Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------MYB46(3)                            <----------DOF2                                        <------MYB46(1)                               ---------------                            <---------AHL20(1)                          <---------AHL20(2)                            <---------AHL20(2)                         --------->AHL20(2)                            --------->AHL20(1)                         <---------AHL20(1)    --------->TOE1(3)    --------->YAB1 <------MYB83                   <---------AHL20(2)    --------->TOE2(3)    --------->AHL20(2)                            --------->AHL20(1) ----->GT1              <---------YAB1<---------WOX13(1)             ------->TEIL--------->DOF5.7(2) >STY1(2)           <---------ANAC46<---------MYB46(3)        XXXXXXXXXXXXXXXXXXXX>MIR417--------->YAB1 -STY1(2)         ----------->GT1   --------->ATHB12        --------->LBD16     --------->TOE2(3)   aaaaaaccctaatgtaagagttgtttataatatatcagtgattggttcaagttttttatacccagataatgaatttattcaacgtttactttgatatttt  4104200                                                                        <---------ARR11(3)                                                           <------MYB83 <---------ARR14(2)                                                           <------MYB46(1)                                                           ----------->GT1                 --------->ARR11(3)                                                          <---------AtMYB61              --------->ARR11(3)                                                          --------->MYB111(2)      <-------GAMYB <---                                                          --------->MYB46(2)      --------->MYB46(2)                                                          --------->MYB111(1)     --------->MYB111(2)                                                          <---------MYB46(3)      <---------MYB46(3)                                                          --------->MYB59      <------MYB46(1)  -----                                                         <--------P     --------->ARR14(2) <---------AHL20(1)                     <---------AHL20(2)                  <---------MYB55(1)    <------MYB83--------->AHL20(2)                     <---------YAB1                     <-------GAMYB   --------->ARR11(3) <---------ARR11(3)                    <---------AHL20(2)     --------->AHL20(2)         ----------->ARR10  <---------ARR11(3)        --------->DOF5.7(2)   <---------ALFIN1         <---------MYB46(3)     --------->MYB59   <----       --------->TOE2(3) <-----------GT1<----------DOF2--------->MYB55(2)--------->CCA1(2) --------->AHL20(1) ------>WRI1      <---------YAB1--------->ANAC46       --------->ALFIN1 --------->ARR11(1)--------->CCA1(2)   tgaattcaacgtttactcttatttttattaccacacatcaaacttttatatagaggggggttggtaaatgagaagatatgtaggtagttgagatatatta  4104300         ------>ZmHOX2a(1)   ----------->RAV1(1)                --------->ANAC58   <-----------GT1         --------->SPL7                       --------->ANAC58 <---------AHL20(2)   --------->MYB52(1)        <---------ARR11(3) --------->AHL20(2)<---------ANAC55(2)          --------->ARR11(3)    <---------YAB1 ------YAB1<----------DOF2 <-------TEIL<---------AHL20(2)      ------->TEIL ---->AHL20(2)     --------->ANAC55(2) --------->AHL20(2)--------->ICU4 -----AHL20(2)    <-------TEIL  ------->GAMYB  --------->GLK1(1)--------->ANAC46       ------>NtERF2   aaattaaactcctctttcgatacataacgtacaacagaaaattaaactgaaatcttggcattatgcacgcttgtgattagacaaatcgacgactagttta  4104400                                                 --------->ANAC58                     <---------ICU4              --------->ANAC58                   --------->At4g35610                 --------->AHL20(1)              --------->ANAC55(2)            <---------ARR14(2)                 <---------AHL20(1)              <---------ANAC55(2)            <-----------GT1                --------->AHL20(2)               <---------ANAC46              <---------CCA1(2)            --------->AHL20(2)                  <-------TEIL                 <---------AHL20(2)         --------->YAB1       --------->YAB1  <---------MYB52(1)             --------->AHL20(2)    <-        <---------YAB1  <-----------GT1     <---------TOE1(2)              <-----------TBP      <----      --------->YAB1<---------AHL20(2)     <-----------RAV1(2)          <---------YAB1       --------     --------->ICU4 --------->AHL20(2) <---------ARR11(3)            <---------MYB52(1)    <---------     <---------YAB1 <---------YAB1  --------->TOE2(3)            <-----------GT1--------->ARR14(2) <-   ccaagtgattataatcaaatatataattacattcaaaacattatctcaggtacgtaaacttctctattttcgttactatttatatccgcttcaaattgtt  4104500                                                                                                    - --------DAG2                                                               ------------>CBF        < -------GT1                                                             --------->REM1(2)        <--- --->GT1     <---------DAG2--------->MYB46(3)                          --------->ALFIN1       <------ ---CBF      <----------DOF2------->GAMYB                            --------->ALFIN1         ------- ---------DOF2  ------------>CBF                               --------->YAB1                <-------   acttttcaacattcacttttcaatattcaaccaaaaaacaaaaacaaaaaacattcagttttcaagcagaagtgtggagacaatgggtatcaatttcgag  4104600                                                     --------->YAB1  ------>MYB46(1)                                    --------->ATHB12  ------>MYB83                               ---------->DOF2  --------->ANAC46                         ----------->HVH21                      --------->DEAR3(1) -------->AtMYB61                        <---------ANAC58                        --------->ANAC58 ---------MYB59                          <---------ANAC58                        --------->ANAC58 ---ZmHOX2a(1)          <-----------HVH21<---------ANAC46                        --------->ANAC46 ---HSFB2a(2)       <---------ANAC46   ------->GAMYB<---------YAB1              <---------LBD16 -->HSFB2a(2)       <---------ANAC58--------->MYB52(1)                         <---------ALFIN1 --ANAC46           <---------ANAC58<---------DOF5.7(2)<---------WOX13(1) <---------ZAT6    ---------   gaccaaaccacattgttcaatttcgtggtcagagaaggtaacggcgtgaaaggaatgatagactcgggcctctctagtgttccacggcccttcgtccagc  4104700                                     --------->ALFIN1                                 ====================MYC_MYB                                 <---------O2                                 ====================MYC_MYB                                 --------->O2                                 ======================================bZIP_DOF                                 --------->TGA1a                                 <---------ANAC55(1)                      <-----------TCP11(1)                                 <---------ANAC58                        --------->ANAC46                        --------->DAG2        --------->MYB46(3)  ------>MYB83                     --                       ====================bZIP_DOF               ------>MYB46(1)            --------                       ---------->DOF2      -------->P            -------->P                ---------                ------>NtERF2    <---------TGA1a            <----------DOF2      ----------->RAV1(1)               <---------ETT(1)  <---------ANAC58          --------->HSFB2a(1)  --------->ANAC46   --           --------->ARR14(2)    <---------ANAC46          ------>ZmHOX2a(2)  --------->ANAC58     --           --------->GLK1(2)     --------->ANAC55(2)     <---------ARR11(3)   --------->ANAC58 <-----           <---------ARR14(2)    <---------ANAC55(2)     --------->ARR11(3)--------->PCF2 --------->ALFIN1 >SPL7    <---------ARR14(1)  <---------MYB52(1)      <---------ATHB12  --------->RAP2.6(3)<---------bZIP60(2)   ctctctctgagcgaatcccgacccaaaaagcccttacgtgtgaggctacccagccaatcgatctttccaacctagacggcccacaacacaaggaggtggc  4104800                                                                          <---------ANAC46                                                                        ----------->GT1                                                                        <------MYB83             --------->ZAT2                                             <------MYB46(1)             <---------HSFB2a(1)                                       <---------AtMYB61             --------->At4g35610                                       <---------DEAR3(1)             <---------At4g35610                                       --------->MYB111(2)             --------->HSFB2a(1)                                       --------->MYB46(2)    <---------GLK1(2)    <---------O2        <---------AHL20(2)        --------->MYB111(1)    <---------ARR14(2)   <---------TGA1a     --------->AHL20(2)        <---------MYB46(3)    --------->ARR14(2)   --------->O2       --------->ICU4             --------->MYB55(2) ------->ANAC58    ------>NtERF2       --------->ANAC46               <---------MYB55(1) ->ALFIN1    <---------HSFC1(2)       --------->LBD16                 <--------P<-----------GT1 >ATERF1(1)  --------->HSFC1(2)      --------->HSFB2a(2)             <-------GAMYB ------->ANAC58 ------>NtERF2 <---------ANAC58                     <---------TOE2(3)             <--- ------->AtLEC2 --------->At4g35610  <-----------RAV1(2)           <---------YAB1    --------->At4g35610 -NtERF2     <---------ZAT2   <---------ANAC58      --------->ETT(2)<---------MYB46(3)           <---   caagcagattgtcgaagctgccgagacacttggcttcttccaggtaattaatagtcgacacatagtattttggttggtgtataaaccagctatacatgag  4104900                                                                                                   --                                               --------->ARR11(3)                                  --                                               <---------ARR11(3)                             <------                     <-----------ARR10        <---------CCA1(2)                           --------->ARR11(3)                     <---------ARR14(2)--------->bZIP60(1)                                <---------ARR11(3)                   --------->LBD16     <---------bZIP60(1)       --------->ZAT14          --------->AHL20(1)                 <---------LBD16      <---------TOE2(3)          <---------ZAT14          <---------AHL20(1)     ----------->GT1 --------->ARR14(2)----------->GT1           --------->ZAT18        --------->GLK1(2) ------ANAC58   <---------ANAC46      ----------->STF1        ----------->GT1        <---------TOE2(3) ------ANAC58----------->HVH21      ----------->TGA1      ---------->DOF2      <---------TOE2(3)  ---   cgtgaacatgtaaatttgacgcggatattacttacaaaatgacgttatatatcttggaaaaaaagagtaaactgggcttataagattgagaatattttac  4105000                                                                                              -------                                                                                              -------                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                --------->ANAC58   <---------MYB46(3)      <---------ZAT2       --------->MYB46(3)                       --------->ANAC58  --------->ALFIN1         --------->ZAT2 ---->MYB46(1)------->TEIL                    <------ZmHOX2a(1) <---------ZAT2            --------->ARR14(2) ---->MYB83  <---------AtLEC2                <----------ID1   <-----------RAV1(2)         <---------ARR14(2) -----GT1   <-------TEIL              --------->ATHB12     ----------->HVH21           --------->ALFIN1 ------>WOX13(1)   <---------AHL20(2)<---------YAB1   --------->YAB1                 <---------ANAC46   caatctctaacaaatgcatgtttaatgagagaagactatatgatttgaggacgaaatgaaaatgacaggtggtgaaccatggtgtttcggtggagctgct  4105100  Previous    Next  AGI:  At3g12900.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G55290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43170.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 4104583    to: 4106119    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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