Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------ATERF1(1)                                                                 ------>NtERF2                                                                ----------->HVH21                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                <--                                                               <------NtERF2                      ---                                                               --------->ORA47(2)                 <--                                                               --------->RAP2.3(1)               <---                                                              ------>NtERF2             --------->ALFIN1                                                              <---------ERF1           <------NtERF2<                                                              <---------RAP2.3(1)      --------->ATERF1(1)                                                              <---------ATERF1(1)    <---------ANAC46                                                              <---------ORA47(2)     <---------DEAR3(1)                                                              <---------DEAR4(2)     <---------DREB2C(2)                                                             <---------RAP2.3(3)    <---------ABI4(1)                                                             <---------RAP2.3(2)    <------NtERF2<---          <---------YAB1            <-------TEIL             <---------DEAR3(1) <---------O2     ---- <-----------HVH21     <---------ANAC58                      <---------RAP2.6(2)--------->O2   ------ --------->LBD16       <---------ANAC58                     --------->ATERF1(1)------>ZmHOX2a(1)<---- -------->ANAC46     <---------ANAC46                <------NtERF2      ------>ZmHOX2a(1)    <-------   ctccgtcaaattgttaatgagttttgggtacctgtagtttcatgggaagtctggccgaagaaggcggcgacctccttcttcctcgtggcggtgtctccgg  3963600          --------->LBD16         --------->TOE1(2)         <---------LBD16      <---------ARR14(2)      --------->ARR14(2)  ----------------->AGL1  <------NtERF2 ------>NtERF2 -------ATERF1(1) ------>ABI4(2)                        <---------ANAC58 -------MYB46(3)                       <---------ANAC58 ------DEAR3(1)              --------->At5g28300 ---------PCF2              ----------->GT1 ------AtMYB61             <---------DEAR3(1)                                 <---------ICU4 ----->ALFIN1       <----------DOF2   <-----------------------TaNAC69(2)  <------NtERF2         <---- --->LBD16<---------LBD16 <---------At4g35610                            --------->RAP2.6(2)  ------- -----MYB52(1)   <------ZmHOX2a(1)---------->DOF2                   ---------->DOF2   <---------YAB1 --LBD16<---------LBD16   --------->At4g35610                     <------ZmHOX2a(1) ------>ZmHOX2a(1)   tggtgccaaaaccggggaaggactttgcagcggtgataaaggcgttgtaagtgtagaaacctctagcaggacaagcggcatcattcctatgcttaagcat  3963700                                                  <------ZmHOX2a(1)                                               <-----------RAV1(2)                                               <---------LBD16                                               --------->HSFB2a(2)                                               <---------HSFB2a(2)                                            <---------PCF2                                          --------->MYB55(2)                                          --------->ABI4(2)                                          <---------MYB46(3)                                         --------->ALFIN1                                         <--------P                                         <---------MYB55(1)                                        <---------MYB52(1)                                       <---------DEAR3(2)                                      <---------ATERF1(2)                                      <---------DEAR3(1)             --------->ZAT18                                   ======================HOX2a_HOX2a <---------ZAT14                                   =========================HOX2a_HOX2a                                   ------>ZmHOX2a(2)                 <---------ZAT18                                  <------ZmHOX2a(2)            --------->LBD16                                  =======================HOX2a_HOX2a --------->ZAT14                                 <---------ARR11(3)          <---------LBD16                                 --------->ARR11(3)         --------->MYB52(1)                           --------->ANAC58 --------->TCP20<---------ALFIN1                           --------->ANAC58<------MYB83  --------->SPL7               <-----------RAV1(2)                           --------->ANAC46<------MYB46(1)--------->MYB46(3)        <------NtERF2                    <---------ATHB12 <---------LBD16 <------ZmHOX2a(1)      <---------ANAC58     ---- -----CCA1(2)       --------->ICU4==========================HOX2a_HOX2a     <---------ANAC58--------- -->YAB1   --------->ARR11(3)---------->DOF2--------->TCP15(1)<---------LBD16<----------DOF2<--------   atcatcgaactgagaacttgaaatgatgcccgaaagatcgccggtgggtccaggaggagtaccaccgggagtgcactggctttggcagccaggctgctta  3963800                       --------->At4g35610                       ------>MYB46(1)                     <---------ALFIN1                     ============================RAV                     <-----------RAV1(2)                     --------->MYB46(3)                   ----------->RAV1(1)                 <---------ZAT18                 --------->ZAT18        <---------ANAC46        <---------ANAC58        <---------ANAC58        <------MYB83 <---------MYB55(2)          --------->ALFIN1        <---------ANAC55(1)                     <---------MYB52(1)                                 --        <------MYB46(1)------>MYB83   <---------At4g35610                                       <----       <---------DEAR3(1)            ----------->RAV1(1)             --------->ZAT2          <------NtERF2       --------->MYB52(2)--------->RAP2.6(2)   <-------GAMYB     ------>ZmHOX2a(1)    <---------ANAC58 ----->ZAT6   <---------At5g28300  --------->ZAT14          --------->ZAT18    <---------ALFIN1 ----- >At4g35610  <-----------GT1       --------->At4g35610      <---------ZAT18 ------>NtERF2 ------>NtERF2 -At4g35610<-----------HVH21       <---------At4g35610  <------NtERF2<---------ZAT2   <---------ANAC58   cagtatggttcggtgttaccgcaccagccgaactcgctgcagcatagaccgttggggcagagtgctcctccagcttggcgaccacattgctcggccgagg  3963900       <------ZmHOX2a(1)  --------->YAB1                                                                             <-------  -------->HAHB4                                                         --------------->AGL15  --------->ATHB12                                                       <----------DOF2     -------- --------->ICU4                                                          <---------------AGL15  <---- <---------YAB1          ---------->DOF2                                ============================= ------->YAB1     --------->ICU4                                        <-----------------AGL3------- --ZmHOX2a(1)   ---------->DOF2  ---------->DOF2                       *TSS              ---------->DOF2 ---->YAB1 ----------->GT1   <----------ID1                      <---------TOE2(3)  <------NtERF2   ataatgataggagaagtgaaaagatgagaaagagaaaaagattagtcttcattttgttcaatgttctatggttttctttttgtggaggcatgaaagatat  3964000          --------->AHL20(2)          <---------AHL20(2)         <---------ATHB12     ------------>CBF     ----------------->AGL3    <------ZmHOX2a(2)   --------->AGP1 --ARR11(3)                                                                  --------->ALFIN1       - ->ARR11(3)     ------->TEIL                                               <---------ANAC58         < -------TBP  <---------YAB1                            <------------CBF    <---------ANAC46   ------- ======================MADS_MADS         <----------DOF2     <---------MYB46(3)             <-------- -->CCA1(2) <---------TOE2(3)     --------->GLK1(2)  <---------AHL20(2)    <---------ANAC58 ---------   atatagatccaattaatgaatgttttatcacatcaaattctatctttttccatagtttattgtttgttatgtctatggagtgtggctatggggaacaaac  3964100        <------MYB83        <------MYB46(1)       <---------TOE2(2)       <---------TOE1(2)       --------->MYB111(1)       --------->MYB59      <--------P                                     <------MYB83      <---------MYB55(1)                <-----------TGA1    <------MYB46(1)         <---------AHL20(2)       <------MYB46(1)    <------MYB83            --------->AHL20(2)    <---------ANAC58   --------->MYB59      <---------YAB1 --------->ANAC55(2)                                          - -------->ARR14(2)     <---------AHL20(1)    <-----------RAV1(1)--------->ATHB12         ----------->GT1 ---------ARR14(2)     <---------AHL20(2)   <---------YAB1 --------->ARR11(3)            <---------YAB1 -->MYB52(1)           --------->AHL20(1)<---------MYB52(1)<---------ARR11(3)          --------->YAB1 -MYB52(2)            --------->AHL20(2)--------->LBD16  ----------->ARR10   <---------LBD16        - >MYB46(3)        <---------YAB1<-----------GT1   <---------ANAC58    ---------->ID1  <---------YAB1-   agtatttggtaggtttgtttttgattatatttattttccttccgtcattgttgctaggttagatattgatttgtttttttgggggattatcatgttaatt  3964200            <----------DOF2           <---------HSFB2a(1)           --------->HSFB2a(1)           <---------HSFC1(2)           --------->HSFC1(2)         <---------ARR11(3)                                               --------->YAB1         --------->ARR11(3)                           --------------->AGL15      --------->YAB1                     <------MYB83 <---------------AGL15 -------->ANAC58                         <---------MYB46(3)           ---------->DOF2 -------->ANAC58                         <------MYB46(1)            --------->AtMYB61      <--------- -------->ANAC46         ------->TEIL<-----------RAV1(1)    <---------HSFB2a(2)     <-----------GT1   ccaagtaatgagaactttctatgtatgaaactgtgctaaatgttggtagaagaatacaaattttagaagaccaaaagcataacaaattacactctttttg  3964300                                                              <------MYB46(1)                                                              <------MYB83                 ------>NtERF2                                                             <---------AtMYB61            --------->ZAT18                                                            <XXXXXXXXXXXXXXXXXXXXMIR398B/C<---------ZAT18                        <---------ANAC46                    <XXXXXXXXXXXXXXXXXXXXMIR398A  --------->LBD16                     <---------ETT(2)                      <---------ANAC58              <---------ANAC46                 <---------YAB1                            <---------ANAC58<-------MYC3  <---------ANAC58               <-----------GT1                 ----------->GT1<---------MYB46(3)         <---------ANAC58           <---------TOE2(3)             ---------->DOF2   <---------ANAC46------->MYC3 <---------LBD16 -DOF2    ---------->DOF2           <---------PCF2        <---------MYB46(3)--------->DOF5.7(2)   agttttttgttctaaagttactatcgacgtagatagtgggacacaaaggtcgtaaaattttgggtggtctgaaaacacgtttactcgagttgcggactaa  3964400                                                          <---------ATHB12                                                  --------->KAN4(2)                                                 <---------HSFB2a(1)                                                 <----------TaMYB80                 <---------ZAT14                 --------->HSFB2a(1)                 <---------ZAT18                 <---------KAN4(1)                 --------->ZAT18                 --------->KAN4(1)                 --------->ZAT14                 --------->GLK1(1)               --------->ZAT18                   <---------GLK1(1)               <---------ZAT18                  ---------->TaMYB80              <---------ZAT6                    <-----------ARR10     ------>ZmHOX2a(2)                    --------->ARR14(2)              <---------ANAC55(2)   <----    --------->At4g35610   --------->WOX13(1)    --------->ARR14(2)        --------->ANAC55(2)  <-----   <---------ARR11(3)    <---------AHL20(2)     <---------ARR14(2)   --------->ANAC46          ------   --------->ARR11(3)    --------->AHL20(2) <---------LBD16        --------->ANAC46<---------ARR11(3)   <-----------ARR10 --------->ICU4       <---------ARR14(2) <---------ANAC46     <---------CCA1(2)   tcgatgatctgagctagtgtgcactaattaatcaaacacacacatattcggatattccctatgatgtatacacaatacttgactatatctaagacaagat  3964500  Previous    Next  AGI:  At3g12500.1    Description:  ATHCHIB (BASIC CHITINASE); chitinase. Identical to Basic endochitinase B precursor (CHI-B) [Arabidopsis Thaliana] (GB:P19171;GB:Q9S7J5;GB:Q9S838;GB:Q9SXJ2;GB:Q9SXJ3;GB:Q9SXJ4); similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT4G01700.1); similar to class I chitinase [Arabis fecunda] (GB:AAF69777.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002) Range:  from: 3962389    to: 3963971    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12502.1    Description:  other RNA Range:  from: 3963131    to: 3964229    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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