Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                            ---------        --------->ZAT18                                                                    <---------GLK1(2)        <-------TEIL                                                                       <---------ARR14(2)        --------->ZAT14                                                                    --------->ARR14(2)        <---------ZAT14                                                                   --------->HSFB2a(1)      <-------PIF5                                                                      <------NtERF2      ------->MYC2                                                                     --------->LBD16      <-------MYC4                                                                     ------>NtERF2      ------->MYC4                                                                     <------NtERF2      ------->PIF5                                                                     <---------At4g35610      ------->MYC3                                                                    --------->DEAR3(1)      <-------PIF4   --------->GLK1(2)                                               <------NtERF2      ------->PIF4   <---------ARR14(2)                                              --------->ATERF1(1)      <-------MYC3   --------->ARR14(2)                                              <---------LBD16      <-------MYC2  <---------GLK1(1)                                                --------->RAP2.3(1)     <---------ANAC55(2)                                                            <---------RAP2.3(1)    <-----------------------TaNAC69(2)                                              ------>NtERF2    ------------>OsbHLH66      ----------->RAV1(1)                                  <---------ATERF1(1)   <------------OsbHLH66      --------->ANAC46                                     <---------DEAR3(1) ----->ANAC58   --------->ANAC58                     <---------GLK1(2)           <-----------HVH21 ----->ANAC58   --------->AtLEC2                 <---------At4g35610    --------------------->WRI1 ---->AGL15     --------->ANAC58 <---------ALFIN1------>ZmHOX2a(1)      ------>ZmHOX2a(1) <----------TaMYB80 -----AGL15--------->ANAC46<---------ETT(2)<<<<<<<<<TBF1       <<<<<<<<<TBF1    <-----------RAV1(1)   agcaaacacgtgcacagcatgcaaatccgtccacaacacatcttcttcttcctctgattctcttcttcttcgtcctctgtttttgtcgccgcagattccg  4289700                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                <------MYB46(1)                                                                <------MYB83                                                                <---------MYB46(3)   --------->REM1(2)                                                             <-------GAMYB<------NtERF2                                                            <-----------RAV1(1)     --------->ALFIN1                        --------->At4g35610                 --------->MYB52(2)     <-------MYC3                        <---------At4g35610                 --------->MYB55(2)     ------->MYC3              <---------TOE2(3)                             --------->MYB111(2)   <---------ANAC46 ---->LBD16   <---------TOE1(3)                             <---------MYB46(3)    <---------O2 >GLK1(2)     --------->MYB59                      <----------DOF2   <-----------RAV1(1)            -   agatttgtccacgatttaggttgaacagctctctaatatagagagagagaccgcgtttttgtttgttggttttgttggcgagaaacgtggagagagatag  4289800                                                                                          <----------DOF2                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                   <---------YAB1--------->ALFIN1        <---------ANAC58                                         ---------->DOF2       --------->ALFIN1      <---------ANAC58                       --------->ZAT2 --------->CCA1(2)    <---------ANAC46 --------->ANAC58                       <---------ZAT2<---------ARR11(3)    <---------ANAC58 <---------ANAC46 <------ZmHOX2a(1)     <---------At4g35610       *TSS<------------CBF    <---------MYB52(1) ----------->GT1       --------->At4g35610 <---------TOE2(3) --------->ALFIN1        <---------ANAC58 ---------->GT1     ---------->DOF2  --------->ARR11(3)    <---------ANAC58 --------->ANAC58  -------   agaggataaatttagtgggagagaaagctgagagagagagatataaaggaattgtgattgtgcgtgtgtgtggacgttacgcctatttcttgcttttaaa  4289900                            --------->ANAC46                           ------->GAMYB                          <---------MYB52(2)                    <---------AHL20(2)                        ----------->RAV1(1)                     --------->ATHB12                      ------->GAMYB                     >>>>>>>>>>WRKY11                     --------->ANAC58                   >>>>>>>>>>WRKY6                     --------->ANAC46                  --------->WRKY12                --------->YAB1 --------->MYB52(1)      --------->WRKY38(1)       --------->AHL20(2) --------->MYB46(3)     ------>ZmHOX2a(1)   --------->YAB1    --------->ANAC58           --------->TOE2(3)                                   -  <---------ATHB12 --------->MYB52(1)    ------>ZmHOX2a(1)     --------->AHL20(2)                  <- --->DOF2       --------->ANAC46  ------->GAMYB --------->TOE1(3)                         <----------DOF2   gctaatcaaaaaaatcaaacacaacgcaacaaacaacggtctccttatttccttaagttgacctatttattgggcctaaggcccattaatgtctttccat  4290000                            <---------MYB46(3)                         <---------MYB46(3)                        <---------AtMYB61                        --------->ALFIN1                      <---------MYB46(3)                     <---------DEAR3(1)                     <---------AtMYB61                     --------->ALFIN1                   <---------MYB46(3)                   --------->MYB55(2)                  <---------DEAR3(1)                  --------->ALFIN1                  <---------AtMYB61                 <---------ABI4(1)                                                          ---------                 <------NtERF2                                                              <--------                <---------DEAR4(2)    ------------>CBF                                     --------->LBD16               --------->ALFIN1  <---------YAB1                                          *TSS<-------           ---------->DOF2 <---------AtMYB61                                             <---------LBD16        <----------DOF2 <---------DEAR3(1)                                      <----------DOF2<-----  <----------DOF2<-------GAMYB --------->YAB1                                <-----------GT1<-------- --------->ID1 <---------DREB2C(2)<---------ICU4                            <<<<<<<<<<GT-3b<---------ATERF1(1) ----------GT1 <---------DEAR3(1)--------->ICU4   <-------TEIL          <---------AHL20(2) ------>NtERF2   ttttctttttctttaaggcggtggtggtggtggtcataattccaattctatatacatatgtttagcgattttgtttatttttcttttcaactccggctgc  4290100                                      <---------MYB46(3)                                    <---------GLK1(2)                                    --------->ARR14(2)                                  --------->LBD16                                <------NtERF2                                --------->ATERF1(1)                                --------->RAP2.3(1)                                <---------LBD16                               ------>NtERF2                                                ---------                              --------->ATERF1(2)                                          --------->TOE1(3)                              <---------ATERF1(2)                                          --------->TOE2(3)                              --------->ANAC46                                             <-------GAMYB                             --------->ATERF1(1)                                          ------>ZmHOX2a(2)                             --------->ERF1----------------->AGL1 <----------DOF2    <--------P     <---------TOE2(3)       --------->MYB46(3)        <------MYB46(1)              <-------GAMYB     <---------TOE1(3)       --------->DEAR3(2)        <------MYB83               <---------TOE2(3) >ZAT2                       --------->RAP2.3(1)      --------->MYB111(1)     <----------DOF2 -ZAT2----------->GT1       <---------ATERF1(1)       --------->MYB46(2)  <-----------------AGL1    - --DEAR3(1)     <---------DAG2--------->DEAR3(1)      --------->MYB59     <-----------------AGL2----- -NtERF2        <----------DOF2<---------ATERF1(1)    <---------AtMYB61   <-----------------AG<------ -At4g35610 <-----------GT1 <---------At4g35610      <--------P   <---------DAG2  <---------TOE1(3) -   gatttttagggttatttcctttttgtatgtagccgccggattgttggcaatttgggtaggtttcttcacttttgtttccgatttagggttgatcgttaac  4290200                                                                                               ------                                                                                             <-------                                                                                             --------                                                                                          <---------HSFB2a(2)                            <---------ARR14(2)            ---------->DOF2                 --------->HSFB2a(2)                            --------->ARR14(2)         --------->LBD16               <------MYB83  ---------->DOF2  --------->YAB1                     <---------HSFB2a(2)            <------MYB46(1) >DOF5.7(2)        <---------ICU4                     --------->HSFB2a(2)        --------->ARR14(2) -------->AHL20(2)--------->ICU4                     <---------LBD16             <---------ARR14(2) ---->ZAT6        <---------ATHB12                <---------ZAT2            ------->TEIL  ------>ZmHOX2a(1) ---DOF5.7(2)   --------->WOX13(1)                --------->ZAT2    <---------MYB46(3)   <---------LBD16 -------->YAB1<---------ZAT18                   <---------DEAR3(1) --------->ALFIN1 --------->MYB59   aataaaaagtttgtggtgcaatcatgtccaaatcggtgtattcaaatgcctcggctcgggaaaagaatggtggtgatgcatccgatttggtcctggatcg  4290300                                                           --------->LBD16                                                          <---------ANAC46                                                 -------->HAHB4                                                 <--------ATHB1                                                 <---------ICU4                               <------                                                 --------->ATHB12                             -------                                                 --------->ATHB51                            --------                                                <---------YAB1                               --------                       <---------MYB52(1)       <---------ATHB51                             --------                      --------->LBD16           --------->ICU4                               <-------                    <---------LBD16           --------->YAB1                                 --------                  <---------SPL7           <---------ANAC55(2)                               <-------       ------->TEIL <---------ANAC46       --------->ANAC55(2)          --------->AHL20(2)   --------       <---------ARR14(2)                 <-------TEIL    --------->ANAC55(2)                --------       --------->ARR14(2)             --------------->AtSPL8            <---------AHL20(2)  <-------- >ZmHOX2a(2)      <-----------HVH21   <---------TOE2(3)   <---------ANAC55(2)               --------- --ARR14(2)      ----------->HVH21    <---------------AtSPL8     <-----------GT1<----------DOF2 ->ARR14(2)   <---------DEAR3(1)      <---------YAB1   --------->PCF5  --------->AHL20(2)   <--------   tctaatacgaatcccctcggtgtccggtaagagaatagttatggtacataataattggtcccgtatttttcaatttaaatgcctttgttagaaaacccta  4290400   ---------->DOF2 ---------AGL15 -------->AGL15         <---------AtLEC2 ->TOE1(3)             <-------TEIL --------->AG       <---------ANAC58             <---------GLK1(2) ->TOE2(3) ---------->DOF2   --------->CCA1(2)   <---------ARR11(3) --------AGL15      <---------ANAC58             --------->ARR11(3) ------->AGL15      <---------ANAC46           <---------TOE1(2) ----------AG      <---------AtMYB61           <---------TOE2(2) --------->AGL1    --------->ALFIN1           ------>ZmHOX2a(1)                     ------>ZmHOX2a(2) --------->AGL2   --------->ZAT14         <-----------HVH21                        <------ZmHOX2a(2) ---------AG      --------->ZAT18        --------->LBD16                    <-----------GT1<---------AHL20(2) -------->AGL2    <---------ZAT14      <---------LBD16            <---------ANAC58--------->ARR14(2) ---------AGL1   --------->ALFIN1    --------->PCF5               <---------ANAC58<---------ARR14(2)<   attgggaaagaccgaaagagtgtggtgcatgatacgatggtcccggtcctagatttttcgaaaaattgccttggttataaaccagatcggttttaaaatg  4290500                                    <-------TEIL                                   <---------ANAC46                                 <---------MYB46(3)                                --------->ALFIN1                                <---------DEAR3(1)                                <---------AtMYB61    <----------DOF2                              <---------MYB46(3)     <---------DAG2       <-------GAMYB         <---------AtMYB61      <---------DAG2  <---------ZAT2             --------->ALFIN1    ---------->ID1  --------->ZAT2          <---------AtMYB61--------->DAG2                                 ---------->DOF2 ---------DEAR3(1)   ----------->ARR10    ---------->DOF2                            <----------DOF2<   cctcggctcggttatagatggggaagaattggtggtggtgcataaaaagttgtcccttttctattcaaatgcctcggttcaaaaaccctttctaaagctt  4290600  Previous    Next  AGI:  At3g13275.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO45215.1) Range:  from: 4289201    to: 4289849    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g13277.1    Description:  other RNA Range:  from: 4290089    to: 4291602    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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