Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                <---------YAB1                                                                             --------->ICU4                                                            --------->AHL20(2)-------->ATHB1                             --------->AHL20(2)             <---------AHL20(2)<---------ICU4                    --------->ATHB12                       <---------AHL20(2)<---------AHL20(2)                    <---------ICU4               <---------AHL20(2)          --------->AHL20(1)                   --------->ICU4               <---------AHL20(2)           --------->AHL20(2)                   <---------YAB1               <---------AHL20(1)     --------->At5g28300                 --------->YAB1                 --------->AHL20(2)    ----------->GT1    <-----------  --------->ZAT6<---------YAB1     --------->ANAC46        --------->AHL20(2)<---------YAB1   tataagactataagttttgtgataattgcaaaaatatactcaatctacaattaatttttaaaaaaattttaggggtaaaattattaaaaaatgagtaaac  4314100                                                                                      --------->DAG2                                                                                      <---------TOE2(3)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                --------->AHL20(2)                                                ----------->GT1                 <---------ATHB12                 ----------->GT1               --------->DAG2                ------>ZmHOX2a(1)                ----------->GT1               ---------->DOF2              --------->YAB1                <---------ZAT6    <---------ANAC58                    <---------AHL20(1)     --------->ZAT6               <---------ANAC58                    --------->AHL20(2)            - ------------TaNAC69(2)   --------->TOE2(3)--------->TOE2(3)          --------->AHL20(1) --------->ALFIN1   aagttcaacactgaataagtgttaaaaacattatttgcttcgataccataaagtttaaacccaaattcagaatataatcctaataaataaggtgtatgca  4314200              <---------ARR14(2)              --------->ARR14(2)           <---------ANAC46         <---------MYB46(3)        <---------AtMYB61        <---------ZAT6        --------->ALFIN1              ---------->DOF2 --------->DAG2                  --------->ATHB12     <-----------GT1 --------->DOF2         ----------->RAV1(1)          --------->YAB1                      ----------->GT1   taaaaagctagtggtggaaactcgagcaccagtctcgattgaaagttgagaagaattatcaactcatggagcatcacaaatagccaattggtcgtaacat  4314300                     <-----------GT1                    --------->AHL20(2)                    <---------AHL20(2)                  <---------ATHB51               <----------DOF2                --------->ICU4                          <---------AHL20(2)             <---------DAG2           --------->ANAC46                             <---------ATHB12            <-----------GT1           --------->ANAC58                             --------->AHL20(2)       <---------YAB1           --------->ANAC55(1)              --------->ATHB12                    --------->AHL20(2)           --------->ANAC58                --------->ICU4                <-----------GT1   agatagtggctacaagtaatatttaactactgaatcgaatttgtagtgatttgttcaaataattcgaaacctattgtaccatttttatacttttttgtaa  4314400                                                <---------AHL20(1)                                                --------->AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(1)                                             --------->AHL20(2)                                             --------->AHL20(1)                                             <---------AHL20(2)                  <---------AHL20(2)        --------->AHL20(2)                 --------->AHL20(2)         <---------AHL20(2)                 <---------AHL20(2)   <-------GAMYB                      <------ZmHOX2a(1)              ------>MYB83           <---------MYB46(3)         --------------->AGL15              ------>MYB46(1)        <------MYB46(1)      <---------ARR11(3)            <---------MYB59      <---------MYB46(3)       <---------AHL20(1)---------->DOF2     ---------->DOF2          <-----------RAV1(1) <------------CBF      <----------ID1     <---------ANAC58  --------->At4g35610 --------->YAB1 ----------->GT1 ------------>CBF  --------->MYB59     <---------ANAC58  <---------At4g35610 ----------->GT1<------MYB83--------->ATHB12    --------->ICU4     <---------GLK1(1)   catcagctaaagtaccaaattaaatgataaaaatgttgttggttaaataatttattgcaatatatactgaaattaggacaaagaggctagatttcttgag  4314500                                          ----------->GT1                                         <------NtERF2                                         --------->RAP2.3(1)                                        --------->ABI4(2)                                        ------>NtERF2                                        <---------RAP2.3(1)                                       <---------DEAR3(1)                                       --------->DEAR3(1)                                      --------->RAP2.3(1)                                      --------->ATERF1(1)                                      <---------ABI4(2)                                     <---------DEAR4(2)                                     <---------RAP2.3(1)                  <---------ANAC46   <---------ATERF1(1)            --------->ARR14(2)      *TSS<---------ATERF1(1)         --------->LBD16       ----------->HVH21   <---------ANAC46        <---------ANAC46     ----------->GT1       <---------ANAC58                                 <        <---------LBD16      --------->ALFIN1      <---------ANAC58                                <-       <---------LBD16       <---------ANAC46 --------->MYB52(2)                            ---------    ---------->DOF2        <---------ANAC46 <---------MYB52(1)                            ---------->DOF2  <---------AHL20(2)       <---------ANAC58<-------GAMYB                              ---------->DOF2  --------->AHL20(2)       <---------ANAC58--------->At5g28300                    ---------->DOF2  --   ggaaataaatgcgggaactgtcgtaaatggggtgtgaaacggcgccgttatttgggtgtctccatgtcttcttccacattctaagaaagaaagaaagaaa  4314600                                                                                          <---------LBD16        --------->AHL20(2)                                                                --------->LBD16        <---------AHL20(2)                                                               --------->TOE1(2)       <---------AHL20(1)                                                                <---------LBD16       --------->AHL20(1)                                                              --------->CCA1(2)       --------->AHL20(2)                                                              <------ZmHOX2a(2)    --------->AHL20(1)                                   ------>ZmHOX2a(1)            --------->AGP1    --------->AHL20(2)                             --------->HSFC1(2)                 --------->ARR11(3)    <---------AHL20(2)                             <---------HSFB2a(1)                <---------ARR14(2)   --------->AHL20(2)                              --------->HSFB2a(1)                --------->ARR14(2)   <---------AHL20(2)                              <---------HSFC1(2)          --------->GLK1(2) ---------AHL20(2)                             --------->ANAC58         --------->At4g35610 --------AHL20(2)  --------->At4g35610   ------->GAMYB   =====================================HOX2a_HOX2a -->GT1<---------AHL20(2)     --------->TOE2(3)--------->ANAC58         <---------At4g35610    ------ ------->AHL20(2)  <---------At4g35610  --------->MYB46(3)           <----------DOF2 --------->GLK1(1)   attaaataatttattttcatcaactgatgaaacatcaattcaaccaagaacgaaacttcctctcgctcgcgctctactgacaatctgagatccagggatt  4314700                                                                                         >>>>>>>>>TBF1                                                         --------->YAB1              --------->At4g35610       =========================HOX2a_HOX2a             <---------YAB1            <------ZmHOX2a(2)       --------->ZAT14                                <---------ICU4             <---------ARR14(2)       <------ZmHOX2a(2)                              --------->YAB1             --------->ARR14(2)      <---------ARR11(3)                           --------->YAB1            --------->At4g35610     <---------At4g35610                          <-------TEIL               <---------At4g35610   <---------HSFB2a(2)        <---------ARR14(2)<---------ARR14(2)           <---------ZAT2 ---------   --------->HSFB2a(2)        --------->ARR14(2)--------->ARR14(2)          ----------->RAV1(1) --->GLK1(2)             ------>ZmHOX2a(1) --------->MYB52(1)      <-------GAMYB--------->At4g35610   ctattccagatcactctcaattctctcctccatatactatcgagcaaacggattcatcatcatactctgcgttgtctccagcagatcagaagaagaataa  4314800                                                   --------->ATHB12                                                <---------ANAC58                                                <---------ANAC58                                           <---------ARR14(2)                                           --------->ARR14(2)                        <---------MYB52(1) <---------MYB52(1)                 ---------->DOF2          <-------GAMYB                --------->YAB1    --------------->AGL15               <---------ATHB12   <---------------AGL15             --------->WOX13(1)  <-----------------AG   <------MYB83                                -          --------->TOE2(3)      <-----------------AGL1 <------MYB46(1)                   ----------- >YAB1    --------->TOE1(3)   <----------DOF2 <---------YAB1     ------>ZmHOX2a(1) <<<<<<<<<TBF1    <   gtagagaagaaacctcaatcaaagtcgttgttctttcttatttcggttatgcttgatttggtttctcctacttgttcaccaattcttcttctctgaccct  4314900              --------->DAG2             ---------->DOF2  <---------WRKY18(1) --------->WRKY12 --------->WRKY38(1)              ---------->ID1                                        <----------DOF2 --------->WRKY45            <----------DOF2                                        <---------CCA1(2) -------->DOF5.7(2) <---------ANAC58              --------->TOE2(3)          <---------ICU4 >HVH21   ----------->GT1<----------DOF2          --------->TOE1(3)         --------->ICU4 ---------MYB52(1)  <---------ANAC58 <----------DOF2 ---------->DOF2        <---------ATHB12    <----   tcgttgactgcaaggtaaagttgccttctttcttttgcccttttgttcttaacctcaaagtctcgattttgttgtgaaatcattccatctctttccgatt  4315000  Previous    Next  AGI:  At3g13320.1    Description:  CAX2 (CATION EXCHANGER 2); calcium:hydrogen antiporter. Identical to Vacuolar cation/proton exchanger 2 (CAX2) [Arabidopsis Thaliana] (GB:Q39254;GB:Q944Q1;GB:Q9LTT6); similar to ATCAX6 (calcium exchanger 6), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT1G55720.1); similar to ATCAX5 (calcium exchanger 5), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT1G55730.1); similar to ATCAX5 (calcium exchanger 5), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT1G55730.2); similar to low affinity calcium transporter CAX2 [Arabidopsis halleri subsp. halleri] (GB:CAE30484.1); contains InterPro domain Calcium/proton exchanger su Range:  from: 4314536    to: 4318358    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version