Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------GLK1(2)                                                                                   <---------ARR14(2)                                                                                   --------->MYB52(1)                                                                                   --------->ARR14(2)                                                                             <---------ZAT14                                                                           --------->ZAT18           <---------At4g35610                                             --------->ZAT14           --------->At4g35610                                             <---------ZAT14          ------->TEIL               --------->ANAC55(2)                   <---------ZAT18 ---------HSFB2a(2)                  <---------ANAC55(2)                 <---------------AtSPL8    <- -------->HSFC1(1)              --------->ATHB12                      <---------YAB1    --------->ARR14(2) ---------HSFC1(1)              <---------ICU4       --------->HSFB2a(2) --------------->AtSPL8    <- -------->HSFB2a(2)            --------->ICU4   <---------AHL20(2)    <---------ATHB12  <---------ARR14(2)   ttctcgaagttgcatctgaataacattgtagtattgattacgagattgaatttatctcgaatagtgagtctaatgagtgtacacatatcggattttggat  4331400                                    --------->AHL20(1)                                    <---------AHL20(2)                                    <---------AHL20(1)                               --------->AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                               <---------AHL20(2)                              --------->YAB1              <---------TGA1a<---------YAB1       --------->ZAT14              <---------ANAC46<---------ICU4    --------->ZAT18              <---------O2 --------->YAB1 --------->ANAC55(2)                --------->TOE2(3)              --------->TGA1a--------->ICU4     --------->ZAT14             ----------->GT1           --------->ANAC46<---------ICU4 <---------ANAC55(2)              <---------TOE2(3)     ---------->DOF2      <---------YAB1 <---------------AtSPL3         --------->ARR11(3)     ===================bZIP_DOF<---------YAB1  <---------ZAT14         <---------ARR11(3)      <---- --------PCF2 <---------bZIP60(2)   --------->AHL20(2)                 --------->YAB1     --------->ZAT6 --------PCF5 --------->O2--------->ICU4 <---------------AtSPL8     --------->LBD16     <-----------GT1   gggaccataaaacacgacgtggtatttgataattataatttattaagtactgtactgtctgtctgtgttccgaagataatgttaaacaaataacaccaca  4331500                                                                                  ---------->DOF2                                                                            ----------->GT1                                                                           --------->DAG2<---------ARR14(2)          <----------ID1       --------->TOE1(3)                           <---------TOE2(3)    -----        ---------->DOF2        <---------MYB59            ----------->GT1  <---------TOE1(3) --------   ------>ZmHOX2a(1)           --------->TOE2(3)     <---------DAG2  <---------------AGL15<---------ATHB12 -----GLK1(2)           ------>ZmHOX2a(1)    <---------YAB1        <-----------HVH21     --------->ARR14(2)   atctcctatagaaagacaaacctgtcctcataacctaaaccaaaattttcattcaccttagggtgaatatgtcatataaggtaataaagccaatcttgta  4331600                               --------->AHL20(1)                               <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL20(1)                            <--------HAHB4              <---------ARR11(3)                            --------->YAB1              --------->ARR11(3)                   <---------YAB1                      <---------GLK1(1)                 --------->CCA1(2)                     --------->GLK1(1)                --------->ARR11(1)  <-----------GT1   <---------ARR11(3)                            < ---->YAB1 --------->YAB1  <---------YAB1  <---------ATHB12      <---------AHL20(2)               --- --->GT1  <---------YAB1   <---------AHL20(2)         --------->ARR11(3)                  -----------   ataacatatagaattatagatatgattctataattaattaacccaaacaataagtagatatctatattaaaaatcaaatcaaatctagtaatcggaaaaa  4331700                   --------->ANAC46           <----------DOF2    <------------AtMYB77    --------->MYB46(3)    --------->DEAR3(2)    <---------HSFB2a(1)    --------->HSFB2a(1)         <------------CBF               *TSS     ------>ZmHOX2a(1)    --------->HSFC1(2)        <---------AHL20(2)             <----------DOF2    <---------HSFC1(2)       <---------AHL20(2)            --------->LBD16   ------->TEIL    --------->ANAC58                        --------->At4g35610  --------->MYB52(1)<---------ATHB12                   --------->ARR14(2)                        <--- ---------MYB52(2) --------->ANAC58                    <---------ARR14(2)                        <--- ------>MYB52(1) <---------ALFIN1       <---------ANAC46   <---------At4g35610                <------ >GT1--------->DEAR3(1)   ----------->GT1        ----------->GT1   ------>ZmHOX2a(1)      <----------   