Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ATHB12               --------->ICU4                                       --------->HSFB2a(2)             --------->YAB1                                         <---------HSFB2a(2)             <---------ICU4                                         <---------LBD16            --------->ICU4                                      --------->ARR14(2)            <---------YAB1                                      <---------ARR11(3)          --------->YAB1                                        <---------GLK1(2)         --------->TOE2(3)         <---------YAB1                                         <---------ARR14(2)        --------->YAB1      ------>ZmHOX2a(2)                --------->YAB1           --------->ARR11(3)    <---------KAN4(1) --------ARR14(2)    <---------ANAC55(2) <---------YAB1       ----------->ARR10       --------->KAN4(1) ------->ARR14(2)    --------->ANAC55(2) --------->ICU4----------->GT1   <---------ATERF1(1)      <-- ----ZmHOX2a(1)<---------YAB1>>>>>>>>>GATA-1      ---------->DOF2--------->GLK1(2)   <---------KAN4(2)   ggatttgatctatgattatgattaagtaatagataaaactataatgaatagaaaaagaagaaaaaagattctcggagtctccaagggaacaatctcaatt  4180200                                              <---------WOX13(1)                                            <---------ICU4                                         --------->YAB1                   ---------->DOF2                 <----------ID1      <------ZmHOX2a(2)       ---------->DOF2              <----------DOF2        ----------->GT1             --------->ARR11(3)    --------------->AGL15           <---------DAG2  <---------ATHB12         ---------->DOF2 <---------YAB1 <---------------AGL15       <---------CCA1(2) -------YAB1  ---------->DOF2       <---------ARR11(3)   ----------------->AGL1    <-------TEIL     <   ctcaatgaaacagagaaaaaggccaaaaaaaaagaagagatcatcgtaattgccattttcccacaaagagtcactaaaaagaaggctcataacttttttt  4180300                                                           --------->MYB59                                                           --------->DAG2                                                           <---------TOE2(3)                                                      <---------AHL20(2)                                                     --------->AHL20(2)                                                   --------->TOE2(3)                                                 <---------ATHB12                                                ------>MYB83----------->GT1                                                ------>MYB46(1)                                              <---------MYB111(1)                                              --------->MYB46(3)                               ------                                              --------->AtMYB61                    <-------GAMYB<----                                              <---------MYB46(2)                   <---------ANAC58                                             --------->ANAC46                  --------------------->WRI1                                        --------->MYB46(3) <---------TOE1(3)   <----------DOF2-------         ----------->GT1     ---------->DOF2 --------->ANAC58        <---------DAG2<---------ANAC58 -----------GT1           <----------DOF2    --------->ANAC58     <-----------GT1 <---------MYB46(3)   tttttctcttgtagtaaaaaactttgcgctttaaagacaacaacaacaccaaacattaaataaggtaataaccttttctcactttggttgcatcattcat  4180400                                                                             <---------ICU4                                                                             --------->YAB1                                                                          --------->YAB1       ------->GAMYB                                                 <---------At5g28300         ----      --------->MYB46(3)                                            <-----------GT1              ----     --------->ANAC58                                       <---------ARR11(3)                   ----     --------->ANAC58  ----------->GT1                      --------->ARR11(3)                   <--- --->TOE2(3)   <<<<<<<<<TBF1             --------->AHL20(2)<---------CCA1(2)--------->ICU4       ---- -----YAB1 <---------ARR11(3)    <----------ID1        ----------->GT1 ----------->GT1    <---------- -->YAB1   --------->ARR11(3)  ------------------------>ANAC81 <----------DOF2         --------->ANAC55(2)   taatggcaaccaagttcttcttcgttcgtaaaaaaaaaacaaaataaaaacacaaacttgtaaatcttttttactgtaataatctctctacgtattgcta  4180500                              ------>ZmHOX2a(1)                            ================HOX2a_HOX2a                            ------>ZmHOX2a(2)                           =================HOX2a_HOX2a                           <------ZmHOX2a(2)                          --------->ARR11(3)                          <---------GLK1(2)                          --------->ARR14(3)                          <---------ARR14(3)                          <---------ARR11(3)                          --------->ARR14(2)            <-----------------AG            ----------------->AGL2            <-----------------AGL3                                                                  -       ------------>CBF   <---------ARR14(2)                                                       <-   <---------AHL20(2)   <---------HSFB2a(1)                                                       <-- ----->ANAC58           --------->HSFB2a(1)                    <-----------GT1                    <-- ----->ANAC58           ----------->ARR10            --------->ARR11(3)                           --- ----->ANAC46<---------------AGL15                   <---------GLK1(2)                            --- ------ANAC55(2)--------->ARR14(2)               ---------->DOF2      <------------------------ANAC81 ----->ANAC55(2)<---------ARR14(2)          ----------->TBP   <-----------GT1                     --- --CBF<-----------GT1 ---------->DOF2------>ZmHOX2a(1)--------->GLK1(2)           *TSS            <--   cgtaatttatacaatacatatatggaaagatcctctgtccttccctacatataaagattctgtttttccagttttttttgtttgttttgtttttgaatca  4180600                                                                         <-----------HVH21                                                                        --------->O2                                                                        --------->ANAC58                                                                        --------->bZIP60(2)                                                                        --------->bZIP60(1)                                                                        <---------O2                                                                        --------->TGA1a                                                                        <---------bZIP60(1)                                                                        <---------ANAC55(2)                                                         <------ZmHOX2a(2)              <----------DOF2                           <-----------ARR10<-----------TGA1              ==============================================bZIP_DOF    --------->ANAC55(2)          <---------WRKY18(1)                           --------->ARR11(3)     <---------YAB1                                     <---------ARR11(3)  =========================HOX2a_HOX2a                  --------->AGP1 <-----------STF1  <---------YAB1                                        --------->ARR14(2)  ------>ZmHOX2a(1)                                     <---------AGP1--------->MYB52(1) --------->TOE2(3)                                      <---------ARR14(2) ----->ZmHOX2a(2)                                 --------->TGA1a     <---------DOF5.7(2) -----ZmHOX2a(2)                                  --------->ANAC46 --------->ANAC55(2) -------GLK1(2)                                 --------->ANAC46   --------->ANAC46 -------ARR14(2)                                <---------ALFIN1   <---------At4g35610 ------>ARR11(3)          <-------TEIL      --------->YAB1------>ZmHOX2a(2)       ----------->HVH21 < ------>ARR14(2)        <---------GLK1(2)  <---------ATHB12      <-----------RAV1(2)              --- ------>AGP1 <---------DAG2        --------->MYB46(3)  <---------CCA1(2)--------->ANAC58 <---------CCA1(2) -------ARR11(3)    <------ZmHOX2a(2)    --------->WOX13(1)----------------------->TaNAC69(2)    <---   gatccttattcttgacctttcgatcagattcatggcaacgactcaatcacacacctcagatcttacttcaggtaacgtcacttactgacccatctctcaa  4180700                                                                                                   --                                                                                        ------>ZmHOX2a(1)                                                  ------>ZmHOX2a(2)                   <---------ANAC58                 --------->GLK1(2)               <---------GLK1(1)                    <---------ANAC58   ------>ZmHOX2a(1)                            --------->ARR11(3)                 <---------GLK1(1)  --------->TOE1(3)                       <---------ANAC58    <---------DAG2     <------MYB46(1)  <--  --------->TOE2(3)                       <---------ANAC58    <----------DOF2    <------MYB83 <------ ---------YAB1  --------->ARR14(2)     <---------MYB52(1)<----------DOF2   <---------YAB1<-----------HVH21 ------>YAB1    <---------GLK1(2)     <---------DAG2    <---------DAG2    --------->TOE2(3)   ------- ------ATHB12   <---------ARR14(2)    <----------DOF2 ------>NtERF2<-----------GT1 --------->GLK1(1)-   ttatccttaattgtttcagattctggtctaaatttgattcctttacgtttgatctctgcctttcctttttctcaattcttagtgggtttcctgtcgaatc  4180800                                                                 <---------ANAC58                                                                 <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC58    <-------TEIL                   ------>ZmHOX2a(2)    <---------ANAC46 <---------MYB46(3)          <-------GAMYB          --------->CCA1(2) ------->LBD16              --------->MYB52(2)      <---------GLK1(1) -------ANAC46              <---------MYB46(3)     <---------GLK1(2)                             <--- ---ARR14(2)               <-------TEIL          <---------TOE2(3)                             ------ -->ARR14(2)           <---------TOE1(3)         ----------->ARR10<----------DOF2       ------>ZmHOX2a(2) -------->ALFIN1<---------ANAC46 --------->ARR11(3)--------->ARR14(2)               <---------ZAT6---   ccgtggttcatgtttctgatgtgttagggttcgttgatctcgatttggatttagatttgcgagttttgcttttgaaatttttggtagtgatccactagta  4180900                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       --------->ARR14(2)                                                 --------->CCA1(2)                                                 <------ZmHOX2a(2)                                                <---------AGP1                                                --------->AGP1                                                --------->ARR14(3)                                                <---------ARR14(3)                                                <---------ARR14(2)                                                --------->ARR14(2)                                                <---------ARR11(3)                                         <---------YAB1<---------ARR14(2)                                      ------>ZmHOX2a(1)--------->ARR11(3)                                      ===================HOX2a_HOX2a                                 <---------GLK1(1)------>ZmHOX2a(2)                           <---------ARR14(2)   --------->ARR11(3)            <---------ZAT6                  --------->TOE1(3)   ==================HOX2a_HOX2a         <---------ANAC58 ------YAB1      <---------At4g35610  ==========================HOX2a_HOX2a <---------ANAC58 --->YAB1   <---------ZAT6 --------->ARR14(2) ----------->ARR10  <----------DOF2    <---------MYB52(1) ------>ATHB51   --------->At4g35610  =========================HOX2a_HOX2a  <---------ANAC46   taattgaactggaagtgtaagcttaagagaattcgatttccttatgctaagatctgggatctaggctctttgatttttgagtgttcgtttagttcaaatt  4181000                             <---------At4g35610                    <----------DOF2                  <------------------------ANAC81                ------>ZmHOX2a(2)               --------->GLK1(1)                                 ------>MYB83               <---------GLK1(1)                                 ------>MYB46(1)               <------ZmHOX2a(2)                               --------->DREB2C(2)              <-----------ARR10                                ------->GAMYB              <---------ARR14(2)                 <---------YAB1--------->DEAR4(1)              --------->ARR14(2)   ------>ZmHOX2a(2)           --------->DEAR3(1)        <---------AtLEC2              <---------ARR11(3) <---------ARR14(2)           --------->DEAR3(2)     <---------MYB46(3)              --------->ARR11(3) --------->ARR11(3)         <---------ALFIN1       <---------MYB52(1)             <------ZmHOX2a(1)   <---------ARR11(3)   <---------ICU4          <-----------GT1             =============================HOX2a_HOX2a --------->ATHB12       <---------ZAT14   ttggattttgcattaggatctgcttttgttttgctgatcttgttcttgttcatgaatgattcccaccgacttatttgagtttaccggttgtgcatgaata  4181100  Previous    Next  AGI:  At3g13060.1    Description:  ECT5. similar to ECT2, protein binding [Arabidopsis thaliana] (TAIR:AT3G13460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60974.1); contains InterPro domain YT521-B-like protein (InterPro:IPR007275) Range:  from: 4180582    to: 4183982    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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