Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                               <---------ALFIN1        <------NtERF2                                                              <---------ABI4(2)      --------->ALFIN1                                                           <---------At4g35610     --------->O2                                                     <---------LBD16          --------->ANAC58                                                    ------>NtERF2  --------->LBD16 <---------O2                                                    <---------ATERF1(1)       --------->ANAC58                                                   <---------RAP2.3(2)        --------->ANAC46                                                   <---------RAP2.3(3)      --------->AtMYB61                                                   <---------DEAR3(1) --------->ARR14(2)   --------->ANAC58                       <---------ANAC58         ----------->HVH21<---------LBD16   <---------ZAT2             <-----------HVH21   <-----------RAV1(2)<---------RAP2.3(1) --------->MYB46(3) --------->AtLEC2          -------->P   <---------ANAC58       <---------ANAC58--------->At4g35610  --------->ZAT2 ---------->DOF2     --------->ALFIN1      --------->ALFIN1--------->At4g35610<---------ALFIN1 ---->GT1 ------>MYB46(1)  ----------->HVH21  <---------ANAC58--------->ZAT2<---------ALFIN1       -- --TOE2(3)------>MYB83<-------TEIL  <------ZmHOX2a(1)<------NtERF2<---------LBD16<-----------RAV1(2) ->MYB59<---------MYB59<---------ANAC46<------ZmHOX2a(1)<------NtERF2 <---------ARR14(2)   --------->ANAC46   aaacaaagagcctaccttcagaggtgcgtttgacaccaggaggaagtggctcgacggcggaagcagcaccgggaacctccacaccaggtggccaagcaac  4028700                        --------->ANAC58                        --------->ANAC46                      --------->CCA1(2)                      --------->ARR14(1)                     --------->ARR14(2)                     <---------ARR14(2)                     --------->ARR11(1)              --------->At4g35610              <---------ZAT2              --------->ZAT2                    --------->MYB59              <---------At4g35610           <---------ZAT6              ----------->RAV1(2)         <---------ANAC46<---------------AtSPL8            <-----------RAV1(2)          <------NtERF2  --------->YAB1           <---------At4g35610           <---------MYB52(1)     <---------At4g35610--------->ANAC58------>NtERF2   -------->HAHB4     --------->At4g35610<----------ID1  <---------RAP2.6(3)   <-------TEIL ------>ZmHOX2a(1)  <------ZmHOX2a(1)  <---------ANAC46<---------ATHB12 --------->RAV1(2)<---------TOE2(3)  ------>NtERF2     --------->ICU4 <------ZmHOX2a(1)   --------->LBD16   ttcctgatgctgaagcagctgaggatacgccaaatgcgatgccgtcgtgttaggcaaatgatggtacatagaggaagacgatgcaagagtccctgaatag  4028800                                                    --------->ANAC58                                                --------->LBD16                                               --------->ANAC46                                               <---------HSFB2a(2)                                               --------->HSFB2a(2)                                              <---------LBD16                                            --------->ARR14(2)                 <-----------HVH21          <---------ARR14(2)                --------->WOX13(1)         --------->GLK1(1)            <-----------------------TaNAC69(2)               <-------TEIL                <---------GLK1(1)          <---------ARR14(2)               ------>ZmHOX2a(2)      <---------ANAC55(2)      <---------At4g35610              <------ZmHOX2a(2)       <---------ANAC46         <---------ZAT2             --------->ARR14(2)       <---------ANAC58         --------->At4g35610             <---------ARR14(2)       <---------ANAC58 --------->MYB52(1)                           -         <---------LBD16              --------->ANAC55(2)    <---------WRKY38(1)              <------      <---------HSFC1(2)              <---------ANAC55(1)  <-----------HVH21                 <-------      --------->HSFC1(2)              <---------O2  --------->ANAC58  --------->ARR14(2) --------->MYB52(1)   ---------->DOF2                   <-------TEIL ---------->DOF2 --------->At4g35610---------->DOF2<   ttgctcaaagcttcggatccatcacgagctaagaaacgatacgtggtatccggaaagtaatggtcagcagaagaaccgtagagagaagaaagaccggttt  