Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->YAB1                                                                    --------->MYB46(3)    --------->ANAC55(2)                                                                  --------->WOX13(1)   <------ZmHOX2a(2)                                                         =====================================HOX2a_HOX2a          <-------TEIL                                   <------ZmHOX2a(1)            <---------ARR11(3)  --------->GLK1(2)                                     <---------YAB1                --------->ARR11(3) <---------GLK1(2)                                     <---------TOE2(2)    ---------->DOF2 <---------ARR11(3)            --------->ANAC46        <---------TOE2(3)  <---------YAB1  <---------ANAC55(2)   caagattctaggtacagagtgtctcttcgccctacacaatatcagaagtgaaacacttaggattaaaacaatcaccatgaaagtagaagatcacataaca  4266000                                                                  --------->AHL20(2)                                                                 <---------AHL20(2)                                                              <---------ICU4                                                             --------->ICU4                                                             <---------ATHB12                                                             <---------AHL20(2)                   --------->DAG2                            <---------ATHB51                  ---------->DOF2                            --------->AHL20(2) ----------->GT1           ----------->GT1                            ------->GAMYB <---------GLK1(2)          --------->YAB1                             --------->MYB46(3)     ---------->DOF2         <---------ATHB12                        ------>ZmHOX2a(1)<---------AHL20(2)                -       --------->WOX13(1)                       --------->TOE2(3)--------->AHL20(2)      <----------DOF2   aatacaaaacaatcagtaacaaaagtgaagaagatagccacttagaacttcctcaacagccaaataattaaattctctcaaagagataaaactttgaagc  4266100                               <---------ARR11(3)                               --------->ARR11(3)    --------->MYB52(1)                           ---                           --------->YAB1   ----------->GT1                                       <-- ---------->GT1           <---------ATHB12 >>>>>>>>>TBF1                                        <----   atatgtaaaattcaaatgtgacaatacaatgaagatttcaacgaagaagaaaaaaaaacagatttatgggattttagtttgatttcggcgattttgtatt  4266200                                  <---------ANAC55(2)                                  --------->ANAC55(2)                                  --------->ANAC58                                  --------->ANAC58                                  --------->ANAC46                       -------->P --------->ANAC55(1)                       --------->TOE2(3)              --------->AHL20(2) <---------LBD16                      ------->GAMYB ------>ANAC55(2)     --------->MYB52(1)                              --------->ANAC46 -------ANAC55(2)   <---------MYB52(2)        --------->ICU4       --------->MYB52(1)    --------->GLK1(1) -------GT1   --------->YAB1   <---------ARR14(2)             <---------ATHB12           <---------GLK1(1)   acgaattgaactaaaattataaactaaccatggaatacggaagaggcgatgatgttgaatgccaatcgctaaccgaaaccctagtttcagcatttcccaa  4266300                                                                              <-----------HVH21                                                                             <---------ANAC58                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                          --------->ZAT18                 <---------HSFB2a(2)                                      <---------ZAT18                 --------->HSFB2a(2)            --------->ATHB12       <---------ANAC58           <---------ARR11(3)                 <<<<<<<<<<<<<<<<<LFY     <---------ANAC58             -          <---------ZAT2               --------->MYB52(2)            *TSS--------->ALFIN1         <--          <---------At4g35610          <---------MYB46(3)      --------->At4g35610        <---------At4g35610          --------->ZAT2               ----------->GT1         <---------ZAT2<---------ANAC58     <-- <---------GLK1(1)                  ------------>MYB.PH3(2)    <---------At4g35610        --------->At4g35610   ttgaaatctcccagctcttctggtacaaaccctagataagtttgttacaaacattggaagtttgtagctgctagagtgcgcgtgagacatttagctgcta  4266400                                 ----------->GT1                                 <------NtERF2                                 <-------GAMYB                                ------>NtERF2                                <---------MYB46(3)                                --------->MYB55(2)                               <---------DEAR3(1)                               <---------ANAC58                              --------->ATERF1(1)                              ------>NtERF2                              <------NtERF2                              <---------LBD16                             <---------RAP2.3(1)                             <---------RRTF1(1)                            <---------ANAC58                            <---------RAP2.3(2)                            <---------DEAR3(1)                            <---------RAP2.6(2)                            <---------RRTF1(2)                            <---------RRTF1(3)            <----------DOF2 <---------RAP2.3(3)      ----------->HVH21     <---------ANAC46    <---------ANAC58        <---------ANAC58    <---------ANAC58       <---------LBD16  <---------ANAC58      <------------CBF  <---------ANAC58     --------->AtMYB61                            <---------YAB1  <---------ANAC46  --------->AtMYB61                           ----------->GT1 --------->ZAT18   --------->MYB46(3)                     <---------ICU4 <---------ZAT18  --------->TCP16(2)                      --------->YAB1 -------->ALFIN1 <---------PCF5<---------ANAC58          <---------------AGL15 -------ANAC58   <---------TCP16(1)       ----------->GT1<---------AHL20(2)                        <- -------ANAC58   --------->PCF2<---------ANAC46          <---------YAB1   <---------ANAC46         --   gagtgcgcgtgactctttgggaccaccattgcggcgggtgataagagtaattagagtttataattagagtaatattgtgtagattagaagaaaatttgta  4266500                                     <---------AHL20(2)                                 <---------AHL20(1)                                 --------->AHL20(1)        <---------MYB59                                 <---------AHL20(2)        <---------MYB46(2)                                 --------->AHL20(2)       --------->ANAC55(2)           <-----------GT1      --------->AHL20(2)        --------->ANAC46                       ----         <---------WOX13(1) --------->MYB46(3)          <-----------GT1                 --------->ARR14(2)   <-----------GT1         ------->TEIL      ----------->RAV1(1)       --------->MYB46(3)     <------ --------AHL20(2)       <---------MYB52(2)  --------->REM1(1)------>MYB83  ----------->HVH21------>ZmHOX2a(1) ------->AHL20(2)--------->YAB1 <---------ATHB12------->GAMYB------>MYB46(1)            <---------ARR14(2)   tttatttactgatttactctcatgaaacgaaccaataaatttatctacaacagaggtttcacctaattttctaactactgacctatatcaaatcctcttt  4266600                                                                                   ------->GAMYB                                                                                   --------->ANAC46                                                                                  --------->MYB46(3)                                                                    <-----------HVH21                                               --------->YAB1      ------->GAMYB <---------At5g28300                                             <-----------HVH21    --------->MYB46(3)                                            ------->GAMYB        <---------At5g28300<-----------HVH21 ------->GT1                             <-----------GT1        <-----------GT1 <-----------GT1     - ----DOF2                <---------ZAT6 <-----------GT1        <-----------GT1 <-----------GT1 ------   ggttatatgtgatcacttgtttttctagtggaaacaaaaattttaactgtcataaacaatggattttaaccgtcaaaaattttaaccgtcataaacacag  4266700                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  ---                                            --------->YAB1                                        <--                                       --------->YAB1                                             <--       <---------YAB1            --------->TOE2(3)                                               ----  ------------------------>ANAC81<----------DOF2                                       --------->ARR11(3) <---------AHL20(2)           --------->ARR11(3)                ----------->GT1        <---------ARR11(3) --------->AHL20(1)           --------->GLK1(2)                 <----------ID1        <---------GLK1(1) --------->AHL20(2)           <---------ARR11(3)         --------->TOE2(3)            --------->GLK1(1) -------->AHL20(2)           --------->CCA1(1)      <---------ARR14(2)                <---------CCA1(2) ----->GT1                   --------->RVE1(1)      --------->ARR14(2)  --------->AHL20(2)    -------   aaaaaaattatcagacaaaaacaaaaacaaaaaatctttaatcaaattatagtggattttcttaaaacgaaaaaaaaaatggaaactgatatctcaaaaa  4266800           --------->AHL20(2)          <---------ATHB51          --------->ICU4          --------->AHL20(2) ----->ZmHOX2a(2) -----ZmHOX2a(2)                      --------->AHL20(2)            --------->WOX13(1) ------->GLK1(1)                      <---------AHL20(2)           <---------AHL20(2) --------GLK1(1)          <----------DOF2                    ----------->GT1 ------>ARR11(3)      <---------CCA1(2)         ---------->DOF2    --------->AHL20(2)          <----- -------ARR11(3)     <---------MYB52(1)<---------AHL20(2)<---------AHL20(2)               ---------->DOF2 -------AGP1     <-----------GT1     --------->YAB1     <---------YAB1              ---------->DOF2 ----->RVE1(1)  <-----------GT1  <---------AHL20(2) <---------ARR11(3)        ---------->DOF2  ------ --->DOF2 <---------AHL20(2)   --------->ANAC55(2)  --------->ARR11(3) --------->YAB1--------->DAG2   gatctcttagaaataattttacccttatcttttatgtaattttaatttttaaaagataataaatggaaattaatcagattaaaagaaaaagtcaaagaaa  4266900  Previous    Next  AGI:  At3g13226.1    Description:  regulatory protein RecX family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO45189.1); contains InterPro domain Regulatory protein RecX; (InterPro:IPR003783) Range:  from: 4264302    to: 4266369    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version