---------ARR11(3)   --------->AHL20(2)            ----------->GT1                             --------->ALFIN1 ------- --MYB59--------->AHL20(2)      --------->DAG2                       --------->YAB1 ------------>MYB.PH3(2)   atgaataaaatatattaaagcccattgggcctgtaaggtgatattaatttagtctattacacaattgtggatgataagagtggagaagatagttacatgt  4481900                                                                                <---------ZAT14                                                                                --------->ZAT14                                                                               <---------REM1(1)                                                                               <---------ZAT6                                                                         <---------AHL20(2) --------YAB1                                         --------->ARR11(3)<---------AHL20(1) -ANAC55(2)                                        <---------TOE2(3)    --------->AHL20(1) -ANAC55(1)                                       ---------->DOF2       --------->AHL20(2) -ANAC58                                      ----------->GT1     --------->ANAC58 -ANAC58                                      <---------ZAT6      --------->ANAC46 >ANAC55(2)        ------>NtERF2         ----------->GT1          --------->ANAC58 -GT1             --------->RAP2.6(2)    --------->YAB1 ---------->DOF2 <---------AHL20(2) -->ANAC46   ---------->DOF2     --------->ICU4--------->TOE2(3)  --------->AtLEC2   cattgttgacataaccaaagcggcccatacatgaaatgatgtatggtaatgttaaagataaagagaacatgcaatttaatagtgtagggtcattgtctct  4482000  Previous    Next  AGI:  At3g13682.1    Description:  LDL2 (LSD1-LIKE2); amine oxidase. similar to LDL1 (LSD1-LIKE1), amine oxidase [Arabidopsis thaliana] (TAIR:AT1G62830.1); similar to FLD (FLOWERING LOCUS D), amine oxidase [Arabidopsis thaliana] (TAIR:AT3G10390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39215.1); similar to hypothetical protein OsJ_024973 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41490.1); similar to hypothetical protein OsI_026796 [Oryza sativa (indica cultivar-group)] (GB:EAZ05564.1); contains InterPro domain SWIRM (InterPro:IPR007526); contains InterPro domain Amine oxidase; (InterPro:IPR002937) Range:  from: 4479200    to: 4481516    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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