Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->MYB52(1)                                                                      ------>MYB83  --------->ANAC58                                                                      ------>MYB46(1)                                                                    <---------MYB59 --------->ANAC58                       <---------ICU4                               <---------MYB46(2)                       --------->ATHB12                             <---------MYB111(1)               ----------->GT1             <---------AtLEC2       ------->TEIL      --------->ANAC46       <---------ARR14(2)     --------->ZAT6                --------->GLK1(2)       --------->AtLEC2       --------->TCP20--------->ICU4 <---------ZAT14      <---------AHL20(2)       <---------LBD16   taaccagtggaaccagtctgtaaaatgatttcagactactagactgcatggtttaagtataaaatctgaacctaactacaattttcacgcaaattccaac  4329700                                                <---------At4g35610                                                <---------ZAT2                                   --------->ANAC58                                   --------->ANAC46                                   --------->ANAC58                            --------->HSFB2a(2) --------->ZAT2                         ------->TEIL--------->ANAC46                      <---------ANAC55(2)      ----------->RAV1(1)                    <---------At4g35610                ------>ZmHOX2a(1)<---------ALFIN1        <-----------GT1              --------->At4g35610        --------->ZAT6--------->ANAC55(2)    --------->LBD16                   <---------ZAT14   tgtttattgaactctatcctagtcatgtatcgcgaacacccaaaacccccagcagtttatttcgatatactgactcgattgtaaactgagctaatcgtct  4329800                                                                                                    -                                                                --------->AHL20(2)               <---                                                             --------->AHL20(2)                  ====             ------>ZmHOX2a(1)                              --------->AHL20(2)         --------->YAB1     --------->YAB1                 --------->At4g35610 --------->AHL20(2)            <---------ATHB12    <-------TEIL               --------->YAB1       ----------->GT1                 --------->WOX13(1)   ctcaaattcatcatcctcgtctacaaatcccaataagaagcagccaattcgaacgagaaaaaataaaaaaatcaacgaggtttatgcaatcaaaatcgag  4329900                                                                                            <-------MYC3                                                                                            <-------MYC2                                                                                            ------->MYC3                                                                                           --------->ANAC58                                                                                         <---------ALFIN1                                                                                      <---------TGA1a                                                                 --------->ABI4(2)    --------->bZIP60(1)                                                              <------MYB46(1)         --------->ANAC46                                                              <---------DEAR3(2)      --------->TGA1a                                                             <---------DEAR4(1)       --------->ANAC58                     <-------TEIL                            <---------DREB2C(2)      <---------O2                    <------ZmHOX2a(2)                        --------->MYB111(1)      --------->ANAC58                   --------->AGP1                            <---------MYB46(3)       ===============                   --------->ARR11(3)                        --------->MYB55(2)       --------->O2                   <---------ARR11(3)                        --------->MYB46(2)  --------->At4g35610                   <---------ARR14(2)          <---------LBD16<---------ORA47(2) <---------At4g35610                   --------->ARR14(2)        --------->GLK1(2)<------MYB83   --------->ANAC58       <                  --------->GLK1(1)----------->GT1          <--------P       --------->ANAC46 -------            <---------DOF5.7(2)    <---------ANAC46         ====================================MYC_MYB            --------->MYB52(1)     <---------ANAC58        <-----------HVH21 --------->ANAC58--------          --------->DOF5.7(2)     <-----------------------TaNAC69(2)      ----------->HVH21--------->ANAC58 ---------->HVH21 <---------GLK1(1)<---------ANAC58 <------ZmHOX2a(2)   <----------DOF2 <---------REM1(2) ---ZmHOX2a(1) ------->GAMYB    --------->ALFIN1   <---------ARR11(3)   ========================bZIP_DOF ==========================HOX2a_HOX2a      <---------GLK1(2)<---------DEAR3(1) ------->TEIL------->MYC2   gactcacagttcgataacggagatccatttaagagtggcgtaaacagactctggatcatcgggtcggtgcaactctttgacgcatctcacgacacgcgcg  4330000                                        <------NtERF2                                        --------->At5g28300                                       <---------DEAR3(2)                                       <---------MYB46(3)                                      <---------DEAR3(1)                                      <---------ANAC46                                     --------->ATERF1(1)                                     <---------ABI4(1)                                     <------NtERF2                                    <---------DEAR4(2)                                    <---------RRTF1(1)                                    <---------RAP2.3(1)                                    <---------ERF1                                    <---------ORA47(2)                                    <---------ATERF1(1)                                    ------>NtERF2                                   --------->ALFIN1                                   <---------RRTF1(2)                                   <---------RRTF1(3)                                   <---------DREB2C(2)                                   <---------RAP2.3(3)                                   <---------DEAR3(1)                                   <---------ATERF1(2)                                   --------->ATERF1(2)                                   <---------RAP2.3(2)                                 --------->ANAC46            <-------TEIL                           --------->LBD16                <---------At4g35610     <----------DOF2       <---------At4g35610   --------->YAB1 ===============bZIP_DOF   --------->At4g35610   --------->ATHB12 ------ZmHOX2a(1)         --------->ANAC46      <---------ATHB12                                 ---- -->LBD16               ------>ZmHOX2a(1)   --------->MYB46(3) ------->TEIL                ---------- ->ANAC46   ------>ZmHOX2a(1)  <-----------RAV1(2)        --------->At4g35610         <----------DOF2   aaggactctttctccttcttcgtctcctccgctacaggcggcggtaaccattcattgtacagatgcatcgcttcttctcagtctccgtctttcgtcgtct  4330100                                                              <---------DAG2                                                              <----------DOF2                                                             <---------ANAC58                                                       <---------ANAC58                                                       <---------ANAC58                            --                                                       <---------ANAC46                            --                <---------REM1(1)                     <-------TEIL                                 --            <---------WOX13(1)                     --------->At4g35610                         ------   <---------AHL20(2)                              --------->ZAT2                              ------  --------->AHL20(2)                        <-----------TBP  <---------ANAC58                  ------ -------->CBF  <---------TOE2(3)      --------->At4g35610<---------MYB52(1)                    ------ >ID1      <------------CBF ------>ZmHOX2a(1)      <---------At4g35610                   <----------DOF2   tcaattttatgcagattgatgtagtctctcctctctcagacgctgaatttataagctgcgtttgctttttcagtttattttctcttgttttctttccaag  4330200                                                                                   <----------DOF2                                                                        <------------CBF                                                                       --------->ATHB12                                                                       <---------ICU4                                                                       -------->ATHB1                                                                       --------->ATHB51     <--------          <---------ARR14(2)                                          <---------ATHB51     ----------          --------->ARR14(2)                                          <---------AHL20(2)   --------->WRKY45         <---------CCA1(2)                                            <---------YAB1       --------->WRKY38(1)         <---------GLK1(1)                                            --------->AHL20(1)   --------->WRKY12       --------->YAB1                                                 --------->ICU4      <---------MYB52(1) ------->ANAC58         ------------>CBF                           --------->AHL20(2)     --------->DOF5.7(2) --------->GT1         <------ZmHOX2a(1)                           --------->AHL20(1)    <-------GAMYB ------->ANAC58       <----------ID1                               <---------AHL20(2) <---------At5g28300 --->ANAC46        ---------->DOF2                                --------->AHL20(2) <-----------GT1 --->AtLEC2      <------ZmHOX2a(1)                          <------ZmHOX2a(1)      <---------DAG2 --->ANAC58   --------->LBD16  ------->TEIL                ----------->GT1      <-----------GT1     - --->ANAC58   <---------LBD16--------->YAB1               <---------TOE2(3)  <------------CBF       -   caagaaaaatcatatccgaggaaaaggacaatgaacataccatagaaatgaaaacaacttgaggaaaaaaaaattattgtattgactttaccgttgactg  