Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                 <---------ARR11(3)                                           <------                             <---------AHL20(2)                                               -------                            <---------AHL20(2)                                               <-------                 <-----------GT1 --------->ARR11(3)                                    <---------ANAC55(2)     <---------At4g35610 --------->AHL20(2)                                            --------->YAB1 -------->At4g35610     <---------YAB1                                                 --------->ANAC55(2) ---------At4g35610 <---------MYB59                               ----------->GT1   ------>ZmHOX2a(1) -----KAN4(2)<----------DOF2--------->AHL20(2)                   --------->ALFIN1 <---------ICU4    -   tgagctcagcaaatgctttctacctgattatttattatcttcaaaatagtcaagtttgaggcatcaagtggtagaatgtctaaatccttacataatttat  4176100                                                                    <---------TOE2(3)      ----------          ----------->RAV1(1)                               <-------GAMYB              <---------TOE2(3)  <---------YAB1--------->YAB1                              <---------ANAC46         ---------->DOF2 ---------AHL20(2)                                         <------MYB83         <---------ZAT14 ---AHL20(2)    --------->ANAC55(2)                        <------MYB46(1)      --------->ZAT14 -->AHL20(2)    --------->ANAC46   --------->ZAT14         ----------->GT1    --------->ANAC46    <-- --AHL20(2)    <-------TEIL    <---------ALFIN1      <---------ANAC58       <-----------GT1<-------TEIL -------->AHL20(2)   --------->YAB1<---------ZAT14   <---------ANAC58   --------->AHL20(2)<--------P   atttatttttggcaacatacataacataattcaacactgttctaagtaatacatggctagtgggttatataagattatatacttcactaaaggttgataa  4176200                                           <----------DOF2         <----------DOF2                                         <---------YAB1            <---------DAG2------->TEIL                                       --------->YAB1     <---------ICU4    --------->SPL7                                     <-----------GT1      --------->ATHB12<---------SPL7                                    <-----------GT1       -------->HAHB4 <---------ANAC58                                   <---------AHL20(2)    <---------ATHB12<---------ANAC58 ->GT1                             --------->AHL20(2)    --------->ICU4 --------------->AtSPL3 -------ATHB12               --------->TOE2(3)     ----------->RAV1(1)  ---------->ID1   atcaattctcagtttgcattttgccaatatacctcaatttatcatctttagtcccacaaatgatggccacttttgtcgtactgtatgtttgttttcgact  4176300                                        --------->AHL20(1)                             <---------ICU4                             --------->ATHB12                    <---------WOX13(1)  <---------AHL20(2)                  --------->ATHB12      --------->AHL20(2)           <---------PCF2    --------->ATHB51          <------MYB46(1)    -------->ATHB1          <---------ANAC58   <--------ATHB1          <---------ANAC58  <---------YAB1          <------MYB83      --------->ICU4         --------->MYB59    <---------ATHB12         <---------MYB46(3) <---------ATHB51     <-----------RAV1(1)  --------->WOX13(1)                                                        -     --------->ALFIN1    ------------>ATHB5                     <---------AHL20(2)  ---------->DOF2--   tgtttaagtgttgggtcccctcattgatcaattattgaaaaataaaatgggccttactaaaaacatatatttgggttaactagagagaaagcccaaatac  4176400                                                                                                    -                                                                                                    <                            <---------ANAC58                                                        <          --------->At4g35610  <---------WRKY18(1)  --------->At4g35610                             <        --------->YAB1      <---------ANAC46        <---------At4g35610                            --      --------->GLK1(2)     <---------ANAC58 --------->DAG2          <---------YAB1                -- -------->DAG2         ------->GAMYB        ---------->DOF2 <------------CBF         <-----------GT1- -------->DOF2      ----------->RAV1(1)<-----------HVH21   --------->ATHB12 <-----------GT1        --   aaaaagagaatcatcagcgattcaacagaggcttgaacgcgcgtcaaaaagcttagctcaaagattgaattttgattttcacatgtttttcttcataggc  4176500             --------->WRKY38(1)             --------->WRKY45             --------->WRKY12            --------->DOF5.7(2)          <---------ANAC58          <---------ANAC58   <---------YAB1 <---------------AGL15 --------------->AGL15 -------->MYB46(3) ---------ATHB12  *TSS                                                   <---------ARR14(2) -----------------AGL3                               ------>ZmHOX2a(1)   --------->ARR14(2) -----------------AGL2                       <---------ANAC58    <----------ARF1 ---->MYB83<-------GAMYB                     <---------ANAC58--------->ALFIN1   <---------GLK1(1) ---->MYB46(1)   <----------DOF2     --------->YAB1<---------LBD16       --------->GLK1(2) ---------------->AGL3               ----------->GT1 --------->LBD16---------->DOF2 ------>P <---------ANAC46    ----------->HVH21    ----------->RAV1(2)  <---------GLK1(2)    <-------   caaccattaatggcgttgactttgtcaattctctgacaattgtaatttcgttctcctgaaaccgtgggagaaaagaatctgcatttccttcaagttcaac  