Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------At5g28300                                                           <---        <-----------RAV1(1)                      <---------MYB52(1)                             <----      <----------DOF2                          <---------ANAC58                   <---------ZAT18<--- ------>ZAT18  <----------DOF2             <----------DOF2                        <-------TEIL------>NtERF2 -------ZAT14 <---------ANAC58       <------ZmHOX2a(2)                      --------->YAB1   <------- ------>ZAT14 <---------ANAC58  <-----------GT1<---------ANAC58      ----------->HVH21<-------TEIL   tccactgtctttgttggctttcactgcctctgttttacgatccctctttccgtttgcaaactgcaacgagagtgacactcatggtgcattcatcgacacc  3933700                                                                                                   <-                                                                                                 ====                                                                                                 <---                                                                                                 <---                                           ------>MYB46(1)                                      -----                                           ------>MYB83                                         <----                                         --------->TOE2(2)                                      -----                               --------->LBD16                      --------->ARR14(2)          <----                              <---------HSFB2a(2)                   <---------ARR14(2)          <----                           --------->GLK1(2)                 <---------YAB1               <---------ETT(2)       <-----------GT1    <---------GLK1(2)-------->P      <---------ICU4                 --------->ETT(2) ------DAG2              --------->At4g35610            --------->YAB1                    ----------- -----DAG2      <---------MYB52(1)       --------->TOE1(2) --------->YAB1          --------->ZAT14--- -------DOF2   <-------GAMYB  --------->HSFB2a(2)     --------->ANAC58             <---------ZAT14=== --ALFIN1<---------ICU4  <---------At4g35610          --------->ANAC58    --------->ARR11(3)    -----   tttttgtataaacatttcgttgttctcagattccagaggtaaacctactacctgctaagcatcatcactggattcagaacttgactaaactgttgacaga  3933800    <---------TOE2(3) ---------DOF2 ==================HOX2a_HOX2a ---ZmHOX2a(2) ------RVE1(1) ---->AGP1 -----AGP1   --------->ZAT18 ---->ARR11(3) -----ARR11(3) -----ARR14(2)          --------->YAB1       ---------->DOF2 >HVH21     <------ZmHOX2a(1)            ----------->RAV1(1)                      ------------>ATHB5 --->ZmHOX2a(2)   --------->ANAC58<-----------RAV1(1)                      ---------->DOF2      ----- ==================HOX2a_HOX2a   <---------MYB52(1)    <---------ZAT6   ------>MYB46(1)    ---------- ---->ARR14(2)    --------->ANAC58<---------MYB46(3)<---------AtMYB61   ------>MYB83 <---------DAG2   tcttttgatgttgaggacacaagtaaacataacccgttgttgcccacaaaagctatggtgttagagtctctaccttccaaagggccaatttttgtctcca  3933900                                         <------MYB46(1)                                         <------MYB83                                        <---------AtMYB61                                       <--------P                                      <-------GAMYB   ---------->DOF2          <---------------AtSPL8                                     --------->MYB55(2)             ------------------------>ANAC81--                             --------->DAG2          --------->AHL20(2)    ---------->DOF2         -- ---------->DOF2            ---------->DOF2   ----------->GT1       ----------->GT1      <---------AHL20(1) ----->DOF2               >>>>>>>>>GATA-1<---------MYB46(3)        --------->DAG2        --------->AHL20(1) >ID1           ----------->GT1      <---------MYB46(3)           ---------->DOF2        --------->AHL20(2)   aagtaaagagagtcgattcagtaatatagataaagttggaggttggttttgtaaataaaagaaaacaaaaaagtaagaaaaggagtacaaatattttagt  3934000             --------->ANAC46             --------->ANAC58             --------->ANAC58         --------->AtMYB61      <---------WRKY18(1)     --------->WRKY38(1)                 <---------ARR11(3)                <----------DOF2     --------->WRKY12              <-----------GT1                      <-----------GT1   <------------CBF           <----------DOF2        <<<<<<<<<TBF1   <---------CCA1(2) ------->ANAC58               <---------DAG2 <-----------GT1  <---------DAG2         *TSS         --- ------->ANAC58      ----------->ARR10  <---------CCA1(2)     <----------DOF2        <-----------GT1   catgccattgaccacacgaagagaagagtctcctttttctctatatctaaccttcttcttctcactttcccatttctctttcccaaattacatctcaaat  3934100               <----------DOF2                                                      <---------ICU4           --------->REM1(1)                           <---------At4g35610          --------->YAB1           <---------ALFIN1                            --------->At4g35610         <---------ATHB12         ----------->RAV1(1)                    --------->YAB1            --------->DOF5.7(2)     <--      --------->ANAC58                     <---------ZAT14           --------->ETT(2)    <---------YAB1      --------->ANAC46        --------->ZAT2    <---------ICU4     --------->REM1(2)-------->ATHB1<--      --------->ANAC58   ----------->HVH21 --------->ZAT14      ------>ZmHOX2a(1)--------->WOX13(1) ------>ANAC46<---------DAG2  --------->At4g35610    <---------RAP2.6(2)  --------->At5g28300  <-----   acacaatccagcaacacctttctctctctaacagcttcgagcttctacactcatggctgcttcatcctatgtagacggtaacccaatcattctaatttta  3934200                                                                              --------->MYB52(2)                                                                            <--------P         <---------------AtSPL8                                   <-----------------AGL3  <---------ANAC58                                                <-----------------AG  --------->MYB59  <---------ANAC46                                                <-----------------AGL2--------->MYB46(2)  <---------ANAC58         <----------DOF2        <------ZmHOX2a(2)         <---------MYB52(1)    --- -------DAG2               <---------DAG2        --------->ARR11(3)       <---------MYB46(3)      <-- --------DOF2   --------->ANAC46                 <---------ARR11(3)      <---------TOE2(3)       ---- ------GT1   <---------ZAT18                  --------->SPL7      ------>ZmHOX2a(2)   <---------MYB52(1)   ctttacttgtacttgtacacatctctcaacttttttagtcttgttccatacgatctataaacttttgatccgattttggttagttttcgttaggcagaaa  3934300                                                  --------->ARR14(2)                                                  <---------ARR11(3)                      --------->AHL20(2)          <---------ARR14(2)                      <---------AHL20(2)          <-----------ARR10       <---------GLK1(2)                    <------NtERF2     <---------AHL20(1)                   <---------ANAC46     --------->AHL20(1)               <---------WOX13(1)         --------->ARR11(3)     --------->ARR11(3)          <---------ANAC58 --------->ARR11(3)     <---------ARR11(3)          <---------ANAC58 --------->GLK1(2)  --------->AHL20(2) <---------WOX13(1)   --------->ETT(1)       <---------ARR11(3) ------>AHL20(1)--------->At4g35610 --------->ATHB12         --------->ANAC55(2) -------AHL20(1)<---------ZAT2   <---------AtLEC2<---------GLK1(2)         --------->PCF5          <- ----->AHL20(2) <---------At4g35610<---------YAB1<---------ARR14(1)------>ZmHOX2a(2)             ----   tatataaaatattctcttagctgattaattgttttgcatgattgtcggagagaatcttcagacatgtgatcttcatggtccctcgtcttgtctgtgaaat  3934400                                          <---------AHL20(2)                                          --------->YAB1                                          --------->AHL20(2)                                         <---------YAB1      ------>MYB83                     --------->YAB1      ------>MYB46(1)                  <---------ICU4    --------->DEAR3(1)                <---------YAB1    --------->AtMYB61                 --------->ICU4                         --------->ATHB12    <---------ALFIN1                 --------->AHL20(2)                      <---------ICU4   <---------MYB55(2)                <---------AHL20(2)                      --------->ATHB51   --------->MYB46(3)                <---------AHL20(1)                      <--------ATHB1  --------->SPL7                   <---------YAB1                           <---------ATHB51 ------>MYB46(1)                 <--------HAHB4                             --------->ICU4 ------>MYB83                    --------->YAB1                    <---------WOX13(1)            ---- --------MYB59                  <---------YAB1                   --------->ATHB12        --------->ATHB12 ----->MYB52(1)         ------->TEIL--------->YAB1              <---------YAB1          <---------YAB1   accgaaccacccatatgtttcacatgaattttgtattattataattatatccaaattgatataaacttgattgaaggaataattgaattcatgtttggag  3934500                                                     <-------GAMYB                                                    --------->MYB111(2)                                                    --------->MYB52(2)                                                    --------->MYB111(1)                                                    --------->MYB55(2)                                                    <---------MYB46(3)                                                   <--------P                                                <---------AtMYB61                                              ==========================RAV                                              <-----------RAV1(1)                                           ==========================HOX2a_HOX2a                                           ------>ZmHOX2a(2)                                          --------->CCA1(2)                                          ===========================HOX2a_HOX2a                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         <---------ARR11(3)                                      ----                                         --------->ARR11(3)                                <---------                                         <---------AGP1                        --------->At4g35610                                         <---------ARR14(2)     <---------TOE2(3)          <---------LBD16                                         --------->AGP1       ------>ZmHOX2a(1)<---------ZAT2 <------ZmHOX2a(1)                                      <---------HSFB2a(2)   ----------->RAV1(2)<---------At4g35610 ----->ATERF1(1)     <---------ANAC46 --------->HSFB2a(2) <---------ARR14(2)   --------->ZAT2--------   tctcccaaaattcagatagagatgtgtgtttgtttatattctagatctgtgtggtagttgaatcctgaggtttttgttctctgctgaaatttttcaggag  3934600  Previous    Next  AGI:  At3g12360.1    Description:  ankyrin repeat family protein. Identical to Ankyrin repeat-containing protein At3g12360 [Arabidopsis Thaliana] (GB:Q9C7A2;GB:Q8LED2;GB:Q9LHH2); similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G09550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41571.1); similar to IGN1 [Lotus japonicus] (GB:BAF48666.1); similar to hypothetical protein OsJ_009962 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26479.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 3934085    to: 3936701    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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