Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->HSFC1(1)                          <-------MYC2                          ------->MYC3                          <-------MYC3                          ------->MYC4    <---------ARR14(2)                 --------->YAB1             <---------MYB52(1) <---------HSFB2a(2)                     <-------TEIL    ---------->ID1        ------->MYC2    --------->ARR14(2)           --------->CCA1(2) ---------DOF2  <----------DOF2 <---------HSFC1(1)           --------->GLK1(2) ---------->DOF2 -----GT1  <---------ANAC58     --------->HSFB2a(2)   --------->ANAC58--------->ARR14(2) -DOF2     <---------ANAC58 --------->ZAT18           --------->ANAC58<---------ARR14(2)   tcttttgtcgttttcgttctttcagacatgtgctctagaaactggatttgcagagcaaggaagaatgtggaagatacaatgaaaagctagcgaagacagc  4427800                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   ----------->RAV1(2)                                                                   <---------ANAC58                                                       ------>MYB46(1)        <---------GLK1(2)                                  --------->AHL20(2)   ------>MYB83<---------AtLEC2                                  <---------ARR11(3) <---------MYB59       <---------HSFB2a(2)                                --------->ANAC58     <---------MYB111(1)   >>>>>>>ZML2                                --------->ANAC58     <---------MYB46(2)    --------->HSFB2a(2)                       <-------TEIL   <---------AHL20(2)       <---------ANAC58        <------NtERF2<                    <---------At4g35610            ------->TEIL<---------ANAC58 <-------TEIL      ---                    --------->At4g35610       ---------->DOF2 <---------At4g35610    <---------DEAR3(1)                  <-----------RAV1(2) --------->AHL20(2)      --------->ZAT2  --------->ARR14(2)  <--   aatgtgagacaatgaaacacccagatgcaaaatcaagaaattatatacaaaagtacctaattggagcttgcctggttctagattcactcggcgagaattc  4427900                                                     --------->At4g35610                            -                                                     <---------At4g35610                            <                                                     --------->ZAT2                                 <                                                     <---------ZAT2                             <----                                                  <---------At4g35610                        <-------                                                 <-----------RAV1(1)                       --------->ZAT14                                     --------->HSFC1(2)                                    <---------ZAT14           --------->ARR11(3)        <---------HSFB2a(1)                         ----------->GT1----- ------ZmHOX2a(2)                    <---------HSFC1(2)                         <---------ARR11(3) -- ------>At4g35610              ---------->DOF2--------->ARR14(2)                --------->ARR11(3)--- -------At4g35610        ---------->DOF2      <---------ARR14(2)          <-------TEIL     --------->ZAT18   agatcagagagaagaaattgagagaatgaaagaaaaagaagcctcgaggttttgctgctgagagacagagaacaggttcagagatgttactagtgtagtg  4428000    --------->DEAR3(1)  ------>MYB46(1)  ------>MYB83--------->ANAC58  --------->MYB52(1) --------->MYB55(1) -------->MYB46(3) ---------MYB55(2)   ----------->GT1 ---------ABI4(2)   --------->DAG2 -----ZAT18   --------->ANAC58        <---------ANAC58  <---------AHL20(2) --ANAC46   <---------ARR14(2)        <---------ANAC58  <---------YAB1 ---->ZAT14 --------->ARR14(2)<----------DOF2        <---------ARR14(2)               ----------->GT1 ------->DEAR3(2)  ---------->DOF2  <-----------GT1  --------->ARR14(2) ---------->DOF2 ---->TEIL <------ZmHOX2a(1)  <---------DAG2<----------DOF2    ---------->ID1       ---------->DOF2   aacccaccgaagaggaacccaaaaagtaaacacttttttttcttgtctttcggcgaatattatttgtcgaaattgaaaggaaatggaaaagaaaaaacaa  4428100                                                               --------->ALFIN1                                                             <---------ANAC46                                                        <---------AHL20(2)                                                 ------>ZmHOX2a(1)                                                --------------->AGL15                            --------->ZAT14     --------->TOE2(3)                     *TSS                            <---------ZAT14    ----------------->AGL3            --------->ALFIN1              --------->ATHB12              <----------DOF2  <---------ANAC58  <---------ANAC46            <---------WOX13(1)             <---------ICU4    <---------ANAC58  --------->ALFIN1    --   aaacaaattaagagattgatttgctctcagtaaactttggtttcatctttccttatatataatgcgtgggaaaccagagaggtgtgtttgtggaatagaa  4428200                                                  ------------>CBF                                                 --------->TOE2(3)                                                 --------->TOE1(3)      <---------AHL20(2)                                                ----------------->AGL1 <---------AHL20(2)                                              <-----------GT1          --------->AHL20(2)                                           <---------ICU4             <---------YAB1                                          --------->AHL20(2)        -------->ATHB1                                          <---------AHL20(2)        --------->ATHB51                                         <---------YAB1             -------->HAHB4                                       -------->ATHB1               <---------ICU4                                       <---------ICU4               <---------AHL20(2)                                      --------->ICU4                --------->YAB1                                      --------->AHL20(2)            <--------HAHB4                                      <---------ATHB51             <---------ATHB51                                      <---------AHL20(2)           --------->ICU4                                   --------->AHL20(1)              <---------YAB1                                   <---------AHL20(2)              <---------ATHB12                                   <---------AHL20(1)            --------->YAB1             ---------->DOF2      --------->AHL20(2)             <---------ICU4           --------->AtLEC2 --------->ALFIN1                 <---------AHL20(2)         --------->ZAT6           <-----------HVH21 ------->ALFIN1     ---------->DOF2--------->AHL20(2)    <-----------HVH21   --------->At4g35610   ggtgaggggaggcttcaaagttcaaagaagctctaaataaattattaattacctcaatgtgtcacactaattattaattagctcaacttgtcatccaaac  4428300                                                                              --------->ZAT18                                                                              <---------ZAT18                                                                            <---------At4g35610                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                      <---------AHL20(2)           <----------TaMYB80                                      --------->AHL20(2)          ---------->TaMYB80   --------->TOE2(3)        --------->DAG2       <-----------GT1           ---------->DOF2      --------->At4g35610       ---------->DOF2      --------->AHL20(2)     --------->YAB1<---------ANAC46--------->ANAC46   ccaaaaacaaaaaggaaatgaaaacatcatttaactacatataatttggccaatagtaaaagacatggcatatactatagctcacaaaacatcaaataca  4428400                                                                                         --------->ANAC58                                                                             --------->MYB46(3)                                                                           <---------DOF5.7(2) <-----                                                                         <---------MYB52(1)    ------                                                                 ---------->DOF2         --------->ANAC58                                                            --------->AHL20(2)           --------->ANAC46                                                            --------->AHL20(1)          --------->RAP2.6(3)                      <---------TOE2(3)         <---------AHL20(1)       --------->DOF5.7(2)  <------                <----------DOF2                 --------->AHL20(1)      <-------GAMYB--------->YAB1                <---------DAG2    --------->AHL20(2)        <---------AHL20(1)       -------->HAHB4             <-----------GT1 --------->AHL20(2)--------->YAB1  <---------AHL20(2) --------->YAB1   actaagttttgcattatactttttaagaaaatcaaataaaacagttcaaaaatattaacaaatattttaaagtccgttaacaactaataatacggcaata  4428500         --------->YAB1        <---------YAB1      --------->YAB1                                                                              <-- ----KAN4(1) ---------->DOF2            --------->ANAC58                --------->ANAC58   <---------ANAC58 --->KAN4(1)<---------AHL20(2)          --------->ANAC58                --------->ANAC46   <---------ANAC58 ---KAN4(2) --------->AHL20(2)    --------->AHL20(2)                    --------->ANAC58<----------DOF2   ttccaccttcataataaaagaatactaaattaacaaataaacaagaaaacaagattgtaagaggctcgattaccacgctcttctcattttctttcgtttt  4428600                                          <---------ANAC46                                          <---------ANAC58                                          <---------ANAC58                    --------->ARR11(3)   <-------TEIL                  <---------AHL20(2)    --------->CCA1(2)                 --------->AHL20(1)    <---------ARR14(2)                 --------->AHL20(2)    --------->ARR11(1)                 <---------AHL20(1)    <---------GLK1(2)                                         <---            <---------AHL20(2)         --------->ARR14(2)                                        <---            --------->AHL20(2)        <---------HSFB2a(1)        <---------AtLEC2                <---        <---------AHL20(2)           ----------->ARR10          <-------TEIL        <---------ANAC46       <---------YAB1        --------->YAB1 <---------MYB52(1)<-------MYC3          <---------ANAC58 ---------GT1   --------->YAB1 ---------->DOF2                ------->MYC3          <---------ANAC58   ataccaatttttatttaaatataatcttgaatcaaaagaaagattcgtgagtttgctaatttcatgtgcatgactcccaaatgttttcttggaaatgttt  4428700  Previous    Next  AGI:  At3g13560.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 4 precursor [Arabidopsis Thaliana] (GB:Q94CD8;GB:Q9LJD6); similar to glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] (TAIR:AT2G01630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72077.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 4425234    to: 4428186    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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