Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC55(1)                                                     <---------ANAC46                                                    <-----------------------TaNAC69(2)                                           --------->At4g35610                                         ------>ZmHOX2a(2)                                        <---------GLK1(1)                                        <------ZmHOX2a(2)                                        <---------At4g35610                                        --------->GLK1(1)   --------->ANAC58                    <---------ARR14(2)   --------->ANAC58                    <-----------ARR10 ---------->DOF2                       <---------AGP1----------->GT1        --------->GLK1(2) ---->ARR14(2)                         --------->ARR14(2)          ------>NtERF2 -----ARR14(2)                --------->TOE2(3)   --------->ALFIN1 --------->At4g35610 ---->GLK1(2)          <---------YAB1 <---------CCA1(2)            <---------At4g35610              - ----GLK1(1)--------->At4g35610       <---------ARR14(1)          --------->DEAR3(1)          ------- --->GLK1(1)<---------At4g35610    <---------At4g35610     <---------AHL20(2)       ----------->GT1 -   tccgaaagctatacagctctgaattgtcatttccttcatcggatctgctcgagtggcgtataaaatcgccgctccaagaatcaattgagttaaacccaaa  4018200                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                          ---------->ID1   ------>NtERF2        <----    <---------CCA1(2)                          <---------ALFIN1           ----------->HVH21     <---- -------->ANAC58                      <<<<<<<<<NAM      --------->O2    <---------At4g35610    <----- --->DOF2 <---------ALFIN1         <---------ICU4       <---------O2 --------->MYB52(1)       <------ -------->ANAC58          <---------GLK1(2)  ----------->RAV1(1)    ------>ZmHOX2a(1)   <------------   gcacccatagctccacttagactatacatattcttcatcatcccttccaacacttgtctcgtctcatttcctaacgctgacaaatcgcgttccacagttg  4018300                                   ------>ZmHOX2a(1)                               --------->ARR14(2)                               <---------ARR14(2)           =========================RAV       ------>ZmHOX2a(2)      --------->ZAT2       ===================================HOX2a_HOX2a      <---------GLK1(1) --------->At4g35610 =============HOX2a_HOX2a  <---------At4g35610                                        <---------HSFB2a(2) ------>ZmHOX2a(1)      ----------->RAV1(2)                  <---------DEAR3(1)       --------->HSFB2a(2) --MYB83 ----------->RAV1(2)  --------->At4g35610       <----------DOF2              <---------ANAC46 --MYB46(1)<-----------RAV1(1)<---------At4g35610      <---------ANAC58             <------NtERF2 ----MYB46(3)      --------->REM1(1)                   <---------ANAC58         <------MYB83        - ---MYB52(1)     <----------DOF2  <---------ALFIN1------>ZmHOX2a(1)             <------MYB46(1)     - -----AGL1 ------>ZmHOX2a(1)  <---------ZAT2  --------->ARR14(2)             <---------MYB52(1)  <---   gtccttcgatctcctggtgcttcatcttctgcagctcctcttccttcgattcctctggcttcttcggctcggtctctccgcttggtgtcgagaaatacct  4018400                                                              <---------ZAT2     <---------LBD16                =====================================HOX2a_HOX2a                 --------->LBD16                ------>ZmHOX2a(2)                            --------->ANAC58   <---------ANAC58               --------->CCA1(2)                             ------>MYB83       <---------ANAC46              <---------ARR14(2)                             ------>MYB46(1)    <---------ANAC58              --------->ARR11(3)                 ------>ZmHOX2a(2)             ------>ZmHOX2a(2)              <-----------ARR10                  =========================HOX2a_HOX2a              <---------ARR11(3)                ==========================HOX2a_HOX2a ===============              --------->ARR14(2)                <------ZmHOX2a(2)            <---------ARR14(2)              <---------AGP1                   --------->ARR11(3)       <-----------GT1     ---------              --------->AGP1                   <---------ARR14(2)    --------->MYB52(2)<-----------RAV1(2)             <---------CCA1(2)                 <---------ARR11(3)  ------>ZmHOX2a(1)  <------ZmHOX2a(2) ---------->HVH21         --------->ETT(2)     --------->ARR14(2)  ===================HOX2a_HOX2a<--- -------->WRKY38(1)      ---------->ID1       <------ZmHOX2a(1)    ==========================HOX2a_HOX2a ------DEAR3(1)<------ZmHOX2a(2)          ---------->DOF2    --------->ANAC58--------->ARR14(2)  <---   cggtgaccatgtttcagatctaagtttgtcgatattgaaaacagaaaaggatcttaagagaccaagctccttagttactgatccgtggatcagatggttt  4018500                                     --------->O2                                     <---------bZIP60(2)                                     <---------TGA1a                                     --------->TGA1a                                     <---------O2                                     <---------ANAC58                                     <---------ANAC46                            ------>NtERF2                            <---------RAP2.3(1)                           <---------RAP2.3(3)                           <---------ANAC46                           <---------DEAR3(1)                          --------->RAP2.6(3)                         --------->MYB52(1)                                                       <--                        ----------->TGA1                                                       ------      --------->CCA1(2) ----------->HVH21                                         ------>MYB46(1)<--- <---------YAB1       --------->At4g35610                           =================================HOX2a_HOX2a ==================HOX2a_HOX2a       <---------ANAC58               <------ZmHOX2a(1)        <------- -->GT1     <------ZmHOX2a(1)<------NtERF2                        <---------TOE2(3)          -------- ------ANAC58         <---------At4g35610                         <---------TOE1(3)<---------ATHB12 ------ANAC58  --------->ATHB12     <-----------------------TaNAC69(2)            ------>MYB83<------ZmHOX2a(2)   cttatgagagatgaggaagattggagatgacggcgagagacgtggaaagatggagaagacaagggtttaaggaattttgaaaccaatcgacgagagatca  4018600        ------>NtERF2                                       --------->ATHB51       <---------DEAR3(1)                         <---------TOE2(3)       --------->DEAR3(1)                         <---------TOE1(3)      <------NtERF2                         <---------AHL20(2)      --------->ATERF1(1)                   --------->AHL20(2)     <---------ATERF1(1)                   <---------AHL20(1)       <------------CBF     <-----------HVH21                     --------->AHL20(2)    ------------>CBF    <---------DEAR3(1)                *TSS <---------AHL20(2)<------------CBF -------ICU4                         --------->ANAC55(2)    <---------ICU4 --->YAB1<------NtERF2               --------->ANAC46       --------->ATHB12                      --- ------YAB1                          --------->ANAC58       -------->ATHB1                      ----- --ARR11(3)        --------->AtLEC2  <---------ANAC55(2)   <---------YAB1                  <--------- ->ARR11(3) <---------ARR14(2)       --------->ANAC58    <---------------AGL15       <----------DOF2   tcatcgtcgtcgccgatttcgatgcagagaagaagctctacgtaattaatttagggtttctattattgccaattgttttgggctcatctttcactttcgg  4018700                                          <------ZmHOX2a(2)                               --------->MYB52(1)                               <---------DOF5.7(2)         <----------DOF2    --------->WOX13(1)        <---------WRKY12          --------->ARR14(2)                <---------ARR14(3)  <---------ATHB12            <---------WRKY38(1)       <---------ARR14(2)                <---------GLK1(2) --------->CBF                <---------WRKY45         <---------MYB52(1)                 --------->ARR14(3) ->NtERF2                  --------->ANAC58       <-----------GT1         --------->YAB1  <---------ARR11(3) -DOF2      --------->YAB1 --------->ANAC58    --------->YAB1            <---------YAB1   --------->ARR11(3)   cccaatccatcaaattatagcttctagccaagtcaacggtttagatcaattttaaccggttctttggtttagactatcatcgatactaacaagattttgg  4018800                                                                                               <-----                                            <---------GLK1(1)                           ---------->DOF2                                            --------->GLK1(1)                        --------------->AGL15                                            <---------CCA1(2)                        <---------------AGL15                    <---------ICU4          <----------TaMYB80                      --------->ZAT6                   <---------YAB1          ---------->TaMYB80                   <---------ANAC58                 --------->YAB1            --------->ARR14(2)                   <---------ANAC46                <---------YAB1             <---------ARR14(2)                   <---------ANAC58    -         <-----------GT1  <----------DOF2 <---------CCA1(2)            ----------->RAV1(1)-----------   ctcatgaccatttacattatcatcatcgctctatgagattactcgtatatcccaatgcatagaactcgatgtgcaacaagtggcttactctaaagtgaat  4018900                  ------>MYB46(1)                  ------>MYB83                  -------->P          --------------->AtSPL8          --------------->AtSPL3      <---------YAB1      <---------AHL20(2)     <---------AHL20(1)     --------->AHL20(2) <---------ZAT18 -------CBF     <---------MYB59                                                                     - ----------->CBF--------->TOE1(2)   --------->ANAC46                                           ------ >GT1--------->AHL20(1) --------->ZAT18                   ---------->DOF2            ------>ZmHOX2a(1)   tgagcaatataatcggtacctacaagtgctcttaatccaagacaaaacaccaagttcccacaaagtttggagaaacacactctcttcctcatgcctattc  4019000                           <---------AHL20(2)     --------->ANAC58      --------->AHL20(2)        --------->ANAC58     <----------ID1    --------->AHL20(1)            --------->ANAC58     --------->ANAC58  --------->AHL20(2)            --------->ANAC46   ---------->DOF2     <---------AHL20(2)        <-----------GT1                                    < ----------->TBP    ------>MYB46(1)       --------->ANAC58                                          < -------->AHL20(2)  ------>MYB83          --------->ANAC58       <---------ARR11(3)          <------- ------>CBF     ------>NtERF2           ---------->DOF2     ------------>CBF            <<<<<<<<<TBF1   aatataaaagccaaatgccaccaaattttttaaataaactcatcaagcgattcacaagtcacaacaatgtcttcttcacttacaatcttcttcttctttt  4019100  Previous    Next  AGI:  At3g12650.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO15069.1) Range:  from: 4017837    to: 4018638    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12660.1    Description:  FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR). Identical to Fasciclin-like arabinogalactan protein 14 precursor (FLA14) [Arabidopsis Thaliana] (GB:Q9LTW9); similar to FLA10 (fasciclin-like arabinogalactan-protein 10) [Arabidopsis thaliana] (TAIR:AT3G60900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43945.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 4019067    to: 4019834    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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