Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ANAC46                                                                                        --------->ANAC58                                                                                        --------->ANAC55(2)                                                                                        <---------ANAC55(2)                                                                                        --------->ANAC58                                                                                       <-------TEIL                                                                                      --------->CCA1(2)                                                       ----------->GT1                --------->ARR14(1)                                                      <---------TOE2(3)              <---------ARR14(2)                                               <---------ARR11(1)                    --------->ARR11(1)                                               --------->ARR11(3)                    --------->ARR14(2)                                               <---------ARR14(2)             <---------YAB1                       --------->At4g35610     --------->ARR14(2)           --------->YAB1      <---------ARR11(3)                       <---------ARR11(3)           --------->ATHB12 --------->GT1         <---------At4g35610    <---------CCA1(2)            --------->ICU4       <---- --->GLK1(2)        <------ZmHOX2a(2)     <-----------HVH21                <---------YAB1       <----   ctagtgaatatcactctaagcgatcagctacagagactcttaagggtcatatcttcgaggttaaatttgtttaagttatgattagtagatacgaaattac  3847400                             ----------->GT1                           ---------->DOF2                        --------->LBD16                       --------->HSFB2a(2)                       <---------HSFB2a(2)                       --------->ANAC58                       --------->ANAC55(2)                                               <----------DOF2                       --------->ANAC58           --------->ICU4                      ------->TEIL                       <---------ANAC55(2)   --------->ANAC58                    --------->MYB52(1)                      <---------LBD16 <----------DOF2  --------->MYB52(1)    ---------->DOF2 -----ANAC46         --------->MYB52(1)      --------->ANAC46               <---------AHL20(2) -----YAB1        ------->TEIL----------->GT1--------->ANAC58               --------->AHL20(2)<------   gagtaagagaacagaacatgaacttacggaaaagataaaactttactacgaaattagtaacagaacataaacatgaaattaaagaacgaagctttattac  3847500                                                                  <----------ID1                                                                 --------->SPL7                <-----                                                                --------->CCA1(2)              <-----                                                               <---------ARR14(2)             -------                                                       --------------------->WRI1         <---------AHL20(2)                 <---------MYB52(2)      <---------ARR11(3)    --------->ARR14(2)        --------->AHL20(2)      --------->YAB1-------->P    --------->ANAC58    <----------DOF2                <---------ATHB12   <----------DOF2 --------->MYB52(1)    --------->GLK1(2)  <---------------------WRI1 --------->TOE2(3) -----GT1        <---------MYB59  --------->ANAC58 --------->GLK1(2)             --------->WRKY18(1)   gacttctttgataaatggaactaacctagagaagagaagccaaaatctaagaaattcttttgggcgatacgacgaagaagacagtcaaacattaatttgg  3847600                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                            --------->TOE2(3) -MYB83     --------------->AGL15                                        --------->ARR14(2)         - -MYB46(1)  <----------DOF2                --------->WOX13(1)            <---------ARR14(2)    <----- -->MYB59   <---------------AGL15        <---------ATHB12  <---------WOX13(1)------>ZmHOX2a(1) ------   tcactaataccagacttttttgggtaacccagactaaaccgaaatcaatctggctctcttaattgaaccgattcaaatccttcatgtccaatccgatttt  3847700                                                       --------->WOX13(1)                                                      ------>ZmHOX2a(2)                                                      <-------TEIL                                                     <------ZmHOX2a(2)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                 <---------HSFB2a(2)                                                 --------->HSFB2a(2)                                                 <---------ANAC46                                                 --------->ANAC55(2)                                                 <---------ANAC55(2)                                              <---------ARR14(2)                                            --------->LBD16                                          <---------LBD16 --------->MYB46(3) -------->YAB1                        <-------TEIL--------->LBD16       ----------->GT1             < ----AHL20(2)                --------->AHL20(2) <---------LBD16        ----------->GT1            *TSS --->AHL20(2)--------->GLK1(2) <-----------GT1--------->ARR14(2)   ---------->DOF2<-----------RAV1(2)   aatcaaaaccagaagaatcgagttttgcgaattaaaccggttcatccggttccggatccatcaaacgataaaagagttaaaaacccagaagataagtgtg  3847800                                                              --------->ZAT18                                                              <---------ZAT14                                                              --------->ZAT14                                                              <---------ZAT18                                                         <---------ANAC58                                                         <---------ANAC46                                                    <---------ICU4                                                --------------->AGL15                                               ----------------->AGL1                                               ----------------->AGL2                                               <-----------------AGL1                                               ----------------->AGL3                                               <-----------------AGL2                         <<<<<<<<<TBF1         <-----------------AGL3                      <<<<<<<<<TBF1           ------>NtERF2 <-----------ARR10   -------->P                   <<<<<<<<<TBF1<----------DOF2----------------->AG        --------->WRKY12                 <------------------------ANAC81<---------------AGL15  <-------TEIL -----------GT1<---------ARR11(3)     <----------DOF2    <---------ANAC58  --------->WRKY38(1)   ataaacctctctggcaatttcttcttcttcttctctttttctttgctctgccaaaaatggcgagtctactcgattcgttgacaaccagagggttcttcac  3847900                           ------>ZmHOX2a(1)  <---------WOX13(1)                                -----               <------ZmHOX2a(1)             --------------------->WRI1                   <----------            <---------HSFB2a(2)             --------->ATHB12       ------>ZmHOX2a(1)   <---------ANAC58            --------->HSFB2a(2) <---------GLK1(2)       <-----------GT1                <---------ANAC58   catgccctcaatttctaggatttattctcctctagcttcttcaacttcattgacttcttcaccatcttcctcttcttcgattatcccatccttgtcagtt  3848000                                                                        <---------ZAT2                    --------->LBD16                                     --------->At4g35610                   --------->ANAC46                                     --------->ZAT2                   --------->ANAC58                                  <---------At4g35610                  <---------LBD16                                    ------>ZmHOX2a(1)                ------->GAMYB                                    <---------ARR14(2)               --------->MYB46(3)                                --------->ARR14(2)               <---------ALFIN1                                <---------HSFC1(2)              ------>MYB46(1)                                  --------->HSFC1(2)              -------->P                                       <---------HSFB2a(1)                ---              ------>MYB83                                     --------->HSFB2a(1)           <-------             ----------->RAV1(1)                   <---------At4g35610  ----------->RAV1(2)  <-------            --------->AtMYB61             <---------ANAC58     <------MYB46(1)<------ZmHOX2a(1) <----     --------->ZAT6--------->ANAC58       <---------ANAC58     <---------MYB46(3) --------->ARR11(3) ---->ZAT14--------->MYB46(3)         <----------DOF2    <---------LBD16<---------At4g35610 <-------- -HVH21--------->ANAC46    ------>ZmHOX2a(1)<-----------RAV1(1)<------MYB83 <---------TOE2(3)--------   ctctcttacactcaccaacacccgcattcctctcgcttccctttccttgttgcagcaactctggatggttcctctgctgaggaagagctagatttcgagg  3848100                                           ----------->TGA1                                           ----------->HVH21                                         <---------At4g35610                                      <---------LBD16                                            <--- ------>GLK1(1)                   <---------YAB1                                                 <--- --HSFB2a(2)                 <---------At4g35610                                ---------->DOF2  <--- --LBD16                     --------->At4g35610                        <---------MYB52(1)    ------- --ZmHOX2a(1)              <-----------RAV1(2)                   --------->ARR11(3)           <------ -ANAC46   --------->At4g35610 <---------YAB1                    <---------ARR11(3)          <------- ->HSFB2a(2)      <---------ARR11(3)--------->KAN4(2)           <---------GLK1(1)            --------   aattcgaccaatatgctgaagataacttcgcagatgattattcggatgacgaagacgactccatcgatatctccgttcttgagaaagaagcgagagatat  3848200         <---------YAB1 ------ANAC58                 --------->At4g35610 ------ANAC46                 <---------ZAT2    <---------ANAC58 ------ANAC58                 --------->ZAT2    <---------ANAC58 -->GLK1(1)                   <---------At4g35610 ---GLK1(1)          <-----------HVH21   --------->At5g28300                          <-----------HVH21 --ARR11(3)    <---------ALFIN1         ----------->GT1    <---------YAB1--------->ALFIN1          -- ->ARR11(3)   --------->MYB46(3)     --------->GLK1(2)     <---------AHL20(2)    <---------ZAT14  <--   cgtgagagattatgctaccactctgtctcgcgagctcaaaatcggtaatttcttccctgtttttattgtgcatatgtgtggaatacactgtcagtgtgtg  3848300  Previous    Next  AGI:  At3g12080.1    Description:  EMB2738 (EMBRYO DEFECTIVE 2738); GTP binding. similar to GTP-binding family protein [Arabidopsis thaliana] (TAIR:AT5G39960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21919.1); similar to hypothetical protein OsI_035581 [Oryza sativa (indica cultivar-group)] (GB:EAY81622.1); contains InterPro domain GTP-binding; (InterPro:IPR005289); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP1/OBG; (InterPro:IPR006073) Range:  from: 3847798    to: 3852144    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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