Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ANAC58                         <---------ANAC46                         <---------ANAC58                     <-------GAMYB                    <---------MYB46(3)                    --------->MYB111(2)                    --------->MYB55(2)              <---------YAB1  ---------->DOF2                    --------->MYB52(2)  --------->ANAC46        ---------->DOF2                   <--------P           --------->ANAC58  <---------ANAC55(2)                       <     <----------DOF2--------->MYB111(1) --------->ANAC58  --------->ANAC55(2)---------->DOF2<--------   ggccctgcgtttttgtttttggtagttgtttgcaattcaaacaagtcactaattctgatcaagtgataaagaaagaatgaaaagtttttggattttacca  3893600                                          --------->ANAC46                   <---------------------WRI1            --------->ZAT14             <---------ALFIN1              <---------LBD16 --------->YAB1  --------->ZAT14     --------->AtMYB61           <----------DOF2 ---------YAB1   <---------ZAT14  <------ZmHOX2a(1)           --------->ARR11(3)     --------->ARR14(2) ---GT1     <---------ZAT14   ---------->DOF2                 <---------ARR11(3)     <---------ARR14(2)   ttctcataaataagagcagtgaacgaagaacagaaaggacctccacttaaccagagaagaagagggtctttctctggattactctcagatttgatgaagt  3893700                                         --------->TOE2(3)                                       ------->TEIL                              --------->ANAC58                              --------->ANAC46                           --------->MYB46(3)                        <---------ALFIN1 <---------MYB59                    ------>NtERF2     <-----------GT1             <----------DOF2  <---------ALFIN1                                                    <--            ------>ZmHOX2a(2) --------->ANAC58                                                   ----          <---------ARR11(3)<---------ALFIN1                        --------->ZAT14            ------          --------->ARR11(3)----------->RAV1(1)          --------->AtMYB61   --------->AHL20(2)<-----   agtagaacatttgatctttctctgcctcacccacaccaatgtaccttactcattcaacaccaaaactcagaacacacatatatatagtcatacattatca  3893800                    <---------LBD16                  --------->MYB52(1)                  ------>MYB83                  ------>MYB46(1)                 --------->MYB55(1)                --------->AtMYB61                <---------MYB111(1)                                             ------>ZmHOX2a(2)                <---------MYB59                                                <------ZmHOX2a(2)                <---------MYB46(2)                                            <---------ARR14(2)               --------->DEAR3(2)                                             --------->ARR14(2)               --------->HSFB2a(1)                                            --------->ARR11(3)               <---------HSFB2a(1)                                          ----------->ARR10    --------->YAB1-------->P  --------->ZAT2                     --------->GLK1(1)           -------- --------->YAB1<---------HSFC1(2)                           <------ZmHOX2a(1) <---------ARR11(3) ----ZmHOX2a(1)--------->HSFC1(2)                           ==========================HOX2a_HOX2a ------->GT1 <---------ARR14(2)                             ===========================HOX2a_HOX2a --->YAB1    --------->ARR14(2)    ---------->DOF2       <---------LBD16   <--------P        -------- ----LBD16  <------ZmHOX2a(1) <---------ZAT2    <---------ANAC46 <---------GLK1(1)------>ZmHOX2a(1) -   ggataataagaagaggaacctacccggtctcgagctcgaaaggaagagggccttggaaaccaggaagaaatctgatggtagatcctgaatcaacaagctg  3893900                                                                                                   --                            --------->ARR14(2)                                                     <- ->ZAT2                     <---------ARR14(2)                                             --------->YAB1 ->At4g35610                --------->GLK1(2)                   <----------DOF2         <----------DOF2 -------->YAB1     ------->TEIL  ----------->HVH21 <----------DOF2                      *TSS---------   aatcaaaacaagtagaagatgaaacttgagtatccatgacaagtagtagcactctttccccattctctttgatcaaaagtttttgaatttctttcacaat  3894000                --------->ARR11(3)                <---------AHL20(1)                --------->AHL20(1)               <-----------TBP       <---------AHL20(2)       --------->ATHB12<-----------GT1      --------->AHL20(1)                                           <------------CBF      <---------AHL20(1)                                        ----------->RAV1(1)      <---------AHL20(2)                                       --------->ANAC46      --------->AHL20(2)                                     <---------ALFIN1 --------->ZAT14 --------->GT1 --------->AHL20(2)                            --------->ANAC46 <---------REM1(2) --------ZAT6<---------------AGL15                        --------->PCF2      <---------ZAT14 --->CBF<------------CBF             ---------->DOF2  ---------->DOF2  ---------->DOF2   agagataatttattgaaatatatagtaaccatacaaggccaaagcctgataaacaaaaaagccccacaacattgaaagtctacacagtttgcaaaatgca  3894100                                                            <---------ZAT6                                      ------>ZmHOX2a(1) --------->REM1(2)                               <---------GLK1(2)       <---------ANAC46                               <---------ARR14(2)     --------->LBD16                          <-----------HVH21           ------>NtERF2                         --------->bZIP60(2)         --------->DEAR3(1)                            --                         --------->ANAC58            <---------ANAC46       ----------->RAV1(1)    --                         --------->ANAC58     --------->CCA1(2)     ---------->DOF2<----------ID1  --              ----------->HVH21--------->ARR14(2)  --------->At4g35610   --------->ANAC46 --------->ALFIN1   attcatcacaaaaacattgacagagacaggtcatattctcctaagaagaaatgagccgcgtagagttaccaaaagacacaacaaaacaacaagtggaaga  3894200                                                        <---------At4g35610                                                        --------->At4g35610                                                    --------->ANAC58                   --------->ZAT18                  --------->ANAC58                   <---------ZAT14                ---------->DOF2        --------->MYB52(2)<---------ZAT6  <---------ANAC58 ------->ANAC58    <---------ARR14(2)     <---------ANAC46                                    ------- ------->AtLEC2    --------->ZAT14        <---------ANAC58                              --------->AtMYB61 ------->ANAC58    --------->ARR14(2)   --------->ZAT18--------->GLK1(2)         ---------->ID1   catgcaagattagttacagagtatactagtgatgaagtctagtgccttgtacaaaagcatctgaaaacaagatggacatttttgtctccaccaaaatcac  3894300                               ----------->GT1                              --------->DAG2                          <---------------------WRI1                 --------------->AGL15 <---------ARR11(3)         <---------At4g35610     -----------                 <---------------AGL15 --------->ARR11(3)         --------->At4g35610   ---------->DOF2 -->YAB1   <----------DOF2  ---------->DOF2 <-----------GT1   ----------->RAV1(1)---------->DOF2   aagtgtaatctatctttttttttttttggtaaaaggtgaaagatttataccattttcaagtttgcgacagcatacagagaaaacaaagaagaaagaaaaa  3894400                                   <---------GLK1(2)                      --------->AHL20(2)                              <----------DOF2                   --------->DAG2                           <---------YAB1         <-----------RAV1(1)     <---------AHL20(2)                       <---------DAG2           --------->At4g35610   ----------->GT1    <---------MYB59                       <----------DOF2          <---------At4g35610 ---------->DOF2    <---------ARR11(3) >GT1 <xxxxxxxxxxxxxxxxsmallRNA(i)<---------At4g35610          ---------->DOF2    <-----------GT1   ccaaaaactatgctctagagacctgctttatgctttagcttctctctgtatgctgtcgcaaaaccaaaagtaaagtttaattagttacagaccttactca  3894500  Previous    Next  AGI:  At3g12203.1    Description:  SCPL17 (serine carboxypeptidase-like 17); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 17 precursor (SCPL17) [Arabidopsis Thaliana] (GB:Q9C7D6;GB:Q9LHI6); similar to SCPL16 (serine carboxypeptidase-like 16), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G12220.1); similar to 1-O-acylglucose:anthocyanin-O-acyltransferase [Clitoria ternatea] (GB:BAF99695.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 3891364    to: 3893988    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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