4028900                   <---------DEAR3(1)                  <---------At4g35610                  <------NtERF2                  ------>NtERF2                  <---------LBD16                  --------->ATERF1(1)                 <---------RRTF1(1)                 <---------RAP2.3(1)                <---------RAP2.3(3)                <---------RRTF1(3)                <---------RRTF1(2)                <---------ANAC58                <---------RAP2.3(2)                <---------DEAR3(1)            <-------GAMYB           <-----------RAV1(1)           <---------MYB46(3)           --------->MYB111(2)           --------->MYB52(2)           --------->MYB111(1)        <---------MYB46(3)                           --------->At4g35610        --------->MYB55(2)   --------->At4g35610     <---------At4g35610       <---------AtMYB61     <---------At4g35610  --------->ZAT2       --------->ALFIN1      <---------ZAT2       <---------At4g35610   --------->ATERF1(1)      --------->ARR14(2)    --------->At4g35610   <------NtERF2<---------RAP2.6(2)  --------->CCA1(2)  <---------RAP2.3(1)       <---------ARR14(2)    <---------ZAT2  <---------ERF1<---------ANAC58     --------->ARR14(1)  ------>NtERF2 <---------ANAC46    <---------ARR14(2) <---------DEAR3(1)<---------ANAC46 --------->ARR11(1)  --------->At4g35610 <---------ATERF1(2)       <------ZmHOX2a(1)     ----------->RAV1(1) --------->ATERF1(2)     --------->ALFIN1      --------->ATERF1(1) <---------RAP2.6(2)    <------ZmHOX2a(1)      <------NtERF2 <---------RAP2.3(2)  --------->ALFIN1<-------TEIL<------NtERF2 <---------RAP2.3(3) --------->ATERF1(1)  --------->ALFIN1 -------->RAP2.6(3)--------->ALFIN1 --------->ARR14(2) ----------->RAV1(1)               ----------->HVH21 ----DOF2 <--------P <------NtERF2 <---------GLK1(1) --------->ZAT2          <------NtERF2 --MYB52(1)--------->MYB55(2)--------->ZAT2<---------MYB46(3)              <---------ANAC58 ---------LBD16<---------LBD16    ----------->ARR10 ----------->RAV1(1)    <---------ANAC58<---------TOE2(3)   ttggcggcagtggttgttgcggcggaggaggagctggagatacggtggaggcagcagcagcataagaaggttgaagggcgtagctatacaattgacgatg  4029000                                                                                                  ---                                                                                                  ---                                                                                                -----                                --------->DAG2                                                  -----                        ---------->DOF2                                                        <-----                        --------->MYB52(1)                                                     <-----                     --------->TOE1(3)                                                         ------                     --------->TOE2(3)     <---------DAG2                    <---------ANAC46 -------                  <---------GLK1(1)     <-----------GT1             <---------YAB1            -------                  --------->GLK1(1) <----------DOF2               --------->YAB1      <---------ANAC46             --------->DAG2    ---------->DOF2      <-----------HVH21        <---------YAB1   -------            ---------->DOF2<----------ID1  <----------DOF2       <---------YAB1  <-----------RAV1(1)   tgccattcgatcgaaaaaggaaaccctaaaggaaaaagctttctacttttttggtgtcaaacaaattatcaaaattgttgtgtttgtggggtttacaacc  4029100     --------->YAB1 --->MYB46(1) --->MYB83                                                                                    <------ -->GAMYB                                                                               <---------GLK1(2) ---->AtMYB61            <-------TEIL                                                 <---------AHL20(2) ----MYB52(2)           <------ZmHOX2a(2)                                             --------->AHL20(2) ----MYB55(2)          --------->AGP1                             <------------CBF   <---------AHL20(2) --->MYB46(3)          --------->ARR14(2)        --------->ZAT6 <---------AHL20(2)   --------->AHL20(2) -->ANAC58             <---------ARR14(2)      *TSS   <---------GLK1(2)             <---------YAB1 -->ANAC46            --------->At4g35610<-----------GT1       <----------DOF2   <---------YAB1 -->ANAC58     <---------GLK1(2)    --------->ATHB12<---------ATHB12             --------->ICU4   <--   aactcaaacagaacaaaaattctcagatccataaaacttgatttgacattaccactgattctctgttttattgcagtttgcacattattaaattctcttt  4029200                                 --------->DAG2                                ---------->DOF2                            <---------YAB1                                                        ---                           <-----------TBP                                                        <--                   <---------AHL20(1)                   --------->LBD16                    ----------                   --------->AHL20(1)            <-----------GT1                        ------>MYB83                   --------->ARR11(3)       <---------DAG2               --------->At5g28300     ---- ----DOF2         --------->AHL20(2)        <----------DOF2 <---------KAN4(2)      --------->MYB52(1) --------DOF2   --------->AHL20(2)        <---------At4g35610           ----------->GT1 ------>MYB46(1)   ctttcttatcaacacaaaaaatatatagtttttataaagttgggagcttttttacatcagggaataaacactgagggtaactaagaaaccgaacaaagcc  4029300                                                                           <-----------HVH21                                                                          <---------bZIP60(1)                                                                     <---------At4g35610                                                                 ------>ZmHOX2a(2)            -------                          ------>ZmHOX2a(1)                   --------->ZAT14 ---------->DOF2 <------ ---->PIF5             ---------->ID1                    ------>ZmHOX2a(1)--------->bZIP60(1)<-------TEIL -----PIF5     --------->ZAT14                <------ZmHOX2a(1) --------->GLK1(1)           --------- >DOF2         <---------ZAT14 <---------GLK1(2)         ===============HOX2a_HOX2a        <---------GLK1(2) ------->RAV1(2)      --------->ZAT18         ==========================HOX2a_HOX2a<----------DOF2   cctgctatgacttcaacttcagtgtgtcctattgattctttcaatggaggagcaatctcctcactgatctcttctgatgtcaaagctttgttagattcgt  4029400                                                                                                 <---                                                    <---------ALFIN1                          -------  <----------DOF2                        --------->MYB52(2)                               <---------ZAT14  ----------------------->TaNAC69(2)   <---------MYB52(1)                                 --------->ZAT14 -->MYB52(2)                         <---------MYB46(3)     <---------ANAC58           ----------->RAV1(2) ---MYB46(3)     <---------ZAT14   --------->At4g35610      <---------ANAC58      <---------ALFIN1 >ARR14(1)<---------ICU4           <---------At4g35610 <----------DOF2           ------>ZmHOX2a(1)   tgccctttaaactcattacttcacttctacgagcattagctgttagtttgttcaacactttggcatgttttccaacttctctcctcaccccctgcaatgt  4029500                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                          ------>MYB46(1)                                                          ------>MYB83                                                         ----------->RAV1(1)                                                        ------->GAMYB  <---------ATHB12    --------->ZAT6               <---------KAN4(2)          --------->ANAC58 --------GT1    <---------TOE2(3)          --------->GLK1(2)---------->DOF2   --------->ANAC58 ---->GT1       <---------YAB1         --------->YAB1  --------->MYB46(3)   ---------->DOF2<---------   tacaatcagtgagacattaagataacactagaatcagacattgagaatttgagaataaccaacaaagacctattgaacaaaagccagcctaagcttttct  4029600  Previous    Next  AGI:  At3g12680.1    Description:  HUA1 (ENHANCER OF AG-4 1). similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G47850.1); similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G47850.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO64978.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 4025083    to: 4029147    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12685.1    Description:  similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G24350.1); similar to unknown [Populus trichocarpa] (GB:ABK94924.1); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832) Range:  from: 4029190    to: 4030362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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