Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ----------->GT1 <---------ARR14(2) --------->ARR14(2) ------->LBD16 ------------>AGL15                       --------->YAB1                         <-----------GT1<---- --------------AGL1                      <---------ATHB12         --------->AHL20(2)            ----- ------LBD16                         <---------WOX13(1)  --------->ALFIN1   <---------DAG2      <---- --------------AG                 --------->ICU4    ---------->DOF2         <----------DOF2    ------ ------------->AGL1           <---------ATHB12    <---------AHL20(2)  <---------AHL20(2)       <----- ------GT1               ---------->ID1--------->YAB1 --------->DAG2 --------->AHL20(2)       -------   cccgatttgtaaaaatactagcattttgtccaattactgattaatcatctatttaaaaggtggtccaaatatttaatgctttttcactggtgtcaatttt  4419800       <-------GAMYB      --------->MYB111(2)      ----------->GT1      --------->MYB55(2)      <---------MYB46(3)                                                                            <     --------->ALFIN1                                                                              --  <---------TOE1(3)                                                                                <-  <---------TOE2(3)                                                                          -------- -----YAB1                       <---------ATHB12                  ----------->GT1           -------- ---->AHL20(2)                 <-----------GT1                  --------->At4g35610         <-------- -----AHL20(2)       <---------TOE2(3)          <----------DOF2 --------->ZAT2<---------TOE2(2)    -- --->AHL20(2)    --------->TOE2(3)     ----------->GT1          <---------ZAT2<---------TOE1(2)    <- ----AHL20(2)  --------->ICU4  --------->WOX13(1)               <---------At4g35610       --------->WOX13(1) -->YAB1<--------P<---------YAB1-------->P   <-----------GT1  <------ZmHOX2a(1)   <---------YAB1  ---   aattaaggtggttagtattcattaatgtattatcaaccattttgttataactttctcaattgtaggagctggtataatcggatgtttatagccaatcaaa  4419900                                                   --------->TOE2(2)     --------->YAB1                              -------->P ---------YAB1                                <---------MYB52(2) ------->AHL20(2)            <---------AHL20(2) --------->MYB52(1)                            <------ --------AHL20(1)            --------->AHL20(2)------->GAMYB                                 <------- ->AHL20(2)           --------->TOE2(3)       --------->MYB46(3)                            >>>>>>>>>ARR2 ->YAB1               <----------DOF2         <---------MYB111(1)                           >>>>>>>>>ARR1 -ATHB12           --------->ARR11(3)    --------->ANAC58     --------->YAB1               --------->ATHB12 ------->AHL20(1)  <---------ARR11(1)    --------->ANAC58    <---------YAB1       <---------GLK1(1) --------AHL20(2) <---------CCA1(2)      --------->ANAC46  ----------->GT1        --------->GLK1(1) ------>YAB1<XXXXXXXXXXXXXXXXXXXXMIR1886.3    <---------MYB46(2)    --------->TOE2(3)     <---------YAB1   ttataattcatagtagtatcaaatctttaatataaataactagaagcaactaacctatgcattgtaataacattagccatttggatttcaatatgattgt  4420000                                                                          --------->ANAC46                                                                        ------>MYB46(1)                                                                        ------>MYB83  <---------ANAC58                                                                        --------->MYB52(1)                                       --------->At4g35610             --------->MYB55(1)                                       <---------At4g35610            <---------MYB59 <---------ANAC46                                       ----------->GT1                <---------MYB46(2) <-----------HVH21                     ----------->GT1   --------->ZAT2           <---------ICU4   --------->ZAT2      <---------ARR11(3)              <---------TOE2(2)        <---------YAB1--------->DEAR3(1)    --      --------->ARR11(3)             <-----------RAV1(2)    <---------YAB1------->GAMYB <---------ANAC58      --------->GLK1(2)            --------->ANAC46      <---------ATHB12--------->MYB46(3)      ---- ---MYB46(3)         <----------ID1--------->ANAC58    ------>MYB83<-----------GT1    <---------ANAC58 --WOX13(1)       ---------->DOF2  --------->ANAC58    ------>MYB46(1)--------->MYB46(3)<---------ANAC58   tactgcaaaatctttaaaatgaaaggaaaaaaaaaccacgcaggtgaaataaaaaccaaatgaagattattaccaaacgccgaagctagcgcgtgagaga  4420100           <-------TEIL        <------MYB83        <------MYB46(1)       --------->MYB59       --------->MYB46(2)       --------->MYB111(1)      <---------MYB55(1)      <--------P--------->YAB1     <---------MYB52(1)     <-------GAMYB                                                               <---------ARR11(3)    <------MYB46(1)                                                              --------->ARR11(3)    <---------DEAR3(2)                                                          *TSS    <------MYB83----------->GT1                                            <---------ATHB12   --------->MYB59                                                        ------>MYB46(1)       -----   --------->MYB111(2)                                                 ------------>CBF         <----   <---------DEAR3(1)                                                  --------->MYB46(3)       -----   --------->MYB46(2)     <---------At4g35610                         --------->ANAC58          -----   <---------MYB46(3)     --------->ZAT2                              --------->ANAC58          -----   --------->MYB111(1)    --------->At4g35610              ----------->GT1------>MYB83       <------ZmHOX2a(2) ------->DAG2<------------CBF                     <----------DOF2   --------->MYB46(3)      <-------- ------>DOF2--------->ATHB12     --------->MYB52(1)      ---------->DOF2--------->AtMYB61   ---------   aaaggtcggtaggttcattggtaacatcagcagactaatggagagagagaaactttgagaaaagaaaaaaacaaccaatcgaagaactcatagagatcac  4420200                                               <-----------HVH21                                              --------->TGA2(1)                                              <---------bZIP60(1)                                              <---------TGA2(1)                                              --------->bZIP60(1)                                         <---------At4g35610                                       <------NtERF2       <---------ZAT6                <---------ANAC46    --------->STY1(1)                <---------DEAR3(1)    <---------STY1(1)               <---------LBD16                                              ----  --------->TOE2(3)                 --------->ATERF1(1)                                          ---- ---->ANAC58                        <------NtERF2  <---------O2                                  ---- -----ANAC55(2)                    <---------RAP2.3(1)          --------->ANAC58          --------->ALFIN1 ---->ANAC46                       <---------ORA47(2)           --------->ANAC58          <---------- ---->ANAC55(2)                   <---------RAP2.3(2)   <---------ANAC46                <---------ANAC46 ---->ANAC58           <----------DOF2--------->LBD16 <---------ANAC46                ------->GAMYB -ARR11(3)        ---------->DOF2 <---------DEAR3(1) <---------AtMYB61               --------->ANAC46 >ARR11(3)---------->DOF2         <---------RAP2.3(3)--------->ALFIN1                --------->DEAR3(1)   gaaaccctagtggaaagagagaaagctttgttgaagacggcggagatgatgtcatgtggtgggaagaagccagtgtctaagaaaacaacgccgtgttgca  4420300                                                                                          ------>ZmHOX2a(2)                                                                                          ===========                                                                                         ============                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                     <------NtERF2                                                         <-------TEIL               ------>NtERF2                                                      <---------At4g35610          --------->ALFIN1                                               <---------ANAC58                <---------ORA47(1)                                          ----------->ARR10                   <------ZmHOX2a(1)  ----   --------->ALFIN1            <---------MYB46(3)     --------->At4g35610     ==================HOX2a_HOX2a ----->ANAC58                 --------->ALFIN1 <---------ANAC58  ---------->DOF2   <---------DEAR3(1) ----->ANAC58              <---------DEAR3(1)--------->GLK1(2) <---------YAB1 ===================HOX2a_HOX2a ----->ANAC46             <---------ORA47(1)<---------GLK1(2)  <---------TOE2(3)<---------DEAR3(1) -RAV1(1)         <------ZmHOX2a(1)<------ZmHOX2a(1)<---------ZAT18      --------->ALFIN1<------ZmHOX2a(2)   cgaagatggggatgaagagaggaccatggacggtggaggaagacgagattcttgtgagcttcattaagaaagaaggtgaaggacggtggcgatcgcttcc  4420400                                                                                                 ====                                                                                             <-------                                                                                             <-------                                                                                          <---------SPL7                                                                                          -----------                                                                                         --------->TOE1(1)                                                                                       <-----------HVH21    <---------At4g35610           <---------ANAC46                                    <---------ANAC58    --------->At4g35610         <-----------HVH21                               =====================    <---------ZAT2           --------->At4g35610          ----------->HVH21--------->ALFIN1 ---------    --------->ZAT2           <---------At4g35610          <---------ETT(1)<-------MYC3<---------ANAC58 ===HOX2a_HOX2a         ---------->DOF2                   --------->DEAR3(1)    ===================== ===HOX2a_HOX2a  --------->At4g35610        <---------MYB46(3)     <-------GAMYB<------ZmHOX2a(1)<--- -->ZmHOX2a(1)   <---------At4g35610       --------->ALFIN1------>NtERF2  ------->MYC3<---------ANAC46   taagagagctggtttactcagatgtggaaagagctgtcgtctacggtggatgaactatctccgaccctcggttaaacgtggaggaattacgtcggacgag  4420500   ------>ZmHOX2a(2)   ================================HOX2a_HOX2a   ==============HOX2a_HOX2a  =================================HOX2a_HOX2a  ===============HOX2a_HOX2a  <------ZmHOX2a(2) <---------AGP1 <-----------ARR10 <---------ARR14(2) <---------ARR11(3)            <------NtERF2 --------->ARR14(2)      ------>NtERF2 --------->ARR14(3)     <---------ALFIN1                                --------->ANAC55(2) --------->ARR11(3)     --------->DEAR3(1)                     --------->ARR11(3) <---------ARR14(3)   --------->ABI4(1)                        --------->GLK1(2) =========HOX2a_HOX2a <---------ATERF1(1)                      <---------ARR11(3) --TOE1(1)            ------>NtERF2                         --------->AHL20(2) --TOE2(1)           --------->ANAC46             --------->ARR11(3)    <---------ANAC55(2) >HVH21            <---------At5g28300     <---------AHL20(2) --------->RVE1(1) ========HOX2a_HOX2a <---------ALFIN1----------->GT1   <---------AHL20(2)                   ------>ZmHOX2a(2) >SPL7    ------>ZmHOX2a(1) ------>ZmHOX2a(1)     <---------ARR11(3)<-----------HVH21      <------ZmHOX2a(2) =========HOX2a_HOX2a--------->DEAR3(1)    --------->AHL20(2) --------->CCA1(1)           <---------ARR11(3) ---ZmHOX2a(1)    <-----------GT1----------->RAV1(1)   --------->AHL20(2)                 --------->ARR11(3)   gaagatctcatcctccgtcttcaccgcctcctcggcaacaggtatatatatagatattaaaaaaaaatctcgtcaagtattcaactatacaagatcgttt  4420600                                                                                                    -                                                                   <---------ZAT2                   <                                                                   --------->STY1(2)                -              ------->TEIL                          <---------AHL20(2)                             <-           <---------ANAC55(2)               <---------ZAT6        <---------STY1(2)               <-           --------->ANAC55(2)         --------->ZAT6              --------->ZAT2       --------->ANAC46   agtttatatgcatacgtatgtgtgtgtctctctctacccatacactagagttatttttttgtttaagctagctagggttttatttcttccacataaacat  4420700  Previous    Next  AGI:  At3g13540.1    Description:  ATMYB5 (MYB DOMAIN PROTEIN 5); DNA binding / transcription factor. similar to AtMYB17 (myb domain protein 17), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G61250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23466.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 4420180    to: 4421708    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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