Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->YAB1                                            <---------------AGL15                                      --------->ZAT6                  <---------YAB1      --------->ANAC58             --------->DAG2           --------->ANAC58            ---------->DOF2          <---------ZAT18        <---------CCA1(2)  --------->At4g35610            --------->ANAC58 <---------------AtSPL3  <---------At4g35610            --------->ANAC58 <---------------AtSPL8           ----------->HVH21 -----------RAV1(2)              --------->ANAC46 --------------->AtSPL8         <----------DOF2 <--- -->YAB1  <------ZmHOX2a(1)    --------->MYB52(1) <---------ICU4        --------->ANAC46        <----   gatcagatgagaggaaaagtatgagagaaatagaaacggcacactacaaaaataagtacttcaaatctctatatacaaaactcctttgacatatgttttt  3751300                                                        <---------YAB1                                                       --------->AHL20(2)                                                       --------->AHL20(1)                                                     <---------AHL20(2)                                                     <---------AHL20(1)                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                              <---------YAB1                                             <---------AHL20(1)                                             --------->AHL20(1)                                             <---------AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                            --------->YAB1                                        <---------AHL20(1)                                        --------->AHL20(2)                                        --------->AHL20(1)            <---------ICU4              <---------AHL20(2)           <---------YAB1  <---------AHL20(2)--------->AHL20(2)        <-------TEIL   --------->ATHB12<---------AHL20(2)        ---------->DOF2        --------->YAB1 --------->ATHB12    <---------WOX13(1)--------->AHL20(2)  <---------YAB1             <---------WOX13(1) ------AHL20(2)    --------->ATHB12--------->AHL20(2)--------->AHL20(1)            <---------YAB1  <- -----AHL20(2)    <---------YAB1   <---------AHL20(2)--------->AHL20(2)    <---------ATHB12----------   taatgactggttcatcatttttcattgatttaaaattttaaataaattatattaaaatattatacttaaaagactcaatgagtttctcattgataaagat  3751400                                        <---------------------WRI1                                        <---------TOE2(3)                                       ---------->DOF2                                      --------->AHL20(2)         <---------YAB1                                  --------->AHL20(2)            --------->TOE2(3)                                  <---------AHL20(2)           --------->ATHB12                              <---------YAB1                   <---------ICU4                             <----------DOF2                   <--------HAHB4                          <---------ARR11(3)                   --------->YAB1                   <----                          --------->ARR11(3)                  --------->ICU4              --------->AHL20(2) ---------DOF2           <---------CCA1(2)         ---------->DOF2 --------->YAB1         <---------AHL20(2) >DOF2               ----------->GT1  <---------AHL20(2)      <---------YAB1  ---------->ID1  -------   gctttaaggggtgttttttaaaaatgtaaatctttattaattaaagaaacatacaaagtaaaccatcattaatgagttttgtagtttttcaaaaaattat  3751500                     --------->ICU4                                                                --              <---------ANAC55(1)  --------->AHL20(2)    --------->ANAC55(2)                   <----- -------GT1  <-------TEIL     ----------->GT1            <---------ANAC55(2)<-------MYC3     <------- -->YAB1 ----------->GT1 <------ZmHOX2a(1)             <-----------GT1      ------->MYC3<---------AHL20(2)   actatattgaatagttacatgtgattaggagattgaaaaaaatacaaatgaactaaatcacctattggaaaaacaaaacgtgttttttttttaatcactg  3751600         <---------TOE1(2)                                           --------->ANAC58      <---------ANAC46                                               --------->ANAC58      <---------ANAC58         <----------DOF2                       <---------TOE2(3)      <---------ANAC58   <---------ARR11(3)                       *TSS        <----------ID1 ---------->CBF          --------->ARR11(3)                ----------->GT1  <---------------AtSPL8 ------RAV1(1)       ---------->DOF2                  <---------ANAC58     --------->DAG2 --At5g28300     ---------->DOF2   ---------->DOF2    <---------ANAC58    ---------->DOF2   ---------   tggcaatttcgtagtttgataaagaaaggtcttctttaaaagcagggcgagagaatgagtgtcgaaaaatcaaggaaaaagggacaaacttcagaaaagc  3751700                                ------>NtERF2                                <---------SPL7                               --------->RAP2.6(2)                              --------->ATERF1(1)                             <---------ATERF1(1)                          --------->At4g35610                          <---------HSFB2a(1)                          --------->ZAT2                          --------->HSFC1(2)                          <---------At4g35610              <---------LBD16                          --------->HSFB2a(1)         --------->ARR11(3)              <---------HSFB2a(1)<---------ALFIN1     <---------ARR11(3)     --------->GLK1(2)     ------>ZmHOX2a(2)    <---------ZAT2     <----------DOF2  <---------At4g35610    <------ZmHOX2a(2)     <---------HSFC1(2)------>ZmHOX2a(2)<---------RAP2.3(1)   --------->ARR14(2) --------->ANAC46 <------ZmHOX2a(2)------>ZmHOX2a(2)    --------->ARR11(3)   ------->TEIL<---------ICU4--------->At4g35610    ----------->ARR10        <---------ARR11(3)   <---------ARR14(2)<---------HSFB2a(2)  --------->ARR11(3)<---------RAP2.6(2) ->DOF2     <---------GLK1(2)------>NtERF2<---------ARR11(3)<---------ANAC46<---------GLK1(2)       <   ttatggatccgatggaatctttgcccgaagctgccgcacagatcgatctttgggatgatcttgcggcttcccttgtcaaaatctcggtaagcgcatgatg  3751800                                               >>>>>>>>>MYB98                                              ------>MYB83                                  --------->TOE1(2)<---------ARR11(3)                   <---------GLK1(1)          ------>MYB46(1)          <-----------HVH21    --------->ARR14(2)  --------->ARR11(3)       <---------AHL20(2)<------          <-----------TGA1     <---------ARR14(2)  <-----------ARR10  <---------ANAC46   ------->MYC3      <---------GLK1(1)    ------>ZmHOX2a(2)  --------->MYB52(1)   <---------TOE2(3)     <-------MYC3 ---------ANAC46   --------->GLK1(1)        <---------MYB59   <----------DOF2      <---------GLK1(1)<   cgatgtggaattcgtcactggatttctgatctaaatccgacgataacctaacaaatctttccttcttttgtggtttgtttaatagaaatcacatgccttt  3751900           <---------At4g35610        --------->At4g35610        <---------At4g35610      <------ZmHOX2a(1)                                              <---------ANAC58   <------NtERF2                                             <---------ARR11(3)  --------->LBD16                                            --------->ARR11(3) <---------ANAC46                                       <---------ZAT18                           <-- ----DOF2  --------->At4g35610                          --------->ZAT14                --------->GLK1(1) ---------LBD16          ---------->ID1            ------>ZmHOX2a(1) <---------ANAC58  <---------GLK1(1)   gtgccggaggagcagctattgaaatttgtcgattaccttgagataaaactttcctctgtgcaatatctatggctggacatgttcaaagggtctccttgcc  3752000             --------->ATHB12                       --------->ANAC46            <---------YAB1                 --------->ARR14(2)          --------->CCA1(2)                <---------ARR14(2)         --------->ARR11(1)                ------->TEIL<---------ALFIN1      <---------WOX13(1)                  <---------CCA1(2) --------->ZAT2             <---------ARR11(3)      --------->ANAC58   <---------ANAC58 <---------ZAT2   <---------TOE2(3)     ------>ZmHOX2a(1)--------->bZIP60(2) <---------At4g35610      <---------MYB52(1)     <---------ETT(2)      <---------ANAC58 -------ALFIN1 <---------WOX13(1) <----------TaMYB80--------->ANAC58--------->ALFIN1      -----------   ccaagctgatagatatgattgatgttccattatctcatattcctgtatctgtctacgacacatcagtcgagtggctcgacaaattttctattgggttact  3752100                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                          <---------SPL7     --------                                                                        --------------->AtSPL3    <--                                                              <-----------HVH21              --------                  <-------GAMYB                              <------MYB46(1)                 --------                 <---------MYB46(3)                          <------MYB83<---------ANAC46    --------             --------->ALFIN1                  --------->AtMYB61      ----------->HVH21      <-------             <---------AtMYB61                <---------MYB55(2)      --------->DEAR3(1)     --------            <---------ZAT18                   --------->MYB46(3)  --------->At4g35610      <---------            --------->ZAT14       <---------TOE1(2)  ----------->RAV1(1)--------------->AtSPL8    <--    <----------DOF2           --------->At4g35610 <---------ALFIN1<---------At4g35610  <<<<<<<<<CBP60g >GT1      <---------ANAC46   <---------At4g35610 --------->AtMYB61 --------->ANAC46   <<<<<<<<<SARD1   ctgtgcctttgtagtgtggtcgttgaatcgtcttctcacgattttggaaccaccacaacagggaggtcaccagcgacgtactacttccaaatttcacgta  3752200  Previous    Next  AGI:  At3g11880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42317.1); contains domain PTHR13448 (PTHR13448) Range:  from: 3751666    to: 3754066    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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