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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------------>
CBF
<------------
CBF
<---------
WRKY38(1)
<---------
WRKY12
<---------
ANAC58
------------>
CBF
<---------
ANAC58
--------->
WRKY18(1)
<---------
ANAC46
<-----------
HVH21
------------>
CBF
<---------
MYB52(1)
----------->
GT1
--------->
LBD16
----
<----------
DOF2
<-----------
GT1
--------->
ANAC46
---------
<---------
GLK1(2)
--------->
HSFB2a(2)
--------->
ARR11(3)
--------->
MYB52(2)
<---
------>
DOF2
<-------
GAMYB
<---------
HSFB2a(2)
<---------
ARR11(3)
<--------
P
-------->
P
<----
aaagatggaatcttttcggttgagtatggttctataaaccggtcaattgcaatatctatacccgagacaattcgggttagtctctctaaccagttccaat
3905100
------->
GAMYB
<------------
AtMYB77
<---------
MYB55(2)
--------->
MYB46(3)
--------->
ZAT2
------>
MYB46(1)
<---------
TOE2(3)
------>
MYB83
--------->
MYB52(1)
----->
AHL20(2)
--------->
At4g35610
--->
CBF
--------->
MYB46(3)
<------------
CBF
<-
------
AHL20(2)
---------->
DOF2
------------>
CBF
<---------
DOF5.7(2)
--
-----
ATHB12
<----------
DOF2
------>
ZmHOX2a(1)
<---------
ZAT2
<------------
CBF
taatctgtttagttttcctttggatgtaaaggtgtttagagtttgttttctccttcaattaccaactgccaactggttaacgaattgaaattgagggttt
3905200
<---------
ANAC58
------->
TEIL
<-------
TEIL
--------->
ANAC55(2)
<---------
ANAC58
<---------
bZIP60(1)
<---------
TGA1a
<---------
ANAC46
<---------
ANAC58
--------->
bZIP60(1)
<-----------
RAV1(2)
-----
<---------
O2
<---------
ANAC58
------
===========================================
bZIP_DOF
<---------
AHL20(1)
--------->
O2
<---------
ANAC46
<---------
AHL20(2)
--------->
ZAT18
<---------
KAN4(2)
<----------
ID1
--------->
AHL20(2)
<---------
ZAT18
<---------------
AtSPL8
---------->
DOF2
<----------
DOF2
<---------
ZAT18
--------
At4g35610
--------->
TGA1a
--------->
ANAC58
----------->
GT1
<---------
TOE1(2)
<-----
------->
At4g35610
----------->
HVH21
--------->
ANAC58
<---------
TOE1(2)
--------->
AHL20(1)
gagctgaaaacacttgggcacttgacgtgagaatgtacgtggaaggccagaagggacaaagtcccatgtaaaatgctttgcaggttattttattgcacat
3905300
<---------
ICU4
--------->
ATHB12
--------->
ICU4
<---------
YAB1
<---------
ICU4
--------->
ATHB51
-------->
ATHB1
--------->
ATHB12
----------->
HVH21
--------->
ICU4
<---------
ETT(2)
<---------
AHL20(2)
<---------
ATHB51
--------->
ETT(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
<---------
ATHB12
--------->
MYB52(1)
--------->
AHL20(1)
<----------
ID1
<---------
TOE2(3)
--------->
HSFB2a(2)
<---------
AHL20(1)
------>
HVH21
<---------
AHL20(2)
<---------
HSFB2a(2)
--------->
AHL20(2)
-
->
MYC3
<---------
AHL20(2)
<---------
ANAC46
<--------
P
<---------
ATHB12
--------
--
MYC3
--------->
AHL20(2)
<---------
ICU4
----------->
HVH21
<-----------
GT1
----------->
GT1
gacataggacaaattattgtttaatgatttcagcattgcctagaaaaccggaccggttgacagtttgaaccggttcaataaatttgtatggggtaatatt
3905400
<-
<---
<---
<---------
ANAC46
--------->
MYB52(2)
<---
--------->
MYB52(2)
<-------
GAMYB
<----
<-------
GAMYB
----------->
GT1
-----
--------->
MYB52(2)
<---------
MYB46(3)
<---------
MYB52(1)
==============
<---------
ZAT14
----------->
GT1
<---------
ANAC46
----------->
GT1
<----------
DOF2
--------->
DOF2
<---------
ZAT6
--------->
YAB1
<--------
P
<---------
ARR14(2)
<---------
HSFC1(2)
->
ICU4
--------->
ZAT6
<---------
MYB52(1)
--------->
ALFIN1
--------->
ARR14(2)
--------->
HSFC1(2)
<
tgtaaagctaagactatagagttcgttaggggtaacaagaatagtatggggggttagtttgcaaattcccgttaaatttgtcgatgtttctttttgggat
3905500
<---------
At4g35610
<---------
ANAC58
--------->
ETT(2)
------>
ZmHOX2a(2)
<---------
ETT(2)
<---------
ANAC58
<------
MYB83
<------
ZmHOX2a(2)
<------
MYB46(1)
--------->
ARR14(2)
--------
ANAC46