4176600                                                      --------->ARR14(2)                                                      <---------ARR11(1)                                                      <---------ARR14(2)                <---------ICU4                                                     <---------CCA1(2)                  --------->ATHB12                                                    --------->LBD16                    --------->ICU4                                                   <---------ANAC58                    <---------YAB1                                                   <---------ANAC58            --------->HSFB2a(2)                                                   <---------ANAC55(2)         <---------HSFB2a(2) <-                  <---------GLK1(1)                <---------ANAC55(1)   <---------MYB52(1)  <-------                  --------->GLK1(1)                --------->ANAC55(2)  --------->At5g28300  <-------    --------->LBD16    <----------DOF2            ------>ZmHOX2a(2) <---------ALFIN1 --------->YAB1<-    <---------TOE1(2)  <---------DAG2    <----------DOF2           --------->MYB46(3)<---------ICU4<- --WRKY12      <---------YAB1            <---------DAG2        <---------WOX13(1)   <---------ATHB12<   gtcttccaggtttgattttgatttccttttcccaattccatgacttttttgatccgtatccagtaattgaccaccgtgattcgcgaatcatgattagggt  4176700         --------->ATHB12        <---------YAB1       <---------TOE2(3)                       <---------AHL20(2) --------ANAC58                                --------->AHL20(2) --TOE1(3)                                    --------->AHL20(2)                          <---------YAB1 --TOE2(3)                           <---------MYB46(3)                              --------->YAB1 --------ANAC46                     <---------ANAC46                            <------MYB46(1) ----- --------ANAC58           <---------YAB1  <---------TOE2(3)                     <------MYB83   <----- -------GAMYB    <----------DOF2 <---------AtMYB61                             --------->MYB59-------   ttcgttgttaatgaatggcctttggatgatcaatggtggtgtttgagatttaattgggatttagttatgccctcttggaatttggtatcagcatgagtgt  4176800                                                                           <---------ZAT2                                                                           <---------At4g35610                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                                             <---------ARR11(3)                                                             <---------GLK1(2)                    <--                                                           --------->LBD16 --------->At4g35610   ----                         <---------YAB1                   --------------->AGL15                 -----                     <---------WOX13(1)                   <---------------AGL15              <-------         --------->ARR14(2)                               --------->HSFB2a(2)              <-------TEIL         <---------ARR14(2)                               <---------HSFB2a(2)             --------->CCA1(2)         --------->GLK1(2)                               <-----------------AGL1          <---------ARR14(2) ---->ALFIN1   <---------ARR14(2)             <----------DOF2--------->ARR11(3)          --------->ARR14(2) ----ZAT14     --------->ARR14(2)      <----------DOF2   ----------------->AGL1          <---------GLK1(2) -->ALFIN1--------->At4g35610          <---------DAG2  <-----------GT1   <-----------RAV1(2) <-------   ggagcatttagtatctgaatccgattgatgaaaggttgacacttttctcttttgttttttccagattttgaaatggcagatgggaacacaagattcacgg  4176900                                                                             --------->At4g35610                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                       <-------GAMYB                                                                      <---------ANAC58                                                                      <------MYB83                                                ------>ZmHOX2a(1)     <------MYB46(1)      --------->ARR11(3)                       <---------ANAC58       <---------ANAC58      <---------ARR11(3)                       <---------ANAC58      <---------MYB46(3)    ------->TEIL                           <---------ANAC58          <------MYB83              <----- -------MYB46(3)                           --------->ANAC55(2)       <------MYB46(1)           <----- ----->ALFIN1                 <---------HSFB2a(1)  <---------ANAC58<--------P<---------At4g35610 ---->At5g28300               --------->HSFB2a(1)  <---------ANAC58<<<<<<<<<MYB98            <------- --LBD16              --------->ARR14(2)   <---------ANAC58       <---------ANAC58      <---------At4g35610 --At5g28300          <---------ARR14(2) <-----------GT1          <---------ANAC58  --------->AtLEC2   tggatgaagctcttgtggcgatgggatttggcaagttccaaatttacgtccttgcttacgctggaatgggttgggttgcagaggccatggagatgatgct  4177000  Previous    Next  AGI:  At3g13050.1    Description:  transporter-related. similar to ATOCT4 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER4), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT3G20660.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64534.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 4176518    to: 4179073    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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