Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                <---------MYB59                                                          <---------YAB1               <---------ANAC58                                                         --------->TOE2(3)            <---------WOX13(1)                 --------->ARR11(3)                      <---------ICU4          --------->ATHB12         <------ZmHOX2a(1)                                   <--------HAHB4         <---------YAB1      ------->TEIL      <---------ARR11(3)            ---------->DOF2 -------->RAV1(1)    --------->TOE2(3)       ----------->ARR10  <---------REM1(1)     <---------YAB1 ----->REM1(1) <---------ANAC58  <---------TOE2(3)            <---------ANAC46--------->DAG2   caacattgactatgattgcctaacattaatgcatttaggaagtagaatagatattcagtttttttggtgtaactacagaaaaagtttgatcattaaaggc  3966700                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                             <------ZmHOX2a(2)                                                            <---------ARR11(3)                                                           --------->GLK1(1)                                <---------YAB1             <---------GLK1(1)                       <-                                <------ZmHOX2a(2)        <------NtERF2                        <XXXXXX    <---------GLK1(1)          --------->ARR11(3)       <------NtERF2 ----------->GT1    <-----------   <---------ARR14(2)          <---------ARR11(3)       --------->LBD16            --------->AHL20(2)   --------->ARR14(2)    <---------REM1(1)             <---------ANAC46            <---------AHL20(2) >DOF2              ---------->DOF2                   <---------LBD16----------->GT1<---------AHL20(2)   tattggatttgccccaaaaaaaaaaagatgtaagatcattaagcctattggattgggccggagatcagaagatgttaaaatcagattaattttgttttgt  3966800                                                                     <---------ICU4                                                                     <--------ATHB1                                                                     --------->ATHB51                                                                     --------->YAB1                                                                     <--------HAHB4                                                                     -------->HAHB4                                                                    --------->ICU4                                                                    <---------ATHB51                                                                    <---------YAB1                                                                    --------->AHL20(2)                                                                  --------->YAB1                                                                 <---------YAB1                                                                <---------AHL20(2)                                                                --------->AHL20(1)                                                                --------->AHL20(2)                                                               --------->YAB1                      --                                                           <---------YAB1                <---------CCA1(2)                       <------ZmHOX2a(2)                  <---------AHL20(2)           ------>ZmHOX2a(2)                      <---------ARR14(2)                  --------->AHL20(2)         <---------ARR11(3)                      --------->ARR14(2)                 --------->YAB1 --------->AHL20(1)   --------         <-----------GT1                                 --------->AHL20(2)          --------->ARR11(3) ---------->ID1    <---------HSFB2a(2)               --------->AHL20(2) <---------AHL20(1)   <------- ----------RAV1(1) --------->HSFB2a(2)               <---------AHL20(2) --------->AHL20(2)  --------- XXXXXXXXXXXXXXMIR863-3P------>ZmHOX2a(2)           --------->AHL20(2)  <---------AHL20(2)  --------- -------------ANAC81  <---------ARR11(3) <---------ANAC46<---------AHL20(2)     <-----------GT1   ---   tttgttgcatttaacaaaattccagatcgtttcgaacttggttttgggtaaacatttaattaaaattataataattaattagttactgatcttatcttaa  3966900                                                                                           --------->ALFIN1                                                                                          ------->PIF5                                                                                          <-------MYC2                                                                                          ------->MYC4                                                                                          ------->MYC3                                                                                          <-------MYC3                                                                                          <-------PIF5                                                                                          <-------MYC4                                                                                          ------->MYC2                                                                                         --------->TGA1a                                                                                         <---------TGA1a                                                                                         --------->O2                                                                                         --------->ANAC46     <---------ARR11(3)                                   <---------ANAC58            <---------REM1(2)     --------->ARR11(3)                                   <---------ANAC58      <---------ALFIN1 ------->DAG2                                     <---------WOX13(1)            ------------------>SPL14 ------->AGL15          ----------->GT1        <---------AHL20(2)     --------->At4g35610<---------O2 --------AGL15         <---------TOE2(3)   <---------RVE1(1)      --------->ANAC46  --------->ZAT14 >TOE2(3) <<<<<<<<<GT-1----------->GT1    --------->ARR11(3)      --------->ANAC58  <---------SPL7 >YAB1    <-----------GT1       ----------->GT1<---------YAB1     --------->ANAC58--------->ANAC46 ------->DOF2        ---------->DOF2      <---------GLK1(2)  <-------TEIL   --------->At4g35610   ---   taaagtagatattaaccaatttgtaaaggaaaattggtaattcagatttttaattgaattgggttcacacgcagcatcatctccaccgtacacgtggatg  3967000                                                      --------->bZIP60(1)                                                      <---------bZIP60(2)                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------TGA2(1)                                                      --------->ANAC55(2)                                                      ===============bZIP_DOF                                                      --------->O2                                                      <---------O2                                                      --------->TGA1a                                                      --------->TGA2(1)                                                      <---------TGA1a                                                      <---------bZIP60(1)                                                      <---------ANAC58                                                     ----------->STF1                                                    <---------TGA2(2)                                                   ----------->HVH21                                                   ----------->TGA1                                                 --------->MYB52(2)                                               <---------MYB52(1)                                               =================MYC_MYB                                               <--------P                                              <-------GAMYB                                             <---------DEAR3(2)                        <---------AHL20(2)                                             <------MYB46(1)                           --------->AHL20(1)                                             <------MYB83 <----------DOF2              --------->AHL20(2)    <------ZmHOX2a(1)                        <---------MYB46(3)                       --------->AHL20(2) ---->TEIL                     <-----------GT1==================MYC_MYB        ----------->TBP      -   aatcaaggaccatcgtcgattttcgatgggttttttccgcttggagtcggttagtgacgtctttaagaagagaagaagcttataaaaaaaaaattaagaa  3967100                                     <---------GLK1(2)                         --------->REM1(1)                     ----------->GT1<---------HSFB2a(1)                    --------------->AtSPL3                    --------------->AtSPL8           --------->MYB52(1)                    <---------------AtSPL8        ---------->DOF2  *TSS  --------->YAB1  --------->SPL7--------->GLK1(2) ---------->GT1   --------->MYB52(1)--------->HSFB2a(1)   cagtgtgaaatcaaaattcgaaacggtacaacaatgggagattctaagaggcaaaagacggagacggagacgaagatggagatggagaaggtagagaaga  3967200               <---------MYB52(1)                       --------->At4g35610             ----------->GT1                      ---------->DOF2            ------>ZmHOX2a(2)            ------>ZmHOX2a(2)            ------>ZmHOX2a(2)                  <------ZmHOX2a(2)           <------ZmHOX2a(2)            <------ZmHOX2a(2)                  <---------ARR14(3)          --------->ARR11(3)           <---------ARR11(3)                  --------->ARR11(3)          --------->ARR14(2)           --------->ARR11(3)   <---------ARR14(2) --------->ANAC46          --------->GLK1(2)       ----------->HVH21  <---------ZAT2        --------->ARR14(2)          <---------ARR11(3)    --------->ANAC58 --------->ANAC46          <---------ARR11(3)          <---------ARR14(2)    --------->ANAC58--------->LBD16            <---------ARR14(2)          <---------AGP1        --------->ANAC46<---------HSFB2a(2)       <---------HSFB2a(1)         <------ZmHOX2a(1)      <---------ANAC55(2)  --------->ZAT2       --------->HSFC1(2)      <-----------RAV1(2)  <---------ARR14(2)   --------->HSFB2a(2)       --------->HSFB2a(1) --------->ANAC58          --------->ARR14(2)  <---------ANAC46        --------->LBD16      --------- --------->ANAC58          <-----------ARR10  <---------LBD16     ---------->ARF1    --------->AtMYB61   aggaagcatcaggatctgttaatttcgcagaactacgcgacgatctcttccgcgaagcagcgaaacttgtctccgaagatccctccaccaaaatcgccat  3967300                                 <---------O2                                 <---------TGA1a                                 --------->TGA1a                                 ================================================MYC_MYB        -----                                 --------->O2                                                   <----               ------>ZmHOX2a(1) =================================bZIP_DOF          <----------DOF2            ------>ZmHOX2a(1)   --------->SPL7                  <-----------HVH21--------->ZAT6<-----           <---------ALFIN1--------->GLK1(2)           --------->GLK1(1) <-------GAMYB        -------         ------>ZmHOX2a(1) --------->ARR14(2)          <---------GLK1(1)<---------ANAC58   <---------HSFB2a(2)  <---------MYB52(1)  ------>ZmHOX2a(1)                <----------DOF2  <---------ANAC46   --------->HSFB2a(2) -------------->TaNAC69(2) <---------ARR14(2)    ------>ZmHOX2a(1)      <---------ANAC58 ------>ZmHOX2a(1)   cttcgttactcctcctccttcttcctccgaatcggacgtctctatgttctccttcggctttccctctgtcaatggcgttgttaacactttcctcgagaat  3967400                                                              --------->ANAC58                                                              --------->ANAC58                                                           <---------At4g35610                                                       --------->ALFIN1                                                      <-------GAMYB                                                     <---------MYB46(3)                 --------->ANAC58                                                    <---------AtMYB61                   --------->ANAC46                                                  --------->LBD16                       --------->ANAC58                           <------ZmHOX2a(1)    <---------LBD16--------->MYB46(3) --------->ARR14(2)                      --------->ALFIN1        --------->ARR14(2)                  --------->ARR11(3)     ----------->RAV1(1)<------ZmHOX2a(1)     <---------ARR14(2)                  <---------ARR14(2) ---->KAN4(1)       --------->LBD16          <------ZmHOX2a(1)--------->ANAC46    <---------ARR11(3) -----KAN4(1)      <---------ANAC46       <------ZmHOX2a(1)--------->At4g35610  ----------->ARR10 ----KAN4(2)      <---------LBD16       --------->ALFIN1   <---------ZAT18 <---------ANAC46 -->YAB1   <---------MYB46(3) --------->At4g35610<---------ANAC46       <---------AtMYB61   aatccagcaccagtggatgatgcggaggaggaagatgaagacgaggaggatgcggaggttgagcacccaaggttttggtgggaagatactaagcaattcg  3967500                                                                                                    <                                        --------->At4g35610                                         -                                      <---------ARR14(2)                                            <                                     <------ZmHOX2a(1)                                              -                                  <---------At4g35610                                    <---------At4g35610                                <-----------RAV1(2)                               --------->At4g35610                              <-----------HVH21                             --------->ANAC58     ----                           <---------ANAC46                       <---------HSFB2a(2) ---------->DOF2                           <---------ANAC58             <---------HSFB2a(1) --------->ANAC46   ------          --------->LBD16  <---------ANAC58             --------->HSFB2a(1) --------->ANAC58   <-----      ------->TEIL        ------>NtERF2 <---------At4g35610    ------->TEIL---------->ID1--------->At4g35610   aatcgatgaatccagagcaattgaacgctgcgtgtcagaggatgctgaggctgaaggaacgtttgaatctcgaacttgacgctatgctgaaagctgaagc  3967600  Previous    Next  AGI:  At3g12510.1    Description:  similar to At3g12510-like protein [Boechera stricta] (GB:ABB89768.1); contains domain PTHR11945 (PTHR11945); contains domain PTHR11945:SF13 (PTHR11945:SF13) Range:  from: 3967102    to: 3967829    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version