<---------
ARR14(2)
------
MYB46(3)
<---------
ANAC55(2)
---
MYB83
*
TSS
--------->
ANAC55(2)
<<<<<<<<<
TBF1
---
MYB46(1)
--------->
O2
<---------
YAB1
<---------
ZAT2
-----
AtMYB61
--------->
TGA1a
<---------
LBD16
--------->
ZAT2
<----------
DOF2
<----------
DOF2
---->
ALFIN1
<---------
TGA1a
--------->
ICU4
--------->
At4g35610
<---------
DAG2
============================
bZIP_DOF
<-----------
GT1
<---------
At4g35610
--------->
SPL7
---------
MYB46(3)
<---------
O2
----------->
GT1
<-----------
RAV1(1)
--------->
WOX13(1)
--------->
TOE2(3)
ggtgggtttgtagacaaatc
gacgtctcagagattgtaattacggatcgtgtctctgctgcttcttcttctttcaatccgatttcggacaaccttttact
3905600
<---------
DAG2
<----------
DOF2
<------------------
<----------
DOF2
<----------
DOF2
<---------
ANAC58
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
<------------------------
ANAC81
--------->
At4g35610
--------->
ARR11(3)
<---------
ANAC58
<---------
GLK1(1)
--------->
At4g35610
<---------
ARR11(3)
<-----------
GT1
<------
--------->
GLK1(1)
<---------
At4g35610
--------->
ANAC58
---------->
ID1
<----------
DOF2
<------
ZmHOX2a(1)
<---------
At4g35610
--------->
ANAC58
<------------------------
ANAC81
<-----------
RAV1(2)
<-----------
RAV1(2)
--------->
HSFB2a(2)
<------------------------
ANAC81
<
cagacaggagatttcagtttttttcag
gtgagcttcttgctttctgcaactcaagctcttttgttttttgggttttgtttctttcctttttcttttcttt
3905700
<----------
DOF2
<---------
DAG2
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
HSFC1(2)
--------->
TOE2(3)
<----------
DOF2
------
ANAC81
<-----------
GT1
<----------
DOF2
<---------
At4g35610
----
DOF2
<---------
HSFC1(2)
<-----------
GT1
---------->
DOF2
<----------
DOF2
----------
DOF2
------>
ZmHOX2a(1)
--------->
ATHB12
<----------
DOF2
----
ttcttttgtttgaagtttcctccttctttgttttactttagtcattggaaagcttactttttctcactttgtgatttgcctttggaaattaagacttagt
3905800
------->
GAMYB
--------->
MYB46(3)
-------->
P
--------->
ANAC58
--------->
ANAC58
--------->
MYB46(3)
<---------
At4g35610
--------->
At4g35610
--------->
ANAC46
<---------
ANAC46
<---------
At4g35610
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
<---------
ANAC58
------->
TEIL
--------->
HSFB2a(2)
----------->
STF1
------>
MYB46(1)
--------->
YAB1
<----------
DOF2
<---------
TGA2(2)
------>
MYB83
--------->
ARR11(3)
<---
----->
WRKY12
---------->
DOF2
----------->
TGA1
<---------
MYB59
<---------
ARR11(3)
----
tgactttcagaagcttataaagtttcaagttttttttgttcatttgatgacgttttcagcaaccaaattccatcgaattatcttgatgaatccttatgga
3905900
<---------
MYB52(1)
<---------
GLK1(1)
--------->
ATHB12
<--
--------->
At4g35610
--------->
ARR11(3)
<--
------
GLK1(1)
<-------
GAMYB
<---------
GLK1(2)
---
----->
GLK1(1)
<----------
DOF2
<---------
MYB46(3)
<---------
ARR11(3)
--------->
ATHB12
---
tttcaaatgttagtatgctttgaatttcatgtgtctgttgaattctgttaagagtcatagattttgaatccttggtgatgagttattggtttgagtgatc
3906000
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AGI:
At3g12250.1
Description:
TGA6 (TGA1a-related gene 6); DNA binding / transcription factor. Identical to Transcription factor TGA6 (TGA6) [Arabidopsis Thaliana] (GB:Q39140;GB:Q9C7D1;GB:Q9LHI1); similar to AHBP-1B (bZIP transcription factor HBP-1b homolog), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G06950.3); similar to AHBP-1B (bZIP transcription factor HBP-1b homolog), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G06950.2); similar to AHBP-1B (bZIP transcription factor HBP-1b homolog) [Arabidopsis thaliana] (TAIR:AT5G06950.4); similar to TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] (GB:AAK84889.1); c
Range:
from: 3905521
to: 3908987
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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