Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------TOE2(3)       --------->ZAT14  <---------RVE1(1)       <---------ZAT14 --------->ARR14(2) ---MYB46(1)           <---------GLK1(2) ------->GT1           <---------ARR14(2)       <---------ANAC58             --------->LBD16 ---MYB83              <---------ARR11(3) --------->ATHB12                  --------->ANAC46 ---->MYB59            --------->ARR11(3)<---------YAB1----------->GT1   <---------ARR14(2) ---->MYB46(2)<---------AHL20(2)     ----------->RAV1(1)   <---------KAN4(2)--------->ANAC55(2) ->ATHB12     <---------YAB1 ---------->DOF2    <---------ANAC58         --------->ARR14(2)        --   ggtaaacagtgaagtttttattgcagatttttaaagtagcaacatgatttgcctatggggaaatattctttgtaatatccgtaagagaatagaagaaaca  4366900                             =======================HOX2a_HOX2a                            --------->CCA1(2)                            <------ZmHOX2a(2)                            ========================HOX2a_HOX2a                           <---------ARR11(3)                           <---------AGP1                            --------->ANAC46                           --------->ARR11(3)                    --------->GLK1(2)                           --------->AGP1                       <---------ARR14(2)                    <---------AHL20(2)                          --------->ARR14(2)               <---------YAB1------>ZmHOX2a(2)              <------NtERF2     --------->YAB1--------->AHL20(2)        <------ZmHOX2a(1)  <---------GLK1(2) ------->CCA1(2)--------->YAB1    --------->YAB1           ------>NtERF2   gatataaacataatgttatcattttataagatctaatgacaacttgaggagactaacttggtgccagattccagccattttagtctctctatttgactcg  4367000                                                ------>NtERF2                                      --                                               <---------PCF2                                      <-                                          <---------ANAC46                                         <-                                     <---------O2                     <-----------RAV1(2)          --                                     <---------ANAC58            <---------MYB55(2)             <----                          --------->YAB1  <---------ANAC58       --------->DEAR3(1)            ------                         --------->ICU4<------NtERF2             --------->MYB46(3)        <---------SPL7                  <---------AHL20(2) <---------bZIP60(2)       --------->MYB52(1)        <---------ANAC58                 --------->AHL20(2)  <---------ANAC46         --------->AtMYB61          <---------ANAC58                 <---------AHL20(2)  <---------ANAC58         <---------ALFIN1           ------------              ----------->GT1  ------->TEIL --------->ALFIN1 --------->MYB46(3)          ------------             <---------YAB1 <---------YAB1<---------ANAC58   <---------MYB55(2)         <---------LBD16   agttctccaactcatatgattaaatgaatgatgaatatggcgtggcatggggcctaatgttgaaccaccggcccatgtgaattgcgaagttgcggtacta  4367100    --------->ATHB12   <---------AHL20(1)   --------->AHL20(2)                                                                   <---------DEAR3(2)   <---------AHL20(2)                     --------->AHL20(2)                         <-----------HVH21   --------->AHL20(1)                     <---------AHL20(2)                        --------->ANAC46 ------->AHL20(2)                        --------->AHL20(2)                         <---------TGA1a --------AHL20(2)                  --------->AtLEC2              ----------->GT1    --------->TGA1a --------AHL20(1)                <---------ANAC46          <---------AHL20(2)       <---------O2 ------->AHL20(1)                <---------ANAC58         --------->YAB1            --------->O2 -----ICU4                       <---------ANAC58  <---------WRKY18(1)              --------->bZIP60(2) --->ICU4                    <---------HSFC1(2)   --------->WRKY38(1)       --------->ANAC55(2)    -- --->AtSPL8                  <---------HSFB2a(1)  --------->WRKY12          <---------ANAC58       <- --->AtSPL3 <---------MYB59  --------->HSFC1(2)   ----------->HVH21         <---------ANAC58      <--   attaattaattgggcctaatagtagccaaggagtttcgtgcaaattaattctttgacctataaaaattggtataacttacttatccacgtcggtctgact  4367200                                                                      <---------GLK1(1)                                                                      --------->GLK1(1)                                                                     --------->ARR11(3)                                     --------->DAG2                  <---------ARR11(3)                           --------->YAB1                            --------->ARR14(2)                           <---------ICU4   <---------WRKY12         <---------ARR14(2)                           --------->AHL20(2)                        <---------AGP1                           <---------AHL20(1)                       <---------CCA1(2)                           <---------AHL20(2)                    --------->LBD16         ----------->ARR10 <--------ATHB1   <---------WRKY38(1) <---------ANAC58    <---------TOE2(3)     --------->ICU4  <-----------HVH21     <---------AtLEC2 ------->YAB1           --------->YAB1   <----------ID1         <---------ANAC46                ----- -------HAHB4  --------->ATHB12     ---------->DOF2     ---------->DOF2------>ZmHOX2a(2)*TSS -------- -------YAB1--------->CCA1(2)--------->ICU4 <---------WRKY45    <---------ANAC58<---------MYB52(1)---   attattaagatgagatttgattagattaataattttgaaaaaggggtcaaagactcaaaaaagtctgcgtggatctccagccgttttcagacacttaccc  4367300               <---------DEAR3(1)         ====================HOX2a_HOX2a                                                          <--  --------->AHL20(1)     <----------DOF2        <-----------RAV1(1)                          --------  <---------ARR11(3)  ===============================HOX2a_HOX2a                            <--------  <---------AHL20(1)  ------>ZmHOX2a(2)       <----------DOF2                              <---------ARR14(2) ---->ANAC46<---------DEAR3(1)                ------>ZmHOX2a(1)                            --------->ARR14(2) >P      ------>ZmHOX2a(1)    --------->At4g35610 ---------->ID1                     <----------DOF2 ------>ANAC46<------NtERF2   <---------At4g35610<-----------HVH21               ---------->ID1  ----   acaaaatattcctctcggcgatgatccctttctgctgaatttttggtcctttgtcgctcgactgttttcttcgtctactatttgttccttttggatattc  4367400            --------->ATHB12                          --------->ARR14(2)    <---------DAG2                                    <---------GLK1(2)    <----------DOF2                                   <---------ARR14(2) -------LBD16                     --------->AHL20(2)--------->LBD16 ->KAN4(2)<---------MYB52(1)    ----------->GT1    --------->LBD16 -GLK1(1)<-------GAMYB        <--------P<-----------GT1      ------>ZmHOX2a(1) ----------------->WRI1     ----------->GT1       <---------LBD16---------->DOF2             <-------   ttcggacttttcgttgatttgattttcaagaggtaagttaataaaccgtgttccccgattctcctattaaagaggtttgtgatgtttttgatttctaggt  4367500                                                      <---------WOX13(1)                                                    --------->ATHB12                                                  --------->LBD16                                                 <---------ANAC46                                                 <---------ANAC58                                                 <---------ANAC55(2)                                                 <---------ANAC58              <---------ANAC58                                                 <---------ANAC55(1)           <---------ANAC58                                                 --------->ANAC55(2)       -------->HAHB4                                            --------->HSFB2a(1)            --------->ATHB12                                           --------->ARR14(2)             --------->ICU4       <-----                                           <---------ARR11(3)             <---------YAB1    <--------      <---------ANAC46                     <---------ARR14(2)      ----------->GT1--------->ATHB12 <-----------RAV1(1)     <---------GLK1(1) --------->ARR11(3)  --------->ATHB12<---------ANAC55(2) --TOE1(2)    <-----------GT1              <-----------ARR10  <---------YAB1   --------->ANAC55(2)   tttttgttgtttgaattttctcgtttgaaatctctaatctctacaaatcttccgtgattgagttttgattagtaaaatgattcgtgatttgattttgatt  4367600                           <<<<<<<<<<MYB80                          <------MYB83                          <------MYB46(1)                         <---------AtMYB61                         --------->MYB59                                       <XXXXXXXXXXXXXXXXXXXXMIR1886.3                     <------MYB46(1)                                      <---------ANAC46                     <------MYB83                                         <---------ANAC55(2)                     <---------MYB46(3)                                   <---------ANAC58                   <--------P                                             <---------ANAC58                  <---------MYB52(1)                                  <----------DOF2 ----GLK1(1)     <---------MYB46(3)          <---------YAB1     <---------ARR14(2) -YAB1<---------YAB1<---------AtMYB61      <---------At4g35610  --------->ARR14(2)             ------   tctctgtttttattatctctggttggtttggtttgatcaagtctctgatgctagggttcgatatcgtttctgcatttcgtaagaagaaacctttggttta  4367700                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                         ----------->HVH21                                                                                       <---------bZIP60(1)                                          --------->ANAC58                     --------->STY1(2)                        <---------At4g35610     <------ZmHOX2a(1)    <---------At4g35610<-----------HVH21         <---------AHL20(2)               --------->ANAC58        <-------TEIL <---------STY1(2) ---- --->AHL20(2)        ---------->DOF2      --------->ANAC46     --------->At4g35610     --------->bZIP60(1)   aatctcagtgttttatttggctatgaagcagagagagtttgaacaaggaaggattgaactatggaagatgcatcagagactagctactggtgtcacatgt  4367800  Previous    Next  AGI:  At3g13430.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G55530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22124.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 4367288    to: 4368827    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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