Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      ----------->GT1                --------->DAG2                                       <---------ZAT18               ---------->DOF2                                     --------->ANAC58          --------       --------->AHL20(2)                    <---------YAB1        --------->ANAC58         <--------   <---------HSFB2a(2)      <---------AHL20(2)                     --------->ANAC46     <----------DOF2   --------->HSFB2a(2)      --------->AHL20(2)         <----------DOF2   <----------DOF2<---------DAG2 --------GT1--------->AHL20(2)        ----------->RAV1(1)     <-------TEIL      <-----------GT1 ----- -->YAB1   --------->AHL20(2)        --------->ANAC46  --------------------->WRI1  <-----------GT1<--   aacttctgaaaaaataaaaaagttgtaaatataaattccacaacattttgtttggaactttggatacataggccactttgttttatcacactttataata  3957400                                                                                              <------                                                                                        --------->AHL20(2)  <---------MYB46(3)                            --------->GLK1(2)                 <---------DAG2    < --------->ALFIN1                    ----------->GT1                    <---------AHL20(2)   <------- ->YAB1                              <------MYB46(1)                    <---------ATHB12<---------AHL20(1) -YAB1    <---------MYB52(1)         <------MYB83                       <---------ATHB51<---------AHL20(2) ----->DOF2                         --------->MYB59                     --------->AHL20(2)   -------- -------TOE2(3)                   <---------MYB52(1)             <----------ID1   <----------DOF2 ---   aaggtggtttctgttttttttttctaaaattcgacagtttggtttataagtatctaaattcaacttgaagacaaataattctaactttattttatttaaa  3957500          --------->DAG2         ---------->DOF2                                                                  <---------ATHB12 ---AHL20(2)                                                                              --------->AHL20(2) ---------YAB1                                                             ------>ZmHOX2a(1) --AHL20(2)                                         --------->REM1(1)     --------->TOE1(3)    ------ ->AHL20(2)                          <-----------RAV1(2)                  --------->TOE2(3)--------->AHL20(2) -------->GT1                <---------AHL20(2)   <-----------GT1 <-------TEIL  --------->YAB1-------   ttgtgataaaaaaaagtaacccaaaacatattttttggttcaggcatatgtgttacaacttacaaggatgcattatcctcaaacaaaatccaataaataa  3957600                                                                                      ----------->ARR10                                                                                  ----------->GT1                                                                            ------->PIF5                                                                            <-------MYC3                                                                            ------->MYC3                                                                            <-------MYC4                    --------->CCA1(2)                                       ------->MYC4 <------ZmHOX2a(2)                    <------ZmHOX2a(2)                                       <-------PIF5 <---------RVE1(1)                   <---------ARR14(2)                                       <-------MYC2<---------AGP1                   <-----------ARR10                                        ------->MYC2--------->ARR11(3)                   --------->AGP1                                          <---------ANAC55(2)                   <---------ARR11(3)                                      <---------ANAC46       ---                   --------->ARR14(2)                                      <---------O2 <---------ARR11(3)           <---------MYB46(3)                                              <---------TGA1a <---------          --------->ALFIN1   <---------AHL20(2)                            <--------ABF1--------->AGP1       --------->DAG2------>ZmHOX2a(2)  --------->O2                       ========================== --->AHL20(2)      --------->ARR11(3)   <---------O2                       --------->O2<---------CCA1(2) -->AHL20(2)       <---------AGP1   <-----------HVH21   --------->ANAC46   --------->TGA1a------>ZmHOX2a(2)   aaaatagagaaggtggatgaagatctaagaattaatactgtcacgagaaaacgtatacaatccactaatacatagccacgtgtatggttagatcttttca  3957700                                                                     --------->DEAR3(1)                                                                     --------->WRKY38(1)                         <---------ANAC46                            --------->WRKY12                       ------>NtERF2                  <---------AHL20(2)                       --------->LBD16               --------->AHL20(2)                      <---------ALFIN1               <---------AHL20(2)                             -         <---------AHL20(2)      --------->YAB1  <---------AHL20(2)  --------->ETT(2)  ----------->HVH21         --------->AHL20(1)    <-----------TBP   --------->AHL20(2)  <---------ETT(2)  --------->WRKY38(1)         <---------AHL20(1) --------->ARR14(2) --------->ANAC55(2)  --------->ATERF1(1)--------->WRKY12        --------->YAB1--------->DEAR3(1)  --------->ZAT6            <------NtERF2      --------->WRKY45 --------->CBF       <---------LBD16  <---------MYB52(2)        <-----------HVH21    <----------DOF2< -DOF2  --------->AHL20(2)  <---------ARR14(2) <---------ANAC55(2)<---------ANAC46  *TSS          --- =bZIP_DOF          <---------ATERF1(1)  <---------TOE2(3)<-----------GT1     <---------AHL20(2)  <--   aacaatccgattatattttgtgctccgccgtatatttataactaacattacttaattaaataaccatgtcgtcgacccattttttttctttgacccaaaa  3957800                                                                            ------>ZmHOX2a(2)                                                                           <---------At4g35610                                                                          <---------AGP1                                                                          <---------ARR11(3)                                                                          --------->GLK1(2)                