4330300                 <-----------RAV1(2)                 <---------MYB55(1)                <------NtERF2             <---------At4g35610             --------->At4g35610      --------->DEAR3(2)      --------->MYB52(1)  <---------ALFIN1   --------->ANAC46    --------->REM1(1)   --------->LBD16 <------MYB46(1)  --------->ARR14(2)  --------->ATERF1(2)  --------->ANAC58             --------->GLK1(1)                       <--------  <---------ATERF1(2)  --------->ANAC58  ------>MYB83                               <-----------GT1 -WRKY18(1) <---------ATERF1(1) ----------------->AG<---------GLK1(1)             --------->YAB1 ->HVH21 ------->GAMYB<-------TEIL  <---------ARR14(2)                           <---------YAB1------ -------->MYB52(1) <------MYB83--------->MYB52(1) <------ZmHOX2a(1)<---------MYB52(1)      <--------- ------->P  --------->ALFIN1   -------->P------>MYB46(1)     <-----------GT1   --------->YAB1  ------   gctaccggcaacgggagcggcaggtacaccacttaccgaaaccgactaaataggatttcaaattagccccttaagttttacttataatacaatttaccct  4330400                                                                --------->AHL20(2)                                                               <---------ATHB12                                                         ------>NtERF2                       --------                                                         --------->LBD16                   <---------ANAC46                                                        <---------RAP2.6(2)              --------->SPL1(2)                                                --------->ANAC55(1) ----------->GT1      --------->SPL7                                                --------->ANAC58<---------AHL20(1)      <---------SPL1(1)        <---------ANAC58                        --------->ANAC46<---------AHL20(2)      --------->SPL1(1)        <---------ANAC58                        --------->ANAC58--------->AHL20(1)     <---------SPL7 -At5g28300                                <---------ZAT18------>NtERF2                <---------SPL1(2) --->TOE1(3)                               <---------ETT(2)    --------->AHL20(2)   <---------------- --GT1  <---------ANAC46         --------->ANAC58      <---------LBD16             ------------------ --->TOE2(3)   <----------DOF2   --------->ANAC58      --------->RAP2.6(3)        ----------->HVH21   taaacatttgacttgtgctatattgtttagatggaacgcatactgtccacaagtaattccggccaataaattgtgaatttaagtctgaccgtacggtgga  4330500                                                                                              <------                                                                                           ----------                                                                                     <---------ARR14(2)                                                                                     ------->TEIL                                                                                     --------->ARR14(2)                                                                                  <---------ANAC46                                                                                  <---------ANAC55(2)                                                                                 <-------TEIL <------                                                                                 <---------TOE1(2)                                                                                 ------->TEIL <------                                                                                 <---------TOE2(2)                                                                               --------->TOE2(2)                                                                               <---------SPL7--------                                                  --------->At4g35610         <---------ANAC58-------     --------->ANAC46                             <---------At4g35610         --------->ANAC55(2)     --------->ANAC58                       ---------->DOF2                   <---------ANAC58-------     --------->ANAC58           <-----------RAV1(2)                           <---------ANAC55(2) ->ALFIN1        <---------RVE1(1)   ----------->GT1                          <---------ANAC46------- --SPL14         <---------CCA1(1)  --------->ALFIN1  <---------YAB1         --------------->AtSPL3 >SPL14       ----------->GT1--------->ETT(2)  <---------At4g35610      <-----------GT1  --------->YAB1   gacacatacgcatagatggatatttttgttgtcaacaggtggaaatttaagcagctattatttgttcatcgaattaacttacgtacgtatatgatgacga  4330600  Previous    Next  AGI:  At3g13330.1    Description:  binding. similar to proteasome activator subunit 4-like [Oryza sativa (japonica cultivar-group)] (GB:BAD53980.1); similar to hypothetical protein OsI_021869 [Oryza sativa (indica cultivar-group)] (GB:EAZ00637.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45201.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 4319654    to: 4330068    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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