Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------At4g35610                   --------->ANAC46                  --------->SPL7               <---------ANAC58                                                                  ----      <---------MYB52(2)      --------->At4g35610                                                <---     --------->At4g35610   <---------ANAC58                                                     <----     <---------ZAT2--------->ANAC58                                                             -----     <---------At4g35610   <---------ANAC58                                                --------->YAB1     --------->ZAT2--------->ANAC58       --------->YAB1 --------->HSFB2a(2)           --------->MYB46(3) --MYB46(3)    <---------ANAC58        --------->WOX13(1)<---------HSFB2a(2)        <----------ID1   gaagcccagctaaccttgcatacgacattgcctgctcaaatccatcaaaacagaagtttttagaaactaaactcacttaaacaagaagaacaaacatact  3971500         ------>ZmHOX2a(1)    <---------GLK1(1)                ----------->GT1   <---------ZAT6               <---------HSFB2a(2)                      --------->YAB1             - ----->ATHB12                --------->ZAT6                           --------->WOX13(1)            < ------ICU4               <---------CCA1(2)                         <---------ATHB12              <-- -----------AGL15      <---------At4g35610      <---------LBD16   --------->WOX13(1)             <--- ---------->AGL15     <---------TOE1(3)        <---------LBD16   --------->MYB46(3)              ----   cattagagttcctgtgattcacttaagcttatctctagatggtataaattcagggaagatagaatcaacaatcaatcggaaatgaagaaacagaaaatga  3971600            <---------YAB1      ------>MYB46(1)                     <--------P              ---------          --------->YAB1        ------>MYB83                       <---------MYB52(1)      --------->ANAC58        --------->ANAC58       --------->ANAC58                ------>NtERF2 --------->ARR14(2)        --------->ANAC58       --------->ANAC58              ----------->HVH21             --------->ANAC58 -------->LBD16                --------->ANAC46         --------->ICU4       --------->GLK1(2) ---------LBD16        --------->At5g28300       ---------->DOF2<------NtERF2<---------ARR14(2) -------LBD16         ----------->GT1          <----------DOF2 --------->MYB52(1)      --------->ANAC58 ------bZIP60(2)     <---------DEAR3(1)  <------ZmHOX2a(2) --------->bZIP60(1)         --------->ANAC58 ------->RAV1(2) --------->DEAR3(2)     --------->ARR11(3) <---------bZIP60(1)   ---------->DOF2   cctggggaacaagcatgataccgacggtgataccagccataagatcgagcttaaagtactgatgccaccggtaagtccgaatccaaaggaagcaaggaaa  3971700                                             --------->SPL7     <---------YAB1              <--------                                    ------>ZmHOX2a(2)          --------->TOE2(3)           <------ZmHOX2a(2)                                  --------->ARR11(3)          --------->ATHB12            <---------ARR14(2)                                  <---------ARR11(3)          <---------ICU4              --------->ARR14(2)                      <-----------HVH21    ------>NtERF2      --------->YAB1   ----------->HVH21                     --------->ANAC58      --------->ORA47(1)--------->ICU4  <---------ANAC58     ---      --------->WOX13(1)       <----------DOF2     --------->LBD16---------->DOF2        <------ZmHOX2a(1) -->GT1              --------->ANAC58     --------->DEAR3(1) <---------ATHB12<---------ANAC58 -------   tattgcatcaatccagtcgaagaacgtcatgcgcttgatcttcgccgtccatcgggagaagaaatcattaaagggaatggagtgacagtgaggatcagaa  3971800                                                                                     <---------ANAC46                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                  <---------DEAR3(1)                                      <---------ARR14(2)                         --------->RAP2.6(3)                                      <---------GLK1(2)                        ----------->HVH21                                      --------->ARR14(2)                       --------->WRKY12                                    --------->LBD16                         ------>ZmHOX2a(2)                                  <---------LBD16                         <---------ARR11(3)                                <---------WRKY18(1)                       --------->ARR14(2)                             ------>ZmHOX2a(2)                            --------->ARR11(3)                           <---------ARR11(3)                            --------->GLK1(1)                           --------->ARR11(3)                            <---------GLK1(1)                          --------->YAB1                                ----------->ARR10           --------->ARR14(2)<---------ICU4                     <---------DEAR3(1)<---------RAP2.3(3)       <---------LBD16   --------->KAN4(1)                      --------->ALFIN1<---------WRKY18(1)    <---------ARR14(2)   <---------KAN4(1)               <------ZmHOX2a(1)<---------ARR14(2) --------->ALFIN1       <---------KAN4(2)                =========================HOX2a_HOX2a ---RAV1(2)<---------ARR14(2)===================================HOX2a_HOX2a<------ZmHOX2a(2) ------>ALFIN1        <------ZmHOX2a(1)                  ==========================HOX2a_HOX2a -->At4g35610         ==============HOX2a_HOX2a --------->At4g35610--------->ALFIN1<---------RAP2.3(1)   gaggtggaatcgggatactggagaggaatgatcttgaccggaatcgccttagatgaagaggatgaagcggtggagagatccttgacggcgagggacatcg  3971900                                                                                    -----------------                                                                                    <----------------                                           ------->TEIL                       <---------ZAT14                                        --------->ANAC55(2)                   --------->ZAT14                                   ---------->DOF2<------------CBF           <---------ANAC58                                  *TSS  <---------ANAC55(2)                  <---------ANAC46 <---------AtMYB61       <---------WRKY38(1)     --------->ATHB12            <---------ANAC58   gaattggtgggatagagaagaatgtgatcaacgtgaagaaagacgtatcactgattgtagcatgaagaaacagagcatagcgtagtgccagtttgggatg  3972000                                                         <---------ANAC55(1)                                                         <---------ANAC55(2)                       --------->YAB1               --------->ATHB12                  <-------TEIL                     <---------YAB1       <---------ICU4               --------->At4g35610             --------->YAB1           --------->YAB1               <---------At4g35610        <---------YAB1 <---------ANAC46           <---------MYB52(1)               --------->ZAT2            --------->TOE2(3)           --------->WOX13(1)          <---               <------NtERF2            <--------HAHB4   <---------ANAC58          <-------GAMYB <---               <---------ZAT2           <---------ICU4   --------->ANAC55(2)      <---------ANAC46        --------->CCA1(2)              <---------YAB1    <---------ANAC58         <---------ANAC58   <------ZmHOX2a(1)  <-------TEIL--------->YAB1 <---------CCA1(2)  <---------AHL20(2)        <------ >AGL1 <---------ARR14(2)    <---------DAG2    <---------ICU4       --------->AHL20(2)      <-------- -AGL2 --------->ARR14(2)    <----------DOF2--------->YAB1      --------->ICU4    <---------ANAC58 --   gataaggacgatatggcagctacattcataactttatcttgatcattaatcatatcattgcgtgtcttaattaatcagtatgtttcgttgattactgtta  3972100                                                 <---------TOE2(3)                                                <-----------RAV1(2)                                            --------->ATHB12                                           <---------YAB1                                      ------>ZmHOX2a(1)                                  <---------ARR14(2)                                  --------->ARR11(3)         >>>>>>>>>WRKY18          --------->ARR14(2)                                     --------->YAB1 ------ANAC55(2)                  <---------ARR11(3)                              <--------HAHB4 ------ANAC46    --------->ZAT6  --------->CCA1(1)            <----------DOF2     <---------ICU4 ---MYB52(1)     --------------->AtSPL3    --------->ICU4<---------ICU4           --------->YAB1 -ZAT6   <---------WRKY18(1)     --------->RVE1(1)   <-------TEIL                <---------ATHB12 ------->YAB1    --------------->AtSPL8  --------->YAB1 <---------YAB1         --------->WOX13(1) <--   agtataagccttgacttgaacagtaccatctctaaatatcctgtcatgattcaggttcatcattctttcagttttaaaattcaatcatttttcatactta  3972200               --------->ZAT2                     <---------ZAT18               --------->STY1(2)            <----------DOF2               <---------ZAT2              <---------DAG2          <-----------GT1               <-----------GT1  ----------->GT1 <---------ANAC55(2)---------      --------->TOE2(3)          <---------TOE1(2)--------->ZAT14 <---------ANAC58          <-------- -------GLK1(2)<---------STY1(2) <---------TOE2(2)--------->ZAT18 <---------ANAC58        --------->ZAT14   gattgtcacattaaactagctggtttatgagttcgtatgtttcaaccttttgtgctctccagtaaattgtgtatcacataaaaaaaaaacactgagctca  3972300                                                                ----------->HVH21                                                            <---------ANAC46                                                            <---------ANAC58                                                            <---------ANAC58                                                          ------>ZmHOX2a(1)                                                        <---------HSFB2a(1)                                                        ------>ZmHOX2a(2)                                                        --------->HSFB2a(1)                                                        --------->HSFC1(2)        --------->ALFIN1   ----------->RAV1(1)          <---------HSFC1(2)  --------->HSFB2a(2)     <---------ZAT18              <------ZmHOX2a(2)  <---------HSFB2a(2)   <---------At4g35610           --------->ARR14(2) >At4g35610             --------->At4g35610           <---------ARR14(2)        ---------->DOF2 ----- -At4g35610     ------>ZmHOX2a(2)                     --------->ARR11(3) <-----------GT1        -----   ttttgcagaagtgtttgatcgatttcagcccacatacttgaaatgaaaacatatgggatccttcgtgtgaccatttcacccataaaactcgtttgccatc  3972400  Previous    Next  AGI:  At3g12520.1    Description:  SULTR4;2 (sulfate transporter 4;2); sulfate transmembrane transporter. Identical to Probable sulfate transporter 4.2 (SULTR4;2) [Arabidopsis Thaliana] (GB:Q8GYH8;GB:Q9LHF7); similar to SULTR4,1 (Sulfate transporter 4.1), sulfate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G13550.1); similar to sulfate transporter [Brassica napus] (GB:CAC94921.1); similar to At3g12520-like protein [Boechera stricta] (GB:ABB89769.1); similar to sulfate transporter [Brassica oleracea var. acephala] (GB:CAD87011.2); contains InterPro domain Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645); contains InterPro domain Sulphate Range:  from: 3967823    to: 3971934    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12530.1    Description:  PSF2. Identical to DNA replication complex GINS protein PSF2 [Arabidopsis Thaliana] (GB:Q9C7A8;GB:Q5EAG9;GB:Q9LHF6); similar to At3g12530-like protein [Boechera stricta] (GB:ABB89770.1); contains InterPro domain GINS complex, Psf2 component; (InterPro:IPR007257); contains InterPro domain GINS complex, PSF2 component, subgroup (InterPro:IPR016906) Range:  from: 3972353    to: 3974202    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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