Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->AHL20(2)                                                       <---------AHL20(2)       --------->LBD16                             <---------AHL20(2)      <---------ANAC58                          --------->YAB1      <---------ANAC55(1)                      <---------YAB1      <---------ANAC58                         --------->ICU4      --------->ANAC55(2)                    --------->YAB1      <---------ANAC46                   <-------TEIL --------->AHL20(2)     <---------LBD16               --------->YAB1  --------->AHL20(1)             <----------DOF2 -----AHL20(2)                    <---------ATHB12 <---------AHL20(1)         <---------ATHB12 --->AHL20(2)                   --------->WOX13(1) --------->AHL20(2)       --------->WOX13(1)   tatgttttccgtatgtgtgtttcgacaacttctccaatcaaaatgcataataataaattaatcgatttagttttattccaatcactttgttactaacaaa  4432700                                                                                            ---------                                                                                        --------->AHL20(1)                                                ---------->DOF2 ---------->DOF2         --------->ARR11(3)                                       <----------DOF2       --------->YAB1            --------->AHL20(2)                                     ---------->ID1       --------->YAB1           --------->AHL20(2)                                    <-----------GT1 ----------->GT1  <-------TEIL  <---------AHL20(2)   atgtgttcttggcattcaagagacattagccatacatttttcttttttttcaaagagaaataatagtaaagttcatatcaacgatttaaatatatggtca  4432800                                                                                   <----------DOF2                                                                               --------->YAB1                  --------->CCA1(2)                                       <-------TEIL          <---------ARR11(3)                                           ----------->GT1     --------->YAB1                  --------->AHL20(2)                <---------MYB46(3)   <---------WOX13(1)           --------->AHL20(2)    <-----------GT1 --------->ALFIN1 -->GT1  <---------CCA1(2)  ---------->DOF2      ----------->GT1    <---------ANAC46   aattgaatgatatatctaagataccaatttgaaagaaaataaactaaaaaactgttaaactattttagtcgagtggttcattcatctttgaatttaagaa  4432900                            ----------->GT1               ---------->DOF2   --------->DAG2          ----------->GT1         ----------->GT1             ---------->DOF2  ---------->DOF2        ---------->DOF2        ----------->GT1  --------->MYB52(1)   acaaaaaagttgataagaaaagtttttgaaagttaaaaaacatgtgaagagagtagaaaatataaaccaagggtctgtttgtaaagccgaattatctgag  4433000                                         --------->YAB1                                        <---------ATHB12                                       <-----                                --------->DAG2        *TSS                                --------->ICU4          --------->RVE1(1)    ---------->DOF2      --------->MYB52(1)                 <---------AHL20(2)          --------->CCA1(1)----------->GT1       --------->YAB1                       --------->AHL20(2)   tcaaaacaaaaaatatcgcaactctaatagggtaaaagcgaaatcataaaaacataacgaagccctagtccaaaaatttctcatactataaaatgatttt  4433100                                                                     --------->LBD16                                                                    <---------ANAC58                                                                    --------->ANAC55(2)                                                                 <---------SPL7                                                                ========================MYC_MYB                                                                --------->O2                                                                =======================MYC_MYB                                                                =========================MYC_MYB                                                                <---------O2                                                                --------->TGA1a                                                                <---------TGA1a                                                                =====================================                                                               --------->ATERF1(1)                                                              ------>NtERF2                                                              <---------ATERF1(1)                                           ------>NtERF2      <---------DDF1                                          --------->DEAR3(1) ----------->HVH21                                        <---------ATERF1(1)  --------->RAP2.3(3)                                        ------>NtERF2        --------->DEAR3(1)                                       --------->ANAC58      --------->DREB2C(2)                                       --------->ANAC46     --------->ORA47(2)                                       --------->DEAR3(1)   --------->RAP2.3(1)                                       <---------ALFIN1     --------->DEAR3(2)                                       --------->ANAC58     --------->ERF1                                      --------->ORA47(2)   ------>NtERF2        <--------P                                      --------->RAP2.3(1) --------->DEAR3(1)   <-------GAMYB                                      <------NtERF2       ------->GAMYB       <---------DEAR3(2)                                      --------->ATERF1(1) ================MYC_MYB                                      --------->DEAR4(2) <---------MYB55(2)   <---------MYB46(3)                                     ------>NtERF2       --------->MYB46(3)  <---------TOE1(2)                                    --------->PCF5       --------->DEAR3(2)  <---------TOE2(2)                                    <---------TCP20     -------->P <-------TEIL<---------MYB52(1)                                    --------->PCF2      ------>MYB83<---------ANAC58                                  ------->GAMYB--------->ANAC46<------NtERF2<---------LBD16                                  ========================================MYC_MYB                               <---------DOF5.7(2)      ==================MYC_MYB                             --------->DOF5.7(2)        ------>MYB46(1)    ------------>AtMYB77                 <----------DOF2 --------->MYB46(3)    ==========================HOX2a_HOX2a     <---------ANAC58       --------->TOE2(3)<---------ALFIN1--------->At1g77200<---------MYB52(1)     <---------ANAC58 <-----------GT1<---------ATERF1(1)--------->SPL7----------->HVH21  ------------ ----AHL20(2)    <---------DAG2--------->MYB52(1)      ------>ZmHOX2a(1)  ------>ZmHOX2a(2) <--------   tttttttgcttcgctccctctttttcacttcgttaacggccccgcctccactctatcctaccgccgacgtccgtgatcgccggttagtcttcttctttct  4433200                                            <---------ZAT2                                            --------->ZAT2                                         <---------ANAC58                                         <---------ANAC58                  --------->ANAC58                                  --------->YAB1<---------ANAC46           --------->ANAC58         <                                 <---------ATHB12            <-----------HVH21  <---------ANAC46  ---                               --------->WOX13(1)--------->LBD16         ---------->DOF2          <-- ==bZIP_DOF                  <---------ATHB12  <---------LBD16          <------ZmHOX2a(1)       <---- --------->WRI1        <---------HSFB2a(2)  <---------At4g35610       <---------TOE2(3)        <----- --DOF2       <-------TEIL --------->GLK1(1)--------->At4g35610<-----------RAV1(2)       <---------AtMYB61   cttcgccctctcaacatacatcgttgcagaaatcaatcgtgtttcgagctgcgcgattgcattggtcaggtttaggaaagctatgtgtgttttggtagtg  4433300                                                       --------->LBD16                                                       =====================================HOX2a_HOX2a                                                       ------>ZmHOX2a(1)             ------>ZmHOX2a(2)            ---------->ID1                            --------->TOE1(2)            --------->ARR11(3)    <----------DOF2                                --------->ARR14(2)           ------->MYC3 ---------RAP2.6(2)                                <---------ARR14(2)           <-------MYC3 ------>ARR14(2)                       --------->At4g35610                    ------->TEIL -------ARR14(2)                     <-----------RAV1(2)                   --------->ANAC58 -----MYB46(3)                   <---------MYB46(3)<---------GLK1(1)     --------->MYB52(1) ----------AtSPL3     --------->GLK1(2)<---------At4g35610 ---------->DOF2 --------->ANAC58   gttcggctttatttggcctaaacaaatctagctattggttcagaagaaggtggaatcctgagaaagctctctaaacaacgcatgtgatctagcaattgga  4433400                                                                                                 <---                                                                      <---------ZAT18            <---                                                                 <---------ANAC46               -----                                --------->ARR14(2)               <---------ANAC58               <----                                <---------ARR14(2)               <---------ANAC58 <---------TOE2(2)                            <-------TEIL                   ------>ZmHOX2a(2)      <---------TOE1(2)                        <---------TOE1(3)                  =============================HOX2a_HOX2a                        <---------TOE2(3)         <---------AHL20(2)  --------->ZAT18           <---- <----------DOF2    <----------DOF2--------->TOE2(2)     <---------AGP1          ------>ZmHOX2a(1)   ttactttacaaaaattaagagtctttaaggtgcataacctgtgtgatagaatgtaattggatctatgacttgtggaccatttcctaggttttttaaaaga  4433500                                              <---------ANAC58 ------RVE1(1)               <------ZmHOX2a(1)<---------ANAC58 ------CCA1(1)           <---------O2         <---------ANAC46 ---->ARR11(3)      ------->GAMYB <---------YAB1  ---------->DOF2 -----GLK1(2)      --------->MYB46(3)      <---------WOX13(1)                 <----------DOF2 -----ARR11(3)   ----------->RAV1(1)     <---------ICU4  --------->ICU4      <---------DAG2        --   ttttttctgatatgtatgacaacagacacgaggattatgctagtaattgcctgaaagtattgatttttggagcctaaaaccttttgtatcattttggtga  4433600  Previous    Next  AGI:  At3g13580.1    Description:  60S ribosomal protein L7 (RPL7D). Identical to 60S ribosomal protein L7-4 (RPL7D) [Arabidopsis Thaliana] (GB:Q9LHP1); similar to 60S ribosomal protein L7 (RPL7C) [Arabidopsis thaliana] (TAIR:AT2G44120.2); similar to 60S ribosomal protein L7 (RPL7C) [Arabidopsis thaliana] (TAIR:AT2G44120.1); similar to unknown [Populus trichocarpa] (GB:ABK94792.1); contains InterPro domain Ribosomal protein L30, N-terminal (InterPro:IPR012988); contains InterPro domain Ribosomal protein L7, eukaryotic; (InterPro:IPR005998); contains InterPro domain Ribosomal protein L30, core; (InterPro:IPR000517); contains InterPro domain Ribosomal protein L30, C-terminal; (I Range:  from: 4433054    to: 4435312    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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