Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------REM1(2)                              <---------ARR14(2)                              --------->ARR14(2)                            --------->ZAT18               --------->YAB1                            <---------ZAT18     ------>ZmHOX2a(1)                         <---------ANAC58       --------->LBD16                        --------->ARR11(3)                         <---------ANAC58     ----------->RAV1(2)--------->TOE2(3)     <---------ARR11(3)                    ------>MYB46(1)        <---------At4g35610 ------->TEIL           <---------At4g35610                    ------>MYB83           <---------GLK1(1)   -------->P          ---------->DOF2                  <---------MYB59--------->ANAC58         <---------ICU4       --------->ATHB12              --------->MYB46(3) --------->ANAC58        <---------YAB1       <---------YAB1       --------->GLK1(2) <---------ANAC46 ------->TEIL --------->YAB1     <----------DOF2   ttgtgtaagaatatgaacgacctaattgtgtggacacgctcttgcatctcctgagcatcatcatcaacctcatcttctttatcattgaagctctctctct  4136100                                             --------->ARR14(2)                                             <---------ARR11(3)                                             <---------ARR14(2)                      <---------AHL20(2)                               <---------At4g35610*TSS                        ----------->GT1                              <-----------GT1--------->ARR11(3)         ---------->DOF2             <                        <---------AHL20(2) ----------->ARR10         --------->CCA1(2)---------->DOF2                      <----------DOF2XXXXXXXXXXXXXXXXXXXX>MIR825---------->DOF2    <-----------TBP  <   ctctctctctctctctatctctctcttttattttgctgtctcaagaagatacttgaaacacactcagaaagatagaaagggagttatataaagagcgaga  4136200         --------->REM1(1)         --------->ANAC55(2)                <------MYB83         <---------O2                       <------MYB46(1)         <---------ANAC55(2)               <---------TOE2(3)         --------->O2                      --------->MYB59  <------MYB83                         --------->YAB1  <------MYB46(1)                     <---------YAB1 <---------MYB46(3)                 --------->YAB1  --------->ANAC58 --------->MYB59                   --------->AHL20(2)            --------->ANAC55(2) <---------DEAR3(1)                <---------AHL20(2)       ------->TEIL --------->MYB111(1)           --------->AHL20(2)   --------->ANAC55(2)                          <--- --------->MYB111(2)          --------->AHL20(2)    --------->ANAC46    --------->YAB1          <---- --------->MYB46(2)     <-----------GT1<---------ICU4   --------------->AtSPL8            <---------DAG2 ---------MYB55(1)   --------->TOE2(3)<---------AHL20(2)<---------------AtSPL8            <----------DOF2 --------P     ------------>CBF<---------AHL20(2)   --------->ANAC58   <-------TEIL --------->ANAC46   aggtaggtgctacgtctctcaattcttaaccatttaatttataattaggttttcaagtaatgtactcacttgattcataaacttccacattacttttcct  4136300                      --------->ICU4               --------->ARR11(3)               <---------AHL20(1)               <---------ARR11(3)         --------->LBD16       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->GLK1(1)     --------->ARR14(3)     <---------ARR14(3)     --------->ARR11(3)  <---------YAB1     <---------ARR14(2)-------->ATHB1     --------->ARR14(2)<--------HAHB4     <---------ARR11(3)--------->ATHB51                           <---------ANAC58    --------->GLK1(1) <---------ATHB12                            <---------ANAC58    <---------GLK1(1) <---------ATHB51                          <-----------GT1               <------    --------->At4g35610--------->YAB1                           <---------AHL20(2)        <---------ANAC58    <---------At4g35610<---------ICU4                 ---------->DOF2                <---------AHL20(2)   ----------->ARR10--------->WOX13(1)               --------->AtMYB61              <---------AHL20(2) ------MYB52(1)--------->AHL20(1)                --------->MYB46(3)                 --------->AHL20(2) ------DOF2   --------->AHL20(2)     <----------DOF2--------->ANAC46       ---------->DOF2<---------ANAC58   ttaggcagatccccaaatatatcaattattatctcagaacttttcatcttatccaccaaagtatatttacttgcatacaaagaaaattaaatgcttgtgt  4136400                                                                                     <-----------HVH21                                                                                    --------->TGA1a                                                                                    --------->bZIP60(2)                                                                                    <---------TGA1a                                                                                    --------->ANAC58                                                                                    --------->ANAC46                                                                                    <---------O2                                                                        --------->LBD16                                                                        --------->HSFB2a(2)                                                                        <---------HSFB2a(2)                                                                       <---------LBD16                                                                   --------->HSFB2a(1)                                                                   <---------HSFB2a(1)                              ---------->DOF2                    =============================bZIP_DOF                           --------->ANAC58                    --------->ANAC58     --------->ANAC58                           --------->ANAC58                    --------->ANAC46     --------->O2                       <-----------HVH21                       --------->ANAC58<----------ID1                     ------->MYC3                           <------NtERF2--------->LBD16   ----------                     <-------MYC3                           <---------ZAT2 ===================bZIP_DOF                     <-------MYC2                      --------->ANAC58<-----------------AGL1  *TSS                     ------->MYC2                      --------->ANAC58----------------->AGL1  <----- <------------CBF   <---------ANAC58          --------->At4g35610---------->DOF2  <---------ALFIN1 -----RAV1(1)       <---------ANAC58       ---------->DOF2  --------->ZAT2 ---------->DOF2------->TEIL   tggcattgcaacttaagagagaacgtgtcaagaaaagagaaacgaagaagcagagagaagccagcacgaaagtcccggaaagggacacgtcgaacctgtc  4136500                                                                              --------->ANAC58                                                                              --------->ANAC58                                              --------->AHL20(2)         --------->DAG2            --------->O2                   --------->TOE2(3)       ----------->RAV1(1)         --------->ANAC46                  --------->TOE1(3)      --------->ANAC58        --------->ANAC58  ------>ZmHOX2a(1)              ------>ZmHOX2a(2)                --------->ANAC58 --------->MYB46(3) ->RAV1(2)  <---------O2       <---------ARR11(3)               <------ZmHOX2a(1)--------->MYB52(1)-- ----CCA1(2)<---------ANAC46   --------->ARR11(3)    <---------ANAC46   ---------->DOF2   --------->ANAC58   tctccttatatacgacgtctaatgtcaactcgtgatctcttaaacccttaaaatggcgaagaacaaggacgacataaagtatgcaacggctcaagcgaag  4136600                                     ----------->HVH21                                   --------->ANAC58                         <---------At4g35610                         --------->At4g35610                              ------>NtERF2                        --------->ANAC58                      ------>ZmHOX2a(2)    <---------At4g35610                        --------->ANAC58                     <------ZmHOX2a(2)    <---------AGP1   <-                  <---------ANAC46 <---------ANAC55(2)      --------->ARR11(3)<---------ZAT14   <----                  <---------ANAC58 --------->ANAC55(2)      <---------ARR11(3)--------->REM1(2) -----           --------->ANAC58        --------->ANAC58    <------NtERF2    --------->ATERF1(1)     <----           --------->ANAC58        --------->ANAC46   --------->ANAC58  <------NtERF2     <---------HSFB2a(2) ------->MYB52(1) <---------ANAC58<---------LBD16     --------->ANAC58<---------DEAR3(1)  --------->HSFB2a(2)   ctatcggaagacgaagcaattcgtgtaagctacaaacacgggacaccattagagggaggcaagatcgcagagtcggagcctgtagagctgttctcgagtg  4136700                                    <---------LBD16               <---------------------WRI1                                    --------->SPL7              <---------bZIP60(1)                                  <---------ARR14(2)            --------->bZIP60(1)                                  --------->ARR14(2)         ----------->HVH21        <---------HSFB2a(2)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <-------TEIL        --------->HSFB2a(2)  <---------At4g35610           <---------O2               --------->ANAC58     ------->TEIL            <---------ZAT2                --------->O2  --------->GLK1(1)     <---------ARR14(2)      --------->At4g35610       <-------TEIL ---------->DOF2   <---------ANAC55(2) --------WRKY38(1)           --------->ZAT2           --------->CCA1(2)  --------->CCA1(2) -----ZAT18              <-----------HVH21 <------ZmHOX2a(2)<-----------HVH21         --------->ANAC58 ---->ZAT18           --------->ZAT14 --------->LBD16--------->ARR14(2) <---------ARR11(3) -----ZAT14      ---------->DOF2--------->At4g35610  <---------ARR14(2) --------->ARR11(3)--------->DEAR3(2)   ctcaacgtatcgagaagggaaaagagcagtcagcagcatccggcgatcaaacacagatacaacgtgacatcaaagatatcaagggaacacgtacagacga  4136800              --------->GLK1(2)  <---------ANAC58       ----------->HVH21         <---------ANAC46     <---------At4g35610         <---------ANAC58     --------->At4g35610  <---------ANAC46                     <-----------RAV1(1)     --------->LBD16  <---------ANAC58           <---------ATHB12    --------->ANAC46  <---------ANAC46           --------->AHL20(2)<---------At4g35610   <---------LBD16    <---------ANAC58 <---------ANAC58       <------------AtMYB77   <------NtERF2   <---------MYB52(1)  <---------ANAC58 <---------ETT(2)   tagtccccgctgatagaatcagttacttgggtatagcgtttgcttagttcaataaatgtagacaactgttgctgtctaaataaaacgaactggagcatga  4136900              --------->DOF5.7(2)             --------->TOE1(3)            --------->ANAC58            --------->ANAC58                                                      <-------TEIL            --------->ZAT6                    <---------ICU4                     --------->CCA1(2)          <---------DOF5.7(2)          --------->TOE1(3)               ----------->GT1      ------>MYB46(1)          --------->MYB52(1)           --------->TOE2(3)            --------->MYB52(1)      <--------       --------->At4g35610--------->TOE2(3)  --------->AHL20(2)     <-----------GT1         ------>MYB83   tgttctaagagctaacgctaacttctaacttcaatctctaaccttgaataaatacagcatatagatagattaactgttaaaagattcaaaaaccaaatct  4137000  Previous    Next  AGI:  At3g12955.1    Description:  auxin-responsive protein-related. similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G72430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23828.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 4135507    to: 4136150    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12960.1    Description:  similar to seed maturation protein [Glycine tomentella] (GB:ABB72392.1) Range:  from: 4136495    to: 4136835    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g12965.1    Description:  other RNA Range:  from: 4136968    to: 4137681    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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