Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ARR11(3)                                                                 --------->AHL20(1)                                                                --------->CCA1(2)                                                         --------->ATHB12                                                         --------->YAB1                                                        --------->ICU4                                                        <---------YAB1                    <---------YAB1                    -------->HAHB4                    --------->ICU4                    --------->YAB1               --------->ANAC58                       <---------ICU4               --------->ANAC55(2)                   <---------ATHB51                            ----               --------->ANAC58                      --------->ICU4                             >>>>>           --------->YAB1                          --------->YAB1<---------AHL20(1)            <----- ------->YAB1  --------->ANAC46                  --------->At5g28300   <---------YAB1  --------->AHL20(2) -------YAB1 --------->ICU4 <---------CCA1(2)   ----------->GT1--------->ARR11(3)      <---------AHL20(2)   atgataaactttgtcataagtaactattgtatatcatctatagtttaagacagtaattatgattagatatattgtgtttgagacaatatttattttttaa  4341300                     <---------YAB1                    --------->TOE2(3)                   <---------ICU4                   --------->YAB1                 <-----------GT1               --------->AHL20(2)              <---------YAB1                                                                    -----            --------->ATHB51                                                                    -----            <--------HAHB4                                                                      <----         --------->YAB1                                          <---------AHL20(2)             -----        <---------YAB1                                          --------->YAB1                  <----      <---------CCA1(2) <---------YAB1                   --------->YAB1<-------TEIL             <---- ----->YAB1 <---------ICU4         --------->AHL20(2)   <---------ATHB12       <---------ARR14(2) >>>>MYB98 <---------YAB1--------->YAB1       <---------ANAC46  --------->AHL20(2)         --------->AHL20(2) ------GT1 --------->ICU4<-----------GT1    <---------YAB1--------->GLK1(2)    --------->ARR14(2) <--   cataattcatatcattattaaacattataacaatacattatatgttttgagtgaatcaataatctattatatatacatacaaatactcacatttttaata  4341400             --------->WOX13(1)            --------->MYB46(3)           ------------>CBF       ----------->GT1       <---------REM1(1) ---->AHL20(2) ---->ARR11(3) -----AHL20(2) ---->AHL20(1)  <--------HAHB4 -----AHL20(1)  <---------ICU4                           <----------DOF2 ------------>CBF -----ARR11(3)  --------->YAB1                   <<<<<<<<<TBF1     ------------>CBF ----------CBF <---------ATHB12     ---------->DOF2 <<<<<<<<<TBF1<-----------GT1 <-----------GT1-----   tattgtaagttgtaacaatcattttctatcaacaaaaaaaaagacaacttcttcttcttctttttttctaccaatttcaattttcacatccccatttcct  4341500                                                                                                    -                                                                                                  ---                                                                                                  ---                                                                                               <-----                                          <---------ANAC58                                     <-----                                  <---------ALFIN1                    <---------ARR14(2)       <-----                                  --------->ANAC46    --------------->AGL15                    <-----                                 --------->MYB46(3)   ----------------->AG                <---------ANAC46                               ------>NtERF2          <---------------AGL15               <---------ANAC58                     --------->ICU4       <---------ANAC46            --------->ARR14(2)  <---------ANAC58  ------>ZmHOX2a(1) <---------TOE2(3)     <---------ANAC58           <---------CCA1(2)  <---------ANAC46 ->ZmHOX2a(1)      --------->YAB1<---------MYB55(2)  ----------------->AGL2    <-----------GT1 <-----   agtcctaaaaaaaacctcgaataatgttgatgcctcccaccatgtcttgtttgattcccaaaatagttttcatatcccttatcacttgttttgtgtgtcg  4341600                                                                                      <---------AHL20(2)                                                                                     <---------AHL20(1)                                                                                     --------->AHL20(2)                                                                                     --------->AHL20(1)  <---------DAG2                                                              ------>ZmHOX2a(1) ------>TEIL               <<<<<<<<<GATA-3                                <---------ARR14(2) ------>WRKY12             <<<<<<<<<GATA-2                                --------->ARR14(2) ------>WRKY38(1)          <<<<<<<<<GATA-1                              --------->HSFC1(2) ----O2                    <<<<<<<<<GATA-4        -------->P            <---------HSFB2a(1)      ---- ----ANAC58 --------->ANAC58                   <---------MYB52(2)       --------->HSFB2a(1)  -------- ----ANAC46 --------->AtLEC2       <---------ATHB12      --------->YAB1 <---------HSFC1(2)   -------- ----ANAC58 --------->ANAC58      <-----------HVH21 ------->GAMYB      <---------TOE1(3)     -------- ----bZIP60(2)            --------->ARR14(2) <-----------ARR10         <---------TOE2(3)    <--------   tggaccttatgcccatgcaagaagtttgaatccaccagtcatgggagaaactaacccgctcataaaaacgatgaaggttcctgtgaatataatctacgga  4341700                                                                                               ------                                                                                         --------->DAG2                                                                                         xxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                      <---------YAB1                                                                                     <xxxxxxxxxxxxxxx     --------->DAG2                                                              xxxxxxxxxxxxxxxxxxxx     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                        <---------MYB46(3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                         ----------->GT1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <---------TOE2(2)    ---------->DOF2   <-----------RAV1(2)                                      <xxxxxxxxxxxxxxxxxxxxx   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  --------->CCA1(2)  <---------ANAC55(2)<----  <---------YAB1 <---------YAB1                     --------->AtMYB61        <---------ANAC46--------  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <----------DOF2                 <---------LBD16 --------- ------->GT1<---------At4g35610     