Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------WRKY38(1)                                                   <<<<<<<<<<WRKY43                                                   <<<<<<<<<<WRKY38                                                   <<<<<<<<<<WRKY26                                                 ----------->GT1                                             --------->ATHB12                                            <---------YAB1                      <---------YAB1                                          --------------->AGL15              <---------AHL20(2)                                          <---------------AGL15             --------->AHL20(2)                                          --------->YAB1                  ------->TEIL                   <---------SPL7        <-----------------AGL1        <---------ATHB12                 --------------->AtSPL3  <-----------------AGL3  <---------ARR11(3)               <--               <-----------GT1   ------->TEIL--------->ATHB51    --------->GLK1(2)     --------->GLK1(2)          --------->YAB1   <-------TEIL  <-----------------AGL2  <-----------ARR10    <---------GLK1(2)   ttcagacatgaattatactaccgtacaaattcatgtatgtgctactataattggtcaattcatacagtatctaatgaattttatgctagaatctaaaata  4004100                                        <---------WOX13(1)                                      --------->ATHB12                                   <-------GAMYB                                  ----------->GT1                           <---------REM1(1)                        <---------TOE2(3)                        <---------TOE1(3)                  <---------AHL20(2)<---------MYB52(1)         <---------ANAC58                   ---                  --------->AHL20(2)<--------P                 <---------ANAC46                   ---         --------->MYB52(1)--------->ALFIN1---------->DOF2     <---------ANAC58      <---------ZAT6 -------ZAT6  ----------->GT1     <---------MYB46(3)  <---------ANAC46           <---------ZAT14  <--   ctgttcgactgtaacggtgttaaattaaggtgtaagcggttgattgaaagttaatggctcggatggcatgttagcccatagactatagagtaagagtagt  4004200                                                                           <-------GAMYB                                                                          <---------MYB46(3)                                                                          --------->MYB111(2)         --------->TOE2(3)                                                --------->MYB111(1)        ----------->GT1                                           <---------YAB1       <---------TOE2(3)                               --------->LBD16    --------->MYB55(2)       <---------TOE1(3)                           <---------ARR14(2)   <---------ANAC58      --------->MYB52(1)                           --------->ARR14(2)   <---------ANAC58      <---------DOF5.7(2)                         <---------GLK1(1)    <------MYB46(1)   <---------At4g35610                            --------->GLK1(1)    <---------MYB46(3)   --------->At4g35610             ---------->DOF2--------->RVE1(1)--------->ATHB12 ------>ZAT2        --------->ARR11(3)     <---------At4g35610    <---------TOE1(3) ------>At4g35610   --------->GLK1(2)      --------->At4g35610    <---------TOE2(3)     <---------ANAC55(2) -------At4g35610   <---------ARR11(3)  <-------TEIL  --------->ANAC46 <------MYB83 ------->TEIL   agctgagctaacgtaaatacaaaatctttggagaatagaaagttcatctcaaatatccgaaactcgttaagattggttgttagatgtatcacttgaaatg  4004300                                                   <---------PCF2                                                   --------->PCF2                                                   <---------PCF5                                                   --------->PCF5                                                   --------->TCP20                                                   --------->TCP11(2)                                                   --------->TCP16(1)                                            ---------->DOF2                                           <---------AHL20(2)                                        --------->YAB1                                   --------->MYB46(3)     ---------->DOF2                                  ------->TEIL     --------->TCP15(1)                               --------->ANAC46   <---------TCP16(2)                               <---------MYB52(2) <---------TCP23                               --------->ANAC58   <---------TCP15(2)                      <---------ARR11(3)                               --------->ANAC58  <---------ZAT18       ==============================                          --------->At4g35610   --------->ALFIN1       ---------->DOF2    --------->ARR11(3)     --------->AHL20(2)   <---------At4g35610--------->DAG2   ----------->GT1   <---------PCF2   cctaaaaaaaaatgtttgagtcttgataagctcacgaaccaatattaaaagtgggcccattaaaccgaaaaacaaaagaatgggcccaataagatgtccc  4004400       ----------->HVH21      ------->MYC3      <-------MYC2      ------->MYC2      <-------PIF5      <-----------HVH21      <-------MYC3      ------->PIF5     <---------TGA1a     <---------O2     --------->ANAC46     --------->bZIP60(2)     --------->TGA1a     --------->ANAC55(2)              --------->ANAC58     --------->O2                     --------->ANAC58                                        -------     <---------ANAC55(2)        <-------TEIL                                            --------->YAB1     --------->ANAC58          <---------MYB52(1)           ------------>CBF            <---------ICU4     --------->ANAC58       ------>ZmHOX2a(2)              --------->ANAC46            <---------YAB1   <---------ALFIN1         ==================================HOX2a_HOX2a           --------->AHL20(2)  --------->TOE2(2)        <------ZmHOX2a(2)             <-----------------AGL1     <---------AHL20(1)  =============MYC_MYB     ===================================HOX2a_HOX2a           <---------AHL20(2)  ------->GAMYB           <---------ARR14(2)           ------>ZmHOX2a(1)            --------->AHL20(1) ==============bZIP_DOF   --------->ARR14(2)   <---------MYB52(1)          ---------->DOF2 <---------   ataacccacgtgacatgctgactgtgccgatccgttcatcacgctcacggtttgctccttcccccaatggcccgaataaaagaaaatttattattacatt  4004500                                       --------->MYB46(3)                                      --------->ANAC58                                      --------->ANAC58                                     ------->GAMYB                                    <---------MYB111(1)                                    --------->MYB46(3)                                    <---------MYB55(2)                                    <---------MYB111(2)                                  ------>MYB46(1)                                <---------MYB55(2)                                --------->MYB46(3)                               --------->ANAC58                               --------->ANAC58                               --------->ANAC46                              ------>MYB46(1)                              ------>MYB83                      ------->TEIL                             <---------ALFIN1                   --------->ARR14(2)                            <---------MYB55(2)                  <---------ARR14(2)                            --------->MYB46(3)            <---------ARR14(2)                          --------->PCF2                  --------->GLK1(2)    ---------->ID1       <---------WRKY18(1)     --------->AHL20(2)              ------>ZmHOX2a(1)   <-----------GT1 <----------DOF2------>MYB83   <---------AHL20(2)      <----------DOF2 -------------->WRI1    --------->WRKY38(1)  --------->AHL20(2)<---------CCA1(2)--------->TOE2(3) --GT1             *TSS --------->WRKY12------->GAMYB     --------->ARR14(2)   ------>ZmHOX2a(2)   ttgtttttcgtcttctctgttctttgttgacccacccaacaaccaaaaaaaataaatacaaatctgtatctgcgtctttgatcctaaatagctatagaca  4004600                              <------NtERF2                            <---------ATERF1(2)                            --------->RAP2.3(2)                            --------->RAP2.3(3)                            --------->ATERF1(2)                          --------->ZAT2                <------ZmHOX2a(2)               <-----------ARR10               --------->ARR11(3)               <---------ARR11(3)<---------At4g35610                       --------->ANAC46               --------->AGP1<-----------HVH21                             --------->ANAC58               <---------AGP1<---------RAP2.6(3)                           --------->ANAC58              <---------CCA1(2)  --------->At4g35610                      --------->WOX13(1)       <---------ALFIN1   <---------ZAT2  --------->ATHB12        <---------MYB52(1)   --------->ANAC58     <-----------RAV1(2)  ------>ZmHOX2a(2)   <-------GAMYB                    <--   --------->ANAC46   ------->GAMYB     <---------WOX13(1) --------->HSFC1(1)                     ---   --------->ANAC58 -------->P<---------MYB52(1)           <---------HSFB2a(2)                 ------ <---------ALFIN1------>ZmHOX2a(2) <------ZmHOX2a(2)       --------->HSFB2a(2)        <---------ZAT6   gacacacccaaaccctagatctaaccccagccgtcagatcagattgatcgggcaatcgcttctagaccgttggaatcaagcaatggtagaggtagaatcg  4004700                                                                                            <--------                                                                                           <---------ARR11(3)                           >>>>>>>>>ARR2                                                   --------->AHL20(1)                           >>>>>>>>>ARR2                                         ------>ZmHOX2a(1)                           >>>>>>>>>ARR1                                    --------->GLK1(1)                         <---------YAB1                                     --------->HSFB2a(1)           <---------HSFB2a(2)                                             ------->TEIL---------->DOF2           --------->HSFB2a(2)                                             <---------ARR14(2)        <---------ARR14(2) >>>>>>>>>ARR1                                   --------->ARR14(2)        --------->ARR14(2)<------ZmHOX2a(1)                                <---------ARR11(1)   <---------ANAC46   <---------MYB52(1)          <-----------GT1         <---------CCA1(2)<---------AHL20(1) -------ARR14(2)    <---------ANAC58      <---------ANAC46                <---------ARR14(1)<-------- ------>ARR14(2)    <---------ANAC58  --------->ZAT2                      <---------GLK1(2)--------->ARR11(3) --->YAB1  <---------HSFC1(1)         <---------ZAT2               <---------MYB52(2)  ==============   tatttgtgggtatctagaagaggcgttaggattgtctccaagctgggtgttttttcatcttgatggccaactaatcgaatctcctactctaaagatattt  4004800                                                                                 --------->LBD16                                                                                <---------ANAC46                                                                               <------NtERF2                                                                               <---------LBD16                                                                               --------->ATERF1(1)                                                                              ------>NtERF2                        <-----------HVH21                                     <---------RAP2.3(1)                       <------MYB46(1)                  <---------TOE1(1)    <---------DEAR3(1)                       <------MYB83                     <---------TOE2(1)  <-----------HVH21                      --------->MYB59<-----------HVH21 --------->SPL7     --------->TGA1a                      <---------AtMYB61              <---------SPL7       --------->O2             <---------TGA1a     --------->SPL7   --------->At4g35610     ===========================             --------->TGA1a <---------TOE1(2) <---------At4g35610        <---------TGA1a             <---------O2    --------->LBD16   <---------ZAT2             <---------O2 -CCA1(1)    --------->O2   <---------ANAC46   --------->ZAT2        --------->O2------>NtERF2 -RVE1(1)<-----------HVH21 <------NtERF2<---------ATERF1(1) <------ZmHOX2a(1)--------->DEAR3(1) <---- ======================bZIP_DOF<---------SPL7  --------->At4g35610   --------->TGA1a     <---------MYB52(1)   ttgtttatttctgtcatgtgtgatttggtcgcgcgtacgggtcgtctccagcagcggtacgaggatggctctcgtctcgtcgccgggtaccgttttttta  4004900                                                          <---------ANAC46                    <---------AHL20(2)                   <---------TOE2(3)                    --------->AHL20(2)                  <---------TGA2(2)                    <---------YAB1                     ----------->HVH21                 <----------DOF2                       ----------->TGA1               ---------->ID1                        <---------ZAT2             --------->GLK1(2)           <----------DOF2                           --------->ZAT2   --------->ANAC55(2)       ---------->ID1                                <---------At4g35610       <---------CCA1(2) =====================bZIP_DOF                       --------->At4g35610   ----------->GT1<----------DOF2 -------GT1<---------DAG2 <---------YAB1       <----------DOF2 <---------AtMYB61------->TEIL   tccatccttgttcctttttctttttattatgtctgcgtttgtatcgcctctttgaagctgacgttttggtttatgtaatgtgaatctttctcctttattc  4005000  Previous    Next  AGI:  At3g12600.1    Description:  ATNUDT16 (Arabidopsis thaliana Nudix hydrolase homolog 16); hydrolase. Identical to Nudix hydrolase 16, mitochondrial precursor (NUDT16) [Arabidopsis Thaliana] (GB:Q9LHK1); similar to ATNUDT12 (Arabidopsis thaliana Nudix hydrolase homolog 12), hydrolase [Arabidopsis thaliana] (TAIR:AT1G12880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42807.1); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 4004519    to: 4006205    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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