Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                               --------->YAB1<---------AHL20(2)                                                        <-------TEIL         <---------AHL20(1)                                                     ----------->GT1         --------->ARR11(3)                                                     <---------MYB46(3)      --------->AHL20(1)   ---   <---------ATHB12                               <-----------RAV1(1)        --------->AHL20(2)   --- --------ATHB12                                   <---------ANAC58           <---------ARR11(3)   --- ----->WOX13(1)                    --------->DAG2 <---------ANAC46  <---------ANAC58      <----------DOF2 >DOF2          <---------YAB1   ---------->DOF2  <---------ANAC58  <---------ANAC58----------->HVH21   aatcaatgacttatccatatgaatgaattgtcatcaaaagggacactgaattgtgtggttcatactcatagcatgtcaatatattcgtgaccctttttac  4184200        <---------GLK1(2)        <---------ARR14(2)        --------->ARR14(2)  --------->ANAC58           <---------YAB1          --------->MYB52(1)  --------->ANAC58           --------->ICU4   <-----------RAV1(1) -----GT1 <-------TEIL<---------At4g35610   --------->YAB1           <---------WOX13(1) ------>ANAC46<---------GLK1(2)            <---------ATHB51       <---------YAB1                  <-- ------>ANAC58<---------ARR14(2)         --------->YAB1       --------->At4g35610                 --- ------>ANAC58--------->ARR14(2)        --------->ZAT6     <------ZmHOX2a(2) <-----------GT1      ---   aagcaagacagattcagatttgtgagatgttatgattcactaacaataatgtggctaagggatcagttgtaattgatattatccatttgtgagaaacaaa  4184300                                                                            <--------P                                                                   ------>ZmHOX2a(2)                                                                 <---------ARR11(3)                                                                 <---------AGP1        <---------ANAC58                                                                 --------->AGP1   --------->ATHB51                                                                 --------->ARR11(3)    <---------ANAC58            --------->AHL20(2)                                <---------HSFB2a(2) <---------ICU4            <---------AHL20(2)                                --------->HSFB2a(2) <--------HAHB4 ----       <-------TEIL                     ==================================HOX2a_HOX2a  --------->ANAC55(2) -------AHL20(2)                        =================================HOX2a_HOX2a   <---------ANAC46 ------>AHL20(2)                <-----------HVH21  <-----------GT1<------ZmHOX2a(2)    <---------ANAC55(2) ------>AHL20(1)      <------ZmHOX2a(1) ------>ZmHOX2a(1)     <---------HSFC1(1) --------->ICU4 -----   taaaatagtttcatataaatctaaggactgtctatgtcagtccttagtctattttgccatatttctagatctaatcgggttgcattattacgtagataga  4184400                                                                              --------->ZAT18            --------->YAB1                                                 <------MYB83  --------->DAG2   ------>ZmHOX2a(2)                                      <---------------AtSPL8        ---------->DOF2 --------->ARR11(3)                           <---------AHL20(2)       <-----------RAV1(1) <---------ARR11(3)              --------->TOE1(3)       ---------->DOF2   <------MYB46(1) ----->CCA1(2)     <---------AHL20(2)         --------->AHL20(2)   --------->MYB46(3)--------->YAB1 ---->ARR11(1)<---------YAB1     --------->TOE2(3) ----------->GT1-------->P  <---------ZAT18    ----   tatgatctacttactgatgatttttttttttgaaaccttaatgtataaaaaaatggtttaaaagtactaaccattgttggtccacaaaaataaagggaag  4184500                                 ------>NtERF2                                <----------ID1                             --------->DAG2                        --------->AHL20(2)                                        ----------->GT1                        --------->YAB1  ----------->GT1                ----------->GT1                     --------->YAB1  --------->MYB52(1)           ----------->RAV1(1)            ----------->GT1 --------->DAG2                  --------->DAG2  ---------->DOF2         <  --------->ALFIN1--------->TOE2(3)<---------MYB59         ---------->DOF2  *TSS----------->GT1     - ------>DOF2--------->YAB1 ---------->DOF2           <----------ID1  ---------->DOF2               <-   aaaggagggccaaatcgtaacattaataaaaaaggggccaaactgtaacaacaaaaaaacaaaaagggccacaaagaaaaaagagagaaaataagaagag  4184600                                                                                              -------                                                                                              <------                                                                                              -------                                                                                          --------->LBD16                                                                                         --------->ANAC46                                                                                        <-------PIF5                                                                                        ------->MYC2                                                                                        ------->PIF5                                                                                        <-------MYC3                                                                                        ------->MYC3                                                                                        <-------MYC2             <---------ZAT2       <----------DOF2                                      --------->ANAC46             --------->ZAT2     <---------ANAC46                                       --------->ANAC58       <------ZmHOX2a(1)   <-----------RAV1(1)                                      <---------WRKY45      ----------->HVH21    <---------MYB46(3)       --------->ANAC58                <---------ZAT18 ----------->HVH21     <-------TEIL             ----------->RAV1(1)                 --------->ZAT18 --------->LBD16     <---------ARR14(2)       --------->MYB46(3)                    <---------WRKY38(1) ---------HSFB2a(2)  --------->ARR14(2)      <---------At4g35610                ------>ZmHOX2a(1) -------->LBD16     <------ZmHOX2a(1)        --------->At4g35610          ------>ZmHOX2a(1)   <------ --------LBD16    <---------TOE2(3)   <---------YAB1--------->ANAC58------>ZmHOX2a(1)  --------->ANAC58   tcccggacaggaccgagcttgaggattcgttgttgcctttatgactcagccaacaagaaccagactaatcctagtcctagtcctagtccacgcgcgaata  4184700         ---------->DOF2                                            --------->GLK1(2) -->ARR14(2)                                                       --------->ARR11(3)            <--- ---ARR14(2)                                                       <---------ARR11(3)            ---- --->TaMYB80                                                       <---------GLK1(2)             ---- ---KAN4(2)                   --------->GLK1(1)                   <---------RVE1(1)           <------   tacaaacgtcttaaagccatttgatagaaccgatttccaagggttttgctcagaaaaaacacagagagagattttggaattcgatgaatagtggtgatac  4184800                                                   ----------->HVH21                                                   ----------->TGA1                                                 --------->ZAT2                              --------                                                 <---------ZAT2                              --------                                                 --------->At4g35610                      <---------ZAT2                                            --------->LBD16                               --------->ZAT2                                            ------>NtERF2                              --------->DEAR3(1)                                           <---------LBD16                           ------>NtERF2          <---------At4g35610           <-----------GT1                             <---------ALFIN1       <---------MYB52(1)           --------->ARR11(3)                           <---------PCF5       --------->DOF5.7(2)          <---------ARR11(3)             <----------DOF2 --------->ATERF1(1) ------DAG2              ------>ZmHOX2a(1)<---------LBD16   <---------REM1(1)   <-----------TCP11(1) ----->TOE2(3)     <-----------GT1  <---------GLK1(2) <---------DEAR3(1)      <---------ANAC58 ----->TOE1(3)   <---------AHL20(2)<---------RVE1(1)--------->MYB52(1)        <---------ANAC58 -----GT1 --------->At4g35610  --------->LBD16   <---------At4g35610    <---------YAB1<------NtERF2   cttatcgacgttagctcaatttatctcctcttccgagagatttttccggcgagctgacggtgatgtagtcttttgttattgctgggccaccgtgctcgca  4184900                                             --------->ARR14(2)                                          <---------YAB1                                       --------->GLK1(2)                                     <----------TaMYB80                                     --------->HSFB2a(1)                                     <---------GLK1(1)                                     --------->GLK1(1)                                    <---------ARR14(2)                                    --------->ARR14(2)                                  --------->LBD16                                 --------->HSFB2a(2)                                 --------->LBD16                                 --------->ANAC46                                 <---------HSFB2a(2)                                --------->HSFB2a(2)                          <---------ANAC58       <                                <---------LBD16                   <<<<<<<<<TBF1      --------->ARR14(2) ---------->ID1                 <---------HSFB2a(2)     <---------YAB1     <-----------HVH21        - ->ANAC58                   <----------DOF2 <---------GLK1(2)  <<<<<<<<<TBF1 <---------ANAC58       < ->ANAC58                 ----------------->AGL1     --------->WRKY18(1)----------->RAV1(2)         -   cttgtcttcattcttctctaccaattcttcctttcccggaaattccgattcttcagtcatgcttcttcttcttcccctgtcgtctcggtttctcaatctc  4185000         --------->YAB1                                             <---------CCA1(2)        <---------ATHB12                                        <---------ANAC46      --------->WOX13(1)                                        ----------->GT1                    <-     <---------------AGL15                                      <---------ANAC58                   <-    ----------------->AGL1                          <---------ARR14(2)                             <- ---------ZAT2  --------->DAG2                      --------->ARR14(2)        --------->TOE2(3)  <--- -------->ZAT2 ---------->DOF2            <----------DOF2       <---------ANAC58             <------- ---------At4g35610----------->GT1     --------->ARR11(3)   <---------At4g35610         <----------DOF2 -------->At4g35610<---------ZAT6      <---------ARR11(3)   --------->At4g35610<----------DOF2<------   tcagctcccaatcagggtaaagtgttaaactttcaatttagtatctttttgccgaatttgtttgctgcgtaaatctataacctttagcctctttcccttt  4185100  Previous    Next  AGI:  At3g13062.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41766.1); contains InterPro domain Lipid-binding START (InterPro:IPR002913) Range:  from: 4184576    to: 4187091    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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