aaacgaaccgtccctttctccactcaagtagttaaattggttctgtgaaggaagataaatccgctgttcctctcctctctctctctcttcccgttttcac  4331800                         <-----------HVH21                        --------->ANAC46                    <---------ARR14(2)                    --------->ARR14(2)                 --------->SPL7                <------NtERF2                ------>NtERF2                --------->ATERF1(1)               ------>NtERF2               <---------RAP2.3(1)               <---------SPL7              <---------ATERF1(2)              <---------ANAC58              <---------ANAC58 --------->ANAC58              --------->ATERF1(2)             <---------CCA1(1)              <---------RAP2.6(2)             <---------RVE1(1)              <---------RAP2.3(2)            --------->ARR11(3)                         <---------YAB1              <---------DEAR3(1)             <---------ARR11(3)             <---------YAB1              <---------RAP2.3(3)            <---------AHL20(1)           --------->YAB1<---------AHL20(2) -------DOF2  <---------DREB2C(2)          <---------TOE2(3)       --------->TOE1(3)    --------->AHL20(2) ------DAG2  --------->RAP2.6(3)     <---------DAG2              ------->TEIL    --------->MYB59 -----GT1  <-----------RAV1(1) --------->ANAC58   <---------AHL20(2)      ----------->GT1--------->ATHB12 --------------ANAC81<------ZmHOX2a(2)<----------DOF2         <---------ATHB12 --------->ICU4<-------   ttttgttcgttctctggcggccgatcccgtcgctcgctaccttttaagatattttttttatctaatgaacctgaaattgtaattaggcatataattgggg  4331900                                --------->DAG2                                              <--------                     <---------HSFC1(1)                                                     <--------                     --------->HSFB2a(2)                                             <---------ALFIN1                     <---------HSFB2a(2)<--------ATHB1          <---------MYB59    ------>ZmHOX2a(1)    --------->At4g35610   ----------->GT1                  <---------ANAC58        ==================HOX2a_HOX2a --LBD16      <---------YAB1   ---------->DOF2             <---------ANAC58  <---------KAN4(2)------>ZmHOX2a(2)   attatttgctgaaattctcatttctagatcgaaaaaagcgaataattcgttttcatttgattcttgcctaatcttagggtatgtcctcccccttgatctg  4332000                                                                                                    <                          <---------TOE1(3)                                                         <                          <---------TOE2(3)       <---------ARR14(2)                               --                       <<<<<<<<<MYB98 <---------AHL20(2)         <----------DOF2                 <--- -AGP1          <---------YAB1        --------->AHL20(2)         <---------DAG2     <----------DOF2<- -ARR11(3)<---------TOE2(3)    ----------->GT1    --------->ARR14(2)              --------->At4g35610   tatagtttttttgatgttgtgatttgttagggtttgtgaattaattgtttcagattgggttttgctcctttttccatttttgtctgctttagtttatagg  4332100         <---------GLK1(2)         --------->ARR14(2)         <---------ARR14(2)       --------->LBD16      --------->HSFB2a(2)     <---------LBD16  <---------GLK1(1)                                          --------->ANAC55(2) ------MYB83                                                 <---------ANAC58 ------MYB46(1)                                 --------->ATHB12    ------>ZmHOX2a(1) ------->MYB59                      <----------DOF2          <---------ANAC58 ------MYB52(1)<-----------RAV1(1) <---------ANAC58          <---------ANAC55(2) --------AtMYB61                   <---------ANAC58          <---------ANAC55(1)               ------   ttaggtttccggattttgtgttggagtttctaattttgctttgaattggattattagcccattacgtttcctaggcatagacattgatcaattgcacggt  4332200                               ------>ZmHOX2a(1)                          <---------ALFIN1                              --------->TOE2(3)                          <------NtERF2         <---------DAG2       --------->TOE1(3)             --------->ZAT18                         <         <----------DOF2  <---------GLK1(1)       <---------YAB1        ------>NtERF2               <      <-----------GT1     --------->GLK1(1)  <---------ICU4 <---------ZAT18                       ---     <-----------GT1   <---------YAB1   --------->ZAT14     <---------ZAT14                    <----- --->At5g28300  <---------At4g35610     <---------ZAT14     --------->ZAT14               <---------REM1(1)   gaatgttttaactttttaagctgttttgatttccttaaactgttcactgattactatttatgtgcagtttatgcccccatttttgagtagggatgtagaa  4332300  Previous    Next  AGI:  At3g13340.1    Description:  WD-40 repeat family protein. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G56190.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G55680.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G56190.2); similar to Os02g0721600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047961.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66839.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 4331763    to: 4335080    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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