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->AHL20(2)xxxxxxxxxxxx ->ANAC58  ------->TEIL<---------TOE2(3) ------->TEIL---------->DOF2  --------->AHL20(2)---------->DOF2 ->ANAC46--------->ZAT18         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------AHL20(2)<xxxxxxxxxxxx ->ANAC58<---------ZAT18       <-----------HVH21--------->MYB46(3) ------->TEIL<xxxxxxxxxxxxxxxxxxxxx -LBD16 --------->ALFIN1   ---------->DOF2 <---------DAG2--------->ARR11(3)--------->MYB52(1)<-------   agttataaaagtggacctgatgattcaggtaaaggtcacgatgcacctttaccaccaaagataccgatgaatataaattacggaggttataaaagtggac  4341800                                                                               ------->TEIL                                                                         --------->DAG2                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <-----------RAV1(2)                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------YAB1                                 <---------YAB1          ---------->DOF2 ->TEIL<---------TOE2(3)                 <---------GLK1(2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxx>smallRNA(se3)                <---------ARR14(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxx>smallRNA(si3)                 --------->ARR11(3)           <---------YAB1       <---------TOE2(3) xxxxxxxxxsmallRNA(le3)                  <---------ARR11(3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xsmallRNA(i)                            --------->ARR14(2)      ----------->GT1<---------At4g35610 xx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   --------->ZAT18 xxsmallRNA(fl3)     --------->ARR14(2)  --------->ARR11(1)      <---------MYB46(3)       <---------- -----At4g35610      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ->ZAT18           --------->ANAC58  ---------->DOF2            <---------TOE2(2)    <---------YAB1 >ALFIN1           --------->ANAC58 --------->AtMYB61          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxx>smallRNA(i2)<---------ALFIN1--------->YAB1      <---------LBD16 --------->ALFIN1 xxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxsmallRNA(i)  <- xsmallRNA(si3)<-----------HVH21--------->MYB46(3) ------->TEIL<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --ZAT18   ---------->DOF2  <----------DOF2  --------->ICU4--------->MYB52(1)<---------ZAT18   ------   ctgatgattcaggtaaaggtcacgatacacctttaccaccaaagatactgatgaatataaactacggaggttataaaagtggacctgatgattcaggtaa  4341900                                                               ------->TEIL                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                      <---------YAB1                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 ----------->GT1<---------At4g35610                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 <---------MYB46(3)                                     --------->AHL20(1)  --------->DAG2    <---------TOE2(3)                                     --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ZAT18                 --------------->AGL15          <---------TOE2(2)    <---------YAB1                 -                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxsmallRNA(i)                   -                 <---------------AGL15       --------->ANAC46--------->ZAT18            xxxxxxxxxxxxx                 ====================================================================================                <-----------------AGL1      <---------LBD16 --------->ALFIN1   ---------->DOF2  <----            <----------DOF2        ------->TEIL<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxx -RAV1(2)------->TEIL---------->DOF2 <---------AHL20(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <----- ----------HVH21----------------->AGL1<---------AHL20(2)---------->DOF2   <-----------RAV1(2)------->TEIL ---->DOF2 <---------DAG2   --------->DEAR3(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<-----------HVH21<   aggtcacgatgcacctttaccatcaaaggtaccgatgaatataatctacggaggttataaaagtggacctgatgattcaggtaaaggtcacgatgcacct  4342000     ---------->DOF2 --------->AHL20(2)    --------->AtMYB61--------->AHL20(1) --------------->AGL15                                     ---------->DOF2 ---------------->AGL1                           --------->AtMYB61 -------->MYB46(3)   <---------AHL20(1)      <---------ZAT14 xxxxxxxx>smallRNA(si3)               <---------YAB1  --------->MYB46(3) ================MADS_MADS   --------->ANAC46--------->ZAT14                <---------AHL20(2) ------DOF2        ------->TEIL   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->AHL20(2)       < xxxxxxxxsmallRNA(se3)      <---------LBD16  <---------ZAT18               <---------AHL20(1)       < ----DAG2   --------->DEAR3(2)--------->LBD16--------->ZAT18             ------->TEIL       <-------- -----------------AGL1<---------AHL20(2)---------->DOF2   --------->AtMYB61--------->AHL20(1) -------   ttaccaccaaaggtaccgatgaatataatctacggagattataaaagtgcaccatcaccaccaaaggtatcgatgaatataatctatggaagttataaaa  4342100                                                                                     ------->TEIL                                                                                   <---------ZAT18                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                       <---------MYB46(3)                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                       ----------->GT1<---------At4g35610                                                                      <---------TOE2(2)                                                                  <---------LBD16 --------->ALFIN1 <-               <------ZmHOX2a(1)                            <---------AHL20(2) --------->DAG2   <----       --------->ICU4                                      --------->AHL20(1)  xxxxxxxxxxxxxxxxxxxxxx       <---------YAB1                                      --------->AHL20(2) ---------->DOF2  <xxxxx     <---------ICU4                       --------->AtMYB61<---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxx     --------->YAB1                     ----------->RAV1(1)<---------AHL20(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------YAB1                    --------->MYB46(3)  --------->YAB1    <---------YAB1 <---------YAB1    --------->ICU4                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -----------TGA1                 --------->AtMYB61    <---------MYB52(1)   <xxxxxxxxxxxxxxxxsmallRNA(i) ---------RAP2.6(3)            ------->TEIL         --------->ANAC46 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         ----------->GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --->DOF2   <---------LBD16  <---------ZAT18     --------->MYB52(1)--------->ANAC46--------->ZAT18---   gtcgtcatgatgattcaggaagaggtcacaatgcaccatcaccaccaaaaatacccgttaatataatctacggaggttataaaagtggacctgatgattc  4342200  Previous    Next  AGI:  At3g13370.1    Description:  similar to unnamed protein product [Homo sapiens] (GB:BAC86381.1) Range:  from: 4341671    to: 4342237    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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