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                         <---------ARR14(1)                                                                         <---------CCA1(2)                                                                      --------->ATERF1(1)                                                                      <---------LBD16                                                                      <------NtERF2                                                                     ------>NtERF2                                                                    <---------DEAR3(1)                                                                    --------->DEAR3(1)                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                  ------>NtERF2                                                                  <---------ATERF1(1)                                                                  <-----------HVH21                                                                 <---------O2<---------YAB1                                                                 --------->DEAR3(1)                                                                 --------->RAP2.3(2)                         <---------AHL20(2)                      --------->O2----------->HVH21                        --------->AHL20(2)                      --------->RRTF1(1)                        <---------AHL20(2)                      --------->RAP2.3(1)                       --------->YAB1                         --------->DEAR3(1)              <---------AHL20(1)                              ------->GAMYB<------ZmHOX2a(2)              --------->AHL20(1)                             <------------AtMYB77         --------->AHL20(2)  <---------ICU4<---------------------WRI1<---------ATERF1(1)--------->ARR14(2)     <---------YAB1<---------AHL20(2)    --------->ANAC58    --------->MYB46(3)        --------->GLK1(1) -------->AHL20(2) --------->AHL20(2)    --------->ANAC58    --------->DEAR3(2)        <---------GLK1(1) ---------AHL20(2)--------->AHL20(2)    <---------LBD16--------->ANAC58 --------->LBD16<---------CCA1(2) ------>TOE2(3)<---------AHL20(2)     <---------SPL7   --------->ANAC58<---------TOE1(2)<---------ARR14(2) --------DOF2<---------AHL20(2)<-----------GT1  ----------->GT1 --------->ERF1      <---------ZAT18   ctttaatttgattatatatatttaattttaatttttccatcgcacggagattgtaacaaggaaaccgccgtcgccggatctgatagtgcatatccatgaa  3957900                                                            --------->SPL7                                                          <-----------HVH21                                                      <-------TEIL                                                     --------->ARR14(1)                                                     --------->CCA1(2)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    --------->ARR11(1)                                                    <---------GLK1(2)                                                   <---------HSFC1(2)                                                   --------->HSFC1(2)                         <------                                       --------->ARR14(2)<---------ANAC58                 <----------                          ------>ZmHOX2a(2)        <---------HSFB2a(1)              <---------ANAC46                        --------->ARR11(3)         --------->HSFB2a(1)             --------->ALFIN1 -                        <---------ARR11(3)        ----------->ARR10<---------DAG2 <-----------HVH21<-                  <----------DOF2      <---------ARR14(2)<---------ANAC58  ------>ZmHOX2a(2) <-------   gtagaagacgaagaaacttactttctgatcttagaacggagtatatgtacagaagattcgcgtccctcaatttttgatctcaagggtcgggtttaccttt  3958000                           --------->ARR14(2)                           <---------ARR14(2)                        <---------ANAC58                  --------->GLK1(1)                        <---------ANAC46             <---------LBD16                              ---                    <----------DOF2              --------->ARR14(2)                               <--                   <---------ANAC58              <---------ARR14(2)                               <-- ----DOF2          <---------ANAC58           --------->HSFB2a(2)                                 --- -GT1        <---------AtMYB61                <---------HSFB2a(2)                               <---- --------->ID1    <------NtERF2              <---------LBD16                                --------- ----------GT1  <---------RAP2.6(2)          <-----------------AGL2                 --------->ARR14(2) --DAG2  <---------YAB1 <---------ANAC58  <---------GLK1(1)              <------ZmHOX2a(1)  <--------   ttttccttcttatttttggtggctttgcgttttctcattcgacgatttctggatttggggatttcaaaaccatgaggaagaagctcgatactcggttccc  3958100         <-----------GT1 ------>ZAT2 -------At4g35610 -------ZAT2                                                         <-----------RAV1(1) ------>At4g35610        <---------ICU4                       <----------DOF2 -------RAV1(2)     <---------WOX13(1)             --------->HSFB2a(2)             <------ZmHOX2a(2) >ARR14(2) <---------ANAC58                        <---------LBD16  ------>ZmHOX2a(2)   --------->GLK1(1) -ARR14(2) <---------ANAC58                        <---------HSFB2a(2) <---------MYB52(1)      ------   agctgtaagtttttcgtctctaattgatcatttctgaaattgaagtccaatttctcggaaattactttgatctgttgtttttcagatcgaatttccaaca  3958200                           --------->YAB1  --------->ARR11(3)                 --------->ZAT18           <---------ARR11(3)                 <---------ZAT18        --------->ANAC55(2) --->ZAT6       <---------ZAT6          <---------ANAC55(2)               ----------->HVH21 <--------   ctatttgggattagattagtgttctacgatgaaaattagattaagtatctcatttctggcgaattagttttagcaaatgacctagtagtcaatttcaccc  3958300  Previous    Next  AGI:  At3g12480.1    Description:  transcription factor, putative. similar to DNA binding / sequence-specific DNA binding [Arabidopsis thaliana] (TAIR:AT5G19490.1); similar to At3g12480-like protein [Boechera stricta] (GB:ABB89765.1); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold; (InterPro:IPR009072) Range:  from: 3957784    to: 3960479    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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