Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <----------DOF2                                   <---------bZIP60(1)                                   --------->bZIP60(1)                                   <---------TGA2(1)                       <---------ZAT14       --------->HSFC1(2)                       --------->ZAT18       <---------HSFB2a(1)                       --------->ZAT14       <---------HSFC1(2)                    <---------ANAC58    --------->AtLEC2                    <---------ANAC58------>NtERF2                   <-------TEIL ----------->HVH21                 --------->ARR14(2)--------->ANAC46           <---------DEAR3(1)  ------>ZmHOX2a(2)                                 ----------->GT1           ------>ZmHOX2a(2)  --------->At4g35610                             <---------ARR14(2)        --------->ATHB12      <---------At4g35610    <-------GAMYB          ----------->ARR10   ------>NtERF2 <---------ARR14(2)--------->ANAC58 <---------MYB46(3)   --------->ALFIN1          -- -------DOF2   <---------MYB46(3)  --------->ANAC58<---------TOE2(3) <---------ZAT14         --------   tttgcctccatgatcggtggattcgtgctctgatctgacgccatggaagctttgtggttagagagagagagagaagtgtagatttgtgaatcgcagagaa  4095100                                                                    ------->TEIL                                                              <---------AHL20(2)                                                            <---------YAB1                                                           --------->AHL20(2)           <----------DOF2                                 --------->AHL20(1)       --------->LBD16                <----------DOF2    <---------AHL20(2)     <---------LBD16            <------------MYB.PH3(1)  --------->AHL20(1)         ------>ZmHOX2a(1)     <-------TEIL <---------TOE2(3) <----------DOF2      --------->AHL20(2) <---------ARR14(2)   <---   --------->ARR11(1)         --------->MYB52(1)         <---------AHL20(1) <---------GLK1(2)   ----- -------->DOF2<------------CBF<---------DOF5.7(2)     --------->AHL20(2)    --------->ARR14(2) <----- --->GT1------>NtERF2   <----------DOF2             <---------AHL20(2) <-----------GT1       --------   aaaaagatgcggactttattgaggctctttggtaacggctcttttgggttttattttaaaatattatatgaatttacagatttgtcctgagagcgtaacg  4095200                                     <---------ALFIN1                                  ----------->HVH21                                  <------NtERF2                                 ------>NtERF2                                 <-----------HVH21                                <---------bZIP60(1)                                --------->bZIP60(2)                                --------->RAP2.3(3)                                --------->ATERF1(2)                                --------->bZIP60(1)                                <---------ATERF1(2)                                --------->RRTF1(2)                                --------->RRTF1(3)                                --------->RAP2.3(2)                                --------->O2                               --------->ORA47(2)                               <------NtERF2                               --------->RRTF1(1)                               --------->ATERF1(1)                               --------->RAP2.3(1)                              ------>NtERF2                              <---------RRTF1(1)                --------->ANAC46--------->DEAR3(1)        ------------>CBF      <---------RAP2.3(1)          --------->At5g28300      --------->YAB1          <---------ATERF1(1)        --------->ANAC46            --------->AHL20(2)     <---------ATHB12     <---------DEAR3(1)             --------->ANAC58 <-----------ARR10   --------->WOX13(1)   <---------ANAC58               <---------ALFIN1   <---------ARR11(1) ------------>CBF       <---------ANAC58   --------->YAB1--------->ANAC58 <---------ARR11(3)      --- --------HVH21<-----------GT1<---------DEAR3(1) --------->At4g35610       --------->ARR14(2)     ---- -->GAMYB    --------->ARR14(2)--------->DEAR4(2)   --------->PCF2        <---------ARR14(2)   ------ -------MYB.PH3(1)   <---------DEAR3(1)   <-------TEIL --------->MYB52(1) --------->ARR11(3) -------- ->MYB52(1)  <---------ARR14(2)--------->ERF1   <---------At4g35610      <---------CCA1(2)   --------   gtcatcaatcaacaatatacggctcggcttggcgccgtcacacattcgtaaactgccccacggtattttaggcccatatctggcccattaaaaacaagaa  4095300                                                                                    <---------DOF5.7(2)                                                                                  <---------MYB52(1)        --------->TOE2(3)                                                         --------->DOF5.7(2)        --------->TOE1(3)                                                        --------->TOE2(3)        <---------DAG2                                                           --------->TOE1(3)     <-----------GT1    ----------->GT1          --------->ANAC58        <-----------GT1 -------->GT1       <---------HSFB2a(2)          --------->ANAC46 <---------ANAC55(2)<---------TOE2(3) ----->DAG2         --------->HSFB2a(2)          --------->ANAC58 --------->ANAC55(2)<---------TOE1(3) ---->DOF2       <----------DOF2                 --------->ANAC55(2)    --------->AHL20(2) ->ANAC58       <---------DAG2                   <---------ANAC55(2)<---------AHL20(2)          ----- ->ANAC58    <-----------GT1         <------ZmHOX2a(1)<---------YAB1--------->AHL20(2)        <------   aggtaattaaccttatcacctttgggaagaaaatagtgaggaagaccactcacgttatatttgtgcttaagtaattaacttatcgttaatgttgaaacta  4095400                                                                                    <---------ANAC55(2)           --------->bZIP60(2)                                                     <-------TEIL           --------->ANAC46                                              --------->ANAC58          <-------MYC3                                                   --------->ANAC58          ------->MYC3                        --------->HSFB2a(2)        ----------->GT1       <---------ALFIN1           --------->MYB46(3)   <-------TEIL      --------->HSFB2a(1) ---->MYB52(1)         <-------TEIL       <-----------TBP               --------->SPL7 ---MYB52(2)<-----------HVH21    -------->P   <---------HSFB2a(2)       ------->TEIL--------->ANAC55(2)   acgcttgaaccacatgtcaccaatatacatactgcaaccagtggatttatagaaaaatacattttctatttccgaacgttacaaattcgtaactcttctt  4095500                                       --------->DAG2                                      ---------->DOF2                                   <---------------AGL15                               <---------ANAC58         --------->TOE2(3)         --------------->AGL15                               <---------ANAC58  <------MYB46(1)                 ----------------->AGL1                               <---------ANAC46  <------MYB83------------>CBF<----------DOF2                                      <----------DOF2 --------->MYB111(1)         <---------DAG2      ----------->GT1                  <---------ANAC58 --------->MYB46(2)       <-----------GT1 *TSS ----------->GT1                    <---------ANAC58 --------->MYB59   --------->YAB1 ----------------->AG--------->ICU4       --------->AHL20(2)   aagtaggtaaaccatagacaatagtgattcacctttaccaaaaagtgaagagtgtaataactaataggcatgaacaaaaaaatggctttgcttgcaaaac  4095600            <---------ALFIN1                                            <-----------HVH21           --------->ZAT14                                   -------->HAHB4          <---------ALFIN1                                  <---------ATHB12         --------->ANAC46                                   --------->ICU4<-----------GT1       --------->ANAC46                          <---------ATHB12 ----------->RAV1(1)      <---------ALFIN1      ------>ZmHOX2a(1)              --------->ARR11(3)    <---------TOE2(3)      ----------->HVH21   ttcttatcctcaccacacttgtaacaacaatatcagtaatatccagagccaatgaagagctaatgatgcaacaatgtcacaactctgacaatcccacctt  4095700                   ------>NtERF2                  ----------->HVH21                  <---------ETT(1)                  --------->DEAR3(1)       ---------->DOF2              --------->ZAT2            ------>NtERF2              <---------At4g35610       ----------->RAV1(1)         ------>ZmHOX2a(1)              <---------ZAT2            <---------RAP2.6(3)    --------->YAB1     ------->GAMYB              --------->At4g35610      --------->RAP2.6(2)  <---------CCA1(2)   --------->At4g35610     --------->At4g35610               <---------ETT(1) <---------ANAC46  <-------TEIL     ----------     <---------At4g35610             ------>NtERF2<------ZmHOX2a(1)--------->TOE2(3) <---------ALFIN1   gtgtcttcgctgtctaagctccgaccctggttctcatgaggccgacaaagtaggactggctcgtatcatcctcaaatgcatcaactcacacctccttgtt  4095800                                                      <---------ZAT2                                                      <---------At4g35610                                                      --------->At4g35610                                        --------->GLK1(2)                             --------->At4g35610   --------->ZAT14                             --------->ZAT14       <---------ZAT14        --------->ALFIN1                         --------->ANAC58     <---------ARR14(2)       <---------RAP2.6(2)                         --------->ANAC58     --------->ARR14(2)      <---------ZAT18              <---------ALFIN1          --------->ARR14(2)            <---------ZAT14           <----             <-----------------AGL1    <---------GLK1(2)              --------->ZAT14   --------->MYB46(3)             ----------------->AGL1 --------->HSFB2a(2)       ---------->DOF2   <---------GLK1(1)   <             <-----------------AGL2 <---------HSFB2a(2)   <---------ANAC46<---------ARR14(2)    <---- ----------->WRI1<----------DOF2  --------->MYB52(1)  --------->ZAT2 --------->ALFIN1 --------->MYB52(1)   ctcaccaagaacgcttccactttgggctcgcagcactaccagaatccaaatactgcagcagcgttgaagcagtgcggtttgggtttctcaacggctaagc  4095900                                                                <---------ANAC46                                                             <---------WRKY12                                                             ---------->CDC5                                                            --------->TGA2(2)                                                           <-----------TGA1                                                           <-----------HVH21                                                          --------->TGA2(1)                                                          <---------TGA1a                                                          <---------TGA2(1)                                                          ==============MYC_MYB                                                          --------->bZIP60(1)                                                          <---------bZIP60(1)                                                          <---------ANAC55(2)                                                          --------->TGA1a                      ------                                                          <---------O2                         ------                                                          --------->O2                         ------              <---------RAP2.6(3)                        ----------->STF1                      ------              ------>NtERF2                              <-----------STF1                     -------   <------NtERF2<---------ALFIN1                        <---------TGA2(2)            --------->LBD16   --------->ALFIN1                                    ----------->TGA1           ------>ZmHOX2a(1) <---------ANAC58 --------->ANAC46                     ----------->HVH21      --------->ARR14(2)----- <---------bZIP60(2)        <-----------GT1        <---------ANAC58      ----------->GT1  <---------ANAC58 <---------ANAC46 --------->ANAC58                 <---------ANAC46      <---------MYB46(3)  -------- <---------ANAC58 --------->ANAC58                 <---------ANAC58     --------->ALFIN1  <---------ANAC58 -----AtLEC2 <---------ETT(1) <---------LBD16     <------NtERF2<------NtERF2  <---------ARR14(2)----- -----------------------TaNAC69(2)      <----------ID1--------->SPL7 <---------AtMYB61<---------MYB52(1) -----ICU4   --------->RAP2.6(2)--------->LBD16 <---------DEAR3(1)----------->HVH21<---------LBD16---   atggcgtgggagaggccgacactcaacttataaccggagattacgacaaggctgcgtatgacgtcagcgtgaaggtggtgaatcctccggtatcgtgccg  4096000  Previous    Next  AGI:  At3g12870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47924.1) Range:  from: 4094424    to: 4095044    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12880.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT4G15750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47926.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62928.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 4095542    to: 4096243    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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