Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <------ZmHOX2a(2)                                            <---------ARR14(2)                                            <---------ARR11(3)                                            --------->ARR14(2)                                          ----------->ARR10                                 ----------->HVH21                                <-----------TGA1                                <-----------HVH21                               --------->ANAC55(2)                               --------->ANAC58                               --------->TGA1a                       --------->GLK1(1)                               <---------O2 --------->ARR11(3)     <---------MYB52(1)        =================================bZIP_DOF                 --------->LBD16        ---------->DOF2        --------->bZIP60(1)               --------->HSFB2a(2)       --------->YAB1          --------->bZIP60(2)              <---------LBD16      <---------ATHB12         <---------bZIP60(1)             --------->MYB52(1)   <---------------AGL15       --------->ANAC46         --------->WOX13(1)   --------------->AGL15       --------->ANAC58 ------>ZmHOX2a(1)<---------HSFB2a(2)        ---------  ----------------->AGL3       <---------TGA1a------>ZmHOX2a(2)--------->SPL7              <---------ATHB12 ---->GLK1(2)                  --------->O2 --------->AGP1    <---------ARR14(2)           <---------YAB1 ----GLK1(2)     <<<<<<<<<TBF1 <---------ANAC55(2)   --------->TOE2(3)                --------->GLK1(2)   tccttccaataaaagcttcttcttcaaatagtcccgtcaccgattagatcctgaacatcaatcggtaccggaagtccaagacgaagcgattccatgattc  4079200                                             --------->ANAC58                                             --------->ANAC58                                             --------->ANAC46                                           <---------ANAC58                                      <---                                           <---------ANAC58         ------>ZmHOX2a(2)           <----                                     <----------DOF2               <------ZmHOX2a(2)            -----            <---------bZIP60(2)      <---------DAG2               --------->ARR14(2)            <----          <------ZmHOX2a(1)     <---------GLK1(1)             <---------At4g35610               <----        --------->ANAC58    --------->HSFB2a(2)               --------->At4g35610         <---------LBD16 >ATHB12--------->ANAC58    <---------HSFB2a(2)    --------->YAB1 <---------ARR14(2)     --------->MYB52(1)   gttcgaagacaaggacatggcaagggatttgtagaactcctttttgctcgtaaccatactcttgagcagatcggtttagtaaaccgatgaaaaccggatg  4079300                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                      <---------ARR14(2)           --------------->AtSPL3                    <---------MYB52(2)             <---------------AtSPL3          ------>NtERF2                        --------->ETT(2)        <---------LBD16                        --------->WRKY38(1)<---------HSFB2a(2)      --------->ARR14(2)                       --------->WRKY12   --------->HSFB2a(2)      <---------ARR14(2)                    <---------ANAC46     <---------LBD16                 <---     --------->At4g35610                   ------>MYB83 <---------ANAC55(2)                     <----    ----------->ARR10 --------->ARR14(2)   ------>MYB46(1)      <---------LBD16               <------ ----GAMYB--------->LBD16                --------->TOE2(2)     ------>ZmHOX2a(1)             -------- --MYB46(1)    --------->MYB52(1)   <-----------HVH21   <---------ANAC55(1)             <----------DOF2 ------>GT1--------->ANAC46         <-----------TGA1 <---------MYB52(1)             <---------ANAC58 -----MYB46(3) <---------DOF5.7(2) --------->bZIP60(1)  --------->ANAC55(2)         <---------ANAC58< --MYB83---------->CDC5------->TEIL<---------bZIP60(1) <-------TEIL         <------ZmHOX2a(1)<-------   gttaagtagctccgcgctaacgacgaacctctccatctcgtcacctacgtagaccggtacgtgtccttcgggaacagaggaggtttgcttctttgagcgg  4079400                                   <------NtERF2                                   --------->ATERF1(1)                                  <---------MYB46(3)                                  ------>NtERF2                                  <---------ERF1                                  <---------RAP2.3(1)                                 <---------RAP2.3(2)                                 <---------DEAR3(1)                                 <---------RAP2.6(2)                                 <---------ANAC46                                        ------>NtERF2                              <---------DEAR3(1)                                        <---------TGA1a                             --------->SPL7                                             --------->TGA1a                            --------->ARR14(2)                                          <---------O2                      --------->ARR11(1)                                                --------->O2     --------->DEAR3(1)     --------->MYB52(1)                                          ============= ------ANAC46         <---------ARR14(2)                                             --------->DEAR3(1) --NtERF2 --------->MYB52(1)<---------ARR14(2)--------->At5g28300                    ----------->HVH21 ---DEAR3(1)          --------->ARR14(2)  <---------DEAR3(1)               --------->At4g35610      - ->At4g35610          <---------GLK1(2)<------MYB83                 <---------ZAT14 --------->At4g35610 -----------HVH21    <------ZmHOX2a(1) <------MYB46(1)        <------ZmHOX2a(1)<---------ARR14(2)  -- --At4g35610     <------ZmHOX2a(1)<---------DEAR3(2)   --------->MYB52(1)  <---------At4g35610   ----   cgagtcaccgaagaacggaggaaggattcggaacggcggctaggtcgctgtgaatcggaacggaggagactgtattgagcggaatcagcgacgcgagaga  4079500                                                                      <------MYB83                                                                      <------MYB46(1)             <---------ANAC58                                        <---------------AtSPL3             <---------ANAC58                                        <---------------AtSPL8        --------->MYB52(2)                                          <---------WOX13(1) ========================bZIP_DOF                                 <---------MYB46(3) -------->MYB52(1)                                                --------->ATHB12            <------ --------->HVH21         <---------ANAC46                        <---------YAB1               ------- ----->CCA1(2)<----------DOF2       <----------DOF2        <----------DOF2     --------->MYB52(1) <--   gacgacggattagttgcttcatcgtcttcgtgttgtgactttgagagagagaagagagaaacttttggtgattggtactgaaaacggatgtttgagaatt  4079600                                                                                                    <                                          --------->HSFB2a(1)                                       <                --------->GLK1(2)         <------MYB83 <---------AHL20(2)                          --         --------->WOX13(1)               <------MYB46(1)<------------CBF                          --      --------->GLK1(2)                   <---------HSFB2a(1)                                      -- ---ARR14(2)   *TSS                      <---------AtMYB61        <---------ANAC46                 <- -->ARR14(2)--------->YAB1        --------->ALFIN1   <---------AHL20(2)                        ------ -------HSFB2a(2)          <------ZmHOX2a(1)        <-----------TBP         <---------LBD16   -------   cgagagagaatcaatgagaattttgtgaaggagagagtgagggaaggttttggattttatattgagtcgagggtattttggggaatgtgtatttgataaa  4079700     <---------LBD16    <---------ANAC46    <---------TOE1(1)   <-------TEIL                                                                               ------- <---------SPL7                                                                         <---------AHL20(2) ------MYB83                                                                           --------->AHL20(2) ------MYB46(1)                                                                   --------->AHL20(2) ------->MYB111(1)         <-------TEIL                            <---------AHL20(1)--------->AHL20(1) ------->MYB59   <---------ANAC58                    ----------->HVH21        ------>ZmHOX2a(1)  ---- ------->MYB46(2)<---------ANAC58       --------->YAB1             --------->AHL20(1)<---------AHL20(1) --------------AtSPL8 <-----------RAV1(2)          <---------At4g35610 --------->AHL20(2)    <------- --->DAG2   <---------------AtSPL8      --------->ANAC46 <----------DOF2     --------->TOE2(3)------- --->DOF2   <------ZmHOX2a(1) --------->ANAC46 <-----------GT1    --------->AHL20(2)--------->AHL20(2)   gtaggtacggggaaggagtacttgccaggtacacacacttactcgtaattttccactgactttgaaaaatatataaaatcctaaaaatatataatatgat  4079800                                              <---------AHL20(2)    --------->YAB1                          <---------RVE1(1)                                     ---   <---------YAB1                          <---------ARR11(3)                                    ----  <---------ARR11(3)                       <---------GLK1(2)                                     ----  --------->ARR11(3)               <---------AHL20(2)                                   <---------ARR11(3) --------->RVE1(1)    <---------ARR11(3)   --------->ARR11(3)                           --------->AHL20(1) --------->CCA1(1)    --------->ARR11(3) <---------TOE1(3)                              <---------AHL20(1) ---->GT1        ----------->GT1   --------->AHL20(2)                              <---------TOE2(3)< ----->AHL20(2) <---------TOE2(3)<---------YAB1  <---------AHL20(2)       <---------GLK1(1)      ---- --YAB1   --------->ATHB12    <---------YAB1<---------CCA1(1)             --------->GLK1(1)      ---- -->YAB1 <-------TEIL<---------CCA1(2)   <---------TOE2(3)     --------->MYB52(1) --------->YAB1<----   aaaatatcatattcatttgatgtaaatctttgattatttttttaagatttttttattctcttagataactgtttggatttccattaacaatatatatccc  4079900         <---------ARR11(3)                                              <---------AHL20(2)         --------->GLK1(2)                                   --------->AHL20(2)     --------->YAB1            <---------YAB1               --------->YAB1    <---------YAB1             <---------AHL20(2)  --------->ATHB51      --------->AHL20(2)        -- ------>LBD16               <---------ARR11(3)     --------->ATHB12     <---------AHL20(1)         <- ----->ANAC58               --------->ARR11(3)     <---------ICU4       <---------AHL20(2)        <-- ----->ANAC58             <---------YAB1          --------->ICU4        --------->AHL20(2) <--------- ----------DOF2         --------->YAB1            <---------YAB1     --------->WOX13(1)--------->KAN4(2) ----->LBD16<----------DOF2--------->YAB1       --------->YAB1<---------YAB1 <-----------GT1      --- ----->ANAC46      <---------ANAC46            <---------YAB1<---------AHL20(2) --------->TOE2(3) <-- -----LBD16 --------------->AGL15        <-----------GT1    --------->AHL20(2)<---------At5g28300 ---   cgcattatcataatcttttttgagtataatgatattattgtattttctgatcataattggaattaaaatagcaattaatttaccttggttattctaccaa  4080000                                                                         --------->TOE2(3)                                                                         --------->YAB1                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)              --------->CCA1(2)                                      <---------ARR11(3) ------->ATHB12                                                      <---------AHL20(1) --------AHL20(2)                                                    --------->AHL20(1)     --------- -------AHL20(1)                                            -------->P<---------CCA1(2)     <-------- --GT1       --------->ARR11(3)                    <-------TEIL      --------->ARR11(3)    --------->AHL20(2) ------>AHL20(2)          <---------ANAC58   --------->ANAC46 ------->GAMYB         ----------->GT1 -------AHL20(2)          <---------ANAC58<-------TEIL      --------->ANAC58   --------->YAB1 ------>AHL20(1)        <-----------GT1  --------->CCA1(2)  --------->ANAC58  --------->ICU4---------   tttattgaaagattagatatagtttttttcttgttagtaatagatacacgaggttcatgagcaacccaaaatatatcttaatgatgttgtaaaattaatt  4080100  Previous    Next  AGI:  At3g12830.1    Description:  auxin-responsive family protein. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G56150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47913.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 4078658    to: 4079615    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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