Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ANAC58                                                                                   <---------ANAC58                                                                                  <---------HSFC1(2)                                             ------->GAMYB                        --------->At4g35610                                             --------->TOE2(3)               --------->DAG2       ---                                       <-----------GT1                   --------->YAB1           <-- -->TEIL       ---------->DOF2   ------>ZmHOX2a(2)         ---------->DOF2  ---------->DOF2--------->ZAT6 --YAB1    --------->YAB1  <----------DOF2   --------->TOE1(3) ----------->GT1    --------->HSFC1(2)   ttttgaaatcaaatcagaaaagtttcaggctttgatccaaattacaaccctaattcttgaagaaagtgtaacaaatcagaaagtagcttccttccactaa  4452200                                                 --------->DAG2                                                ---------->DOF2                                        <---------REM1(2)   <----------DOF2                                   <---------ANAC46        ------>ZmHOX2a(2)                       --                                <---------bZIP60(1)       <------ZmHOX2a(2)                     <----                                --------->bZIP60(1)      --------->ARR11(3)                     ----- ------>ARR11(3) <---------AtMYB61 <---------ANAC58      <---------ARR11(3)                 <-------- -------ARR11(3) --------->ALFIN1  <---------ANAC58  <-----------GT1              ----------->GT1  --   aatctctaatagataagcagtggtgttcttagtgatgtcgtctacacatataaagttacgatctttgtgtgatttggatttgaattgagaaatacctgga  4452300          <---------ZAT14     <---------ZAT14                                                                  --------->PCF5     --------->ZAT14                                                      ----------->GT1 <---------ZAT2    --------->ALFIN1                                          <------ZmHOX2a(1)       --------->WRKY18(1) ------->ANAC58     --------->ATHB12<---------ARR14(2)      <---------TOE2(3)        <-----------HVH21 -----ARR14(2)     --------->ICU4   --------->ARR14(2)    --------->CCA1(2)     --------->DAG2      - ---->ARR14(2) <---------ZAT14   --------->LBD16         --------->ARR11(3)    ---------->DOF2      - -LBD16   --------->ZAT18    <----------DOF2    ---------->DOF2        <---------GLK1(2)<-----------RAV1(2) ------->ANAC58--------->ZAT14 <-----------RAV1(2)     ----------->ARR10--------->GLK1(2) <---------At4g35610   aacgcagtggagagctctgcagtgattagggcttcagggatactccaaatgaaagggaagataaggaaaccgagaatcgctaaaagcggtccagccgctt  4452400                 ------>MYB46(1)                 --------->MYB52(1)                                                     <----------DOF2       <-----------ARR10                                                               <---------ANAC58       <---------ARR14(2)                                                              <---------ANAC58       --------->ARR14(2)                                                           <--------P      <---------MYB52(1)               ----------->GT1                              <---------MYB52(1)     <---------DEAR3(2)              ---------->DOF2                               <-------GAMYB    <---------DEAR3(1)            --------->TOE2(3)      --------->MYB52(1)       <---------MYB46(3)  --------->MYB52(1)           <---------ZAT18          ---------->DOF2          <---------RAP2.6(2) ------->GAMYB   ------>MYB83 --------->DEAR3(1)     >>>>>>>>>MYB2               <---------ANAC58 --------->DEAR3(1)         --------->ANAC46     <------ZmHOX2a(1)               <---------ANAC58 -------->MYB46(3)      --------->AtMYB61      <---------TOE2(3)             <----------DOF2 -------->DEAR3(2)     --------->MYB46(3)--------->AHL20(2)      ---------->DOF2<---------LBD16  ----   gaaccgccggttcttcaccaaatggaccaccagcgacctcaaagtaaataaggaaaaccaaagggattaaagtcagtttctttgcggttgctttcttccc  4452500                 <---------ANAC46          <-------GAMYB         <---------MYB46(3)         --------->MYB55(2)       <---------At4g35610 <-------PIF5     <---------RAP2.6(2)   ------->PIF5  <---------GLK1(2)    <---------At4g35610                                          --------->TOE1(2)  <---------ARR14(2)   <---------ZAT2                <---------WOX13(1)             --------->TOE2(2)  --------->ARR14(2)   --------->ZAT2         <---------At4g35610                  ----------->RAV1(2) ----->LBD16<---------MYB46(3)             ------>NtERF2   --------->ICU4        <-----------GT1   gctggattcggctgttgttactgggagctcgtggctcgatttcgatgcctctgagattgccatttttgtgttttgttttgtttttacctgagatagtgga  4452600                                                                   <------MYB46(1)                                                                   <------MYB83                                                                   <---------MYB46(3)                                                                  --------->MYB111(2)                    <------ZmHOX2a(1)               --------->ALFIN1                           <xxxxx                  <---------TOE2(3)                ------->MYC3   <---------AtMYB61 <---------ARR11(3)                ---------->DOF2                    <-------MYC3   --------->MYB55(2)<-----------ARR10               <---------AHL20(2)        <------------CBF         --------->MYB59  <---------GLK1(2)            ------->TEIL       <---------TOE2(3)  <---------ANAC46--------->MYB111(1)      <---------         ----------->GT1       <---------TOE1(3)  <---------O2    <---------MYB46(3)--------->GLK1(2)     <---------TOE2(3)         *TSS     --------->ATHB12         <--------P--------->YAB1 <----------   agagattgagaatgtatataaaggatgatgttgaaggttgtttcattgagaaacgtggaagtaatgggttggtcgtatcagaacagaatctttctttttt  4452700                                                           --------->CCA1(2)                                                          --------->ARR11(1)                                                          <---------ARR14(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                          --------->ARR14(2)                                                        ----------->ARR10                            <------MYB46(1)           <---------At4g35610                          <-                            <------MYB83            <---------HSFB2a(2)                            --                  <---------ZAT14              <---------ICU4                                  ------             <---------ANAC58                <-----------ARR10                                 <-----             <---------ANAC46                <---------ARR11(3)                      <---------MYB46(3) xxxxxxxxxxxxxxxsmallRNA(le3)                --------->GLK1(2)                    <-----------RAV1(1) -DOF2       <---------ANAC58               <---------GLK1(2)                    xxxxxxxxxxxxxxxxxxxx --------------ANAC81 <---------YAB1--------->YAB1  --------->HSFB2a(2)       xxxxxxxxxxxxxxxxxxxxxxx   tttttttttttttttgtgtgtgttctgatttggttttatcagaacagaatctttgcagaagatttggagccattagatttcaatgtgttgttgatggtat  4452800          <---------AHL20(2)          --------->ATHB12         <---------AHL20(2)         --------->AHL20(2)      --------->AHL20(2)                                                            <---------YAB1     <---------YAB1                                                              <---------YAB1  <---------YAB1                                                                 --------->ICU4 ---------DOF2                                                              <---------ANAC58 ---->ZmHOX2a(1)                                                   <----------DOF2--------->YAB1 --->ARR14(2)                                          --------->AHL20(2)   <---------ANAC46 ----ARR14(2)                                   <-----------GT1   <-----------------AGL3 xxx>smallRNA(i2)          <---------YAB1<------MYB83  <---------AHL20(2)   <---------ANAC58      --- >smallRNA(i2)           --------->YAB1  <------MYB46(1)          <-----------------AGL2--------->AHL20(2)   ccttttgattatttattagtcaatgtattatgattttagtatttggtttttttctatataaatttctgtctttttatggagtgatgataattcaatactc  4452900                                            ----------->GT1                                            <----------ID1                              --------->WRKY18(1)       ---------->DOF2           --------->ARR11(3)                             ------------------------>ANAC81             --------->ICU4                             <-----------HVH21    ---------->DOF2     ---------->DOF2<----------DOF2                     <---------AHL20(2)    ------------------------>ANAC81<------ZmHOX2a(1) --->ZmHOX2a(1)     --------->AHL20(2)    ---------->DOF2         ---------->DOF2 <---------ARR11(3)   cttacctatggacagtaagagattaaatagaggtcaaacaaacaaaaagaaaaaaagagaaagaaactaaaagaaaggattagagttctttagcctactt  4453000                       <---------YAB1                     --------->TOE2(3)                     --------->YAB1                   --------->ARR11(3)                                                             <--                   --------->AHL20(1)                                                             ---                   <---------ARR11(3)                                                           -----                  --------->RVE1(1)                                                             <----                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->AHL20(2)              <---------ARR11(3)                  --------->CCA1(1)                 <-----------GT1                       <---------AHL20(1)              --------->AHL20(2)              <---------DAG2                              --------->ARR11(3)              <---------AHL20(2)              <----------DOF2                             --------->AHL20(1)            <----------DOF2                <---------ALFIN1  ---------->DOF2<-----------GT1  <-------   ggacttggattagtctttaaatatcttaattgtgcaaaacatgttccactttataaacattttaaaagaaacccaaaatttctatacagaaatattttct  4453100  Previous    Next  AGI:  At3g13620.1    Description:  amino acid permease family protein. similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT3G19553.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22051.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) Range:  from: 4450752    to: 4452631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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