Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ZAT2                                                  --------->At4g35610                                                  ----------->RAV1(2)                                                  <---------ZAT2                                                 -------->P                                                 ------>MYB46(1)                                                 ------>MYB83                                    <---------At4g35610                    <---------At4g35610                                    --------->At4g35610  >>>>>>>>>TBF1     --------->At4g35610                        --------->ARR14(2)       --------->MYB52(1)      <--------P                     <---------ANAC46           <---------ALFIN1       <---------ANAC58        <---------ANAC58<---------ARR14(2)     --------->MYB46(3)      <---------ANAC58     --------- ------>AHL20(2)   --------->MYB52(1)         --------->DEAR3(2)      --------->MYB59       <-------- ->HVH21<---------ANAC58<---------GLK1(2)    --------->PCF2   ----------->GT1             <---------MYB52(1)   ataactatgggcttggctacatagcggattttgaagatagctgatggaacccacctgaagaagaaggtgaattgggtagctcattaagctctgtttgttc  4262500                            --------->ANAC58                           ------>NtERF2                          <---------ALFIN1                         --------->MYB46(3)                       --------->ANAC46                   <---------At4g35610                   --------->At4g35610                   ----------->RAV1(2)                                          --------->ANAC46                  <-----------ARR10                                             --------->ANAC58                ------->TEIL--------->ANAC58                                    ----------->GT1               <---------ALFIN1        ------>ZmHOX2a(1)              <----------ID1             --------->ANAC46    --------->ARR14(2)      --------->CCA1(2)      --------->ANAC58         <-----------HVH21--------->DEAR3(1)            --------->ARR11(3)   --------->ARR14(2) >MYB52(2)   --------->ANAC58    <---------ARR14(2)     <---------ARR11(3)<------NtERF2 -MYB46(3)   --------->ANAC58   <---------CCA1(2)   ---------->DOF2---------->DOF2                 --   ccgctcaactccatcacgcacatctgagccacccaaatctcctacaaaaatatcaaaagatatactaaaaaaaggccgagaaacgcaaaattcgacaatt  4262600                     <---------YAB1                    --------->AHL20(2)                    <---------AHL20(2)             --------->TOE2(3)              <--------P                 --------->ATHB12           <---------ARR11(3)            >>>>>>>GRF7                 <---------DAG2           --------->ARR11(3)           <-----------RAV1(2)          <----------DOF2           --------->GLK1(2)       <----------DOF2                   --------------->AGL15<---------ARR14(2)          --------->RVE1(1) --------->YAB1 <---------MYB52(1)        <---------------AGL15--------->ARR14(2)        --------->AHL20(2) <---------YAB1--------->MYB59  --------->YAB1              <------ZmHOX2a(2) ---->ZmHOX2a(1)   --------->AHL20(2) <-----------HVH21--------->WOX13(1)      --------->CCA1(2) ----   cctacaaaaaaaaaatctaaattaaaattatcagactctttgtcaggtagcctaagtcattcataaactagctttattgagaaacgagatcgaatccaca  4262700                                                                                            <------ZmHOX2a(2)                                                                                           --------->ARR11(3)                                                                                     ================                                                                                     ---------->DOF2                                                                                   --------->LBD16                                                                                  <---------ANAC46                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                  <---------ANAC55(2)                                                                                  <---------HSFB2a(2)                                                                                 <---------LBD16                                      --------->GLK1(1)                        <---------ARR14(2)     --------->WOX13(1)          --------->At4g35610                           --------->ARR14(2)   <---------ATHB12           ---------->DOF2                                --------->HSFB2a(1) --------->WOX13(1)         ---------->DOF2                                  --------->HSFC1(2) ----->GLK1(1)    <---------AHL20(2)  <---------GLK1(1)      >>>>>>>>>TBF1   <---------HSFB2a(1)   --   aatccatcaatctaatagaattaatcgaacaaaagagcagaaatccattagacaagtatagaagaagaagcataccagagggttccgcaaagagatcaag  4262800                             <---------ANAC58                            --------->RAP2.3(1)             ------->PIF5   <------NtERF2             <-------PIF5  ------>NtERF2            <---------DEAR3(2)            <---------At4g35610 --------->MYB52(1)           <---------MYB46(3)<---------ANAC58           <---------DEAR3(1)<---------ANAC46        <---------SPL7     <---------RAP2.3(1)        ------>NtERF2      <---------RRTF1(1)       <---------DEAR3(1)  <---------ORA47(2)      --------->RAP2.6(3)  <---------ERF1     --------->MYB52(1)   <---------RRTF1(2)    --------->TGA1a       <---------RRTF1(3)    <---------TGA1a       <---------DREB2C(2)    <---------O2          <---------DEAR3(1)    --------->ANAC58      <---------ANAC46                                                         --    ----------->HVH21     <---------RAP2.3(3)                                                      --    =================================================bZIP_DOF     <-----------GT1                 <--    --------->ANAC58      <---------RAP2.6(2)                   <---------ANAC58            ---------    --------->ANAC46      <---------RAP2.3(2)                   <---------ANAC58            ---------    --------->O2     <---------ICU4                          <---------GLK1(1)              --------- =============bZIP_DOF   --------->RAP2.6(3)           <-----------HVH21                ------->GAMYB --------->HVH21<-----------------AGL3    <----------DOF2    --------->GLK1(1)        -------->P-----   cttgacacgacggccggtgctattcatggcggcgtaacgacgctcttttctcttccccatcagatttcttactctctcttcagactctaaccccaagcca  4262900                                                                                                <----                                                                                   ------------>CBF                                                                                  --------->ANAC46                                                                             --------->ARR14(2) -----                                   <------NtERF2                             <---------ARR14(2) -----                                 <---------ANAC46                           <---------MYB52(1)<------                                <-----------------------TaNAC69(2)      ------>NtERF2        <------NtERF2   *TSS                       <------NtERF2                            <---------ALFIN1     ------>NtERF2 ------->YAB1                <-----------HVH21                      --------->ANAC58       --------->DEAR3(1) ------->AHL20(2)           --------->ANAC46                        --------->ANAC46       --------->RAP2.3(2) -------ATHB12            <---------ANAC58                          --------->ANAC58       --------->RAP2.6(2) >ANAC58                  <---------ANAC58         <----------DOF2--------->MYB52(1)      --------->RAP2.3(1) >ANAC58               <----------DOF2    ----------->GT1         ------>MYB83    --------->ANAC58 >ANAC46              <---------ANAC58   ----------->GT1          ------>MYB46(1) --------->ANAC58 ---->WOX13(1)        <---------ANAC58  --------->DAG2         --------->MYB46(3)------>ZmHOX2a(1) --   attaaaaaaaaaaaaccagaagtagctttcgcgtcgcgtcgaaaggttaaaaactttatattcgaaccaaacgacaccgtttcctcgcaatagccgccta  4263000                                                                   <---------YAB1                                                                  <---------AHL20(2)                                                             --------->AHL20(1)                                                             <---------AHL20(1)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                          <---------AHL20(1)                                                          --------->AHL20(1)                                                       --------->AHL20(2)                           <                                                       --------->YAB1                        <xxxxxxx                                                    --------->YAB1<---------AHL20(1)        xxxxxxxxx                                                   <---------AHL20(2)                    <xxxxxxxxxxx                                      <---------HSFB2a(2) <---------AHL20(2)             <xxxxxxxxxxx                            <---------YAB1         <---------YAB1 --------->AHL20(2)    <xxxxxxxxxxxx        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       --------->AHL20(2)                    <xxxxxxxxxxxx -----ARR14(2)         <---------RVE1(1)          <---------AHL20(1)                    <xxxxxxxxxxxx ---->MYB52(1)         <---------CCA1(1)          --------->AHL20(1)  XXXXXXXXXXXXXXXXXXXX>MIR870   - ---->ARR14(2)        <---------ARR11(3)       --------->AHL20(2)--------->YAB1        --------->AHL20(2) ---MYB46(2)          --------->ARR11(3)     --------->AHL20(2) <---------YAB1         --------->YAB1 ----->GAMYB        <---------TOE2(3) --------->HSFB2a(2) --------->AHL20(2)          <---------ATHB51   actgccttaggctatttccattgagatattttgaaagtttctaaaaaaaaaatataataatattttattataatttagtttctcttcaattataaacaca  4263100                     <---------YAB1                    --------->TOE2(3)                   <---------ICU4                   --------->ATHB12                   -------->ATHB1                   <--------HAHB4                   --------->YAB1                --------->WOX13(1) ---------ARR14(2)--------->ICU4                                                  <---------AHL20(2) xxxxxxxxxxxxxxxxsmallRNA(le3)                                                 <---------AHL20(2) xxxxxxxxxxxxxx>smallRNA(se3)                                                <---------YAB1 xxxxxxxxxxsmallRNA(le3)                                                   --------->YAB1 xxxxxxxxxxxxsmallRNA(si3)             --------->At4g35610                 <---------ICU4 xxxxxxxxxxsmallRNA(le3)               <---------ZAT14                    <---------YAB1            - xxxxxxxxxxxsmallRNA(le3)              <---------At4g35610            <---------DAG2             xxxx xxxxxxxxxxsmallRNA(se3)    ---------->DOF2          <-----------GT1  <----------DOF2    <---------AHL20(2) -------->ARR14(2)<---------ATHB12     --------->ZAT14             ------>ZmHOX2a(1)   <---------AHL20(2)   catatacacatactctctcaatcattaatctaaagtttttctgcagagaaactattttcaatctctctcctactttattattattttatattttttagtt  4263200                                            <---------ANAC58                                            <---------ANAC46                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             <---------GLK1(1)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <---------At4g35610                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 xxxxxxxxxxxxxxxx>smallRNA(s)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <----------DOF2         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ANAC58         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ANAC58                     --------->AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------TOE1(2)                 ----------->GT1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------ANAC58                <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    <-----------HVH21                 <---------ANAC58 -------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     ---------->ID1      <---------AtLEC2       <- xxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->ANAC46     <-----------GT1    <---------ANAC46  <-   aatgagaaactatgtaagagactactgatggagatgctcttaaacgtcgtgcgtttttgtttttttacattgtccattgcatgtcgtttaaatagtcgat  4263300                                 ----------->GT1                     <---------ALFIN1                     --------->ZAT14                         ---        --------->WOX13(1)       --------->LBD16          <---------ZAT18                      ------    ----------->GT1<------ZmHOX2a(2)               --------->YAB1                       <---------AHL20(2) --------TOE2(3)  --------->ARR14(2)              <---------ATHB12                     --------->AHL20(2) --------TOE1(3)  <---------ARR14(2)          <---------YAB1                        <---------ANAC55(2)   taaggtttgtaaatcagaccgatccacattcagtccggttaacacattacaaatgatcagtatgctcattccacttgcaaagtatcacataaaattccga  4263400  Previous    Next  AGI:  At3g13225.1    Description:  protein binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO45181.1); contains InterPro domain WW/Rsp5/WWP; (InterPro:IPR001202) Range:  from: 4258777    to: 4262903    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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