Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ANAC46                                                  <---------At5g28300                                               <-----------HVH21                                           <---------ARR11(3)                                         --------->ANAC58                                         --------->ANAC58                                 --------->ANAC46        <---------YAB1               <---------ARR11(3)    <---------ZAT14              <---------ALFIN1 ------>WOX13(1)       --------->LBD16<------ZmHOX2a(2)    --------->ZAT14         --------->LBD16 --WOX13(1)   ---------->DOF2        --------->ARR11(3) --------->At4g35610      ----------->RAV1(2)   caatctcgttctgaataaaagcctccgtagtatgggctagatcaagacatttcacggccactgaacttcttcgtccataaacaccctgaaacacctcata  3748700                                                <-----------GT1                                           <---------YAB1                                       <----                                          ------>MYB83<---------DAG2<---------ANAC58     --------->GLK1(1)                                        --------->TOE1(2)   --------->LBD16          --------->ANAC46                                     ------->GAMYB--------->MYB46(3)<---------ANAC58 --------->ANAC55(2)                        --------->MYB52(2)------>MYB46(1)  <---------LBD16          <---------At5g28300                     --------->TOE2(3)  --------->TOE2(2)  <-----------RAV1(2)      <---------LBD16              <---------AHL20(2)    --------->MYB46(3)<----------DOF2              <-----------GT1  -             <-----------GT1        <---------MYB111(2)   <---------LBD16   ---------->ID1   >>>>>>>ZML2   gccatttcttccatatttcatttcattagttgatactaacaacctacgattaaccactttcccaggggtttcgttctcgtcgtatttacggagttctagt  3748800                                                                                                  ---                                                                                                  ===                                                                                            =========               <---------DOF5.7(2)                                                          =========            --------->ANAC55(1)                                                        ==============     <---------------AGL15                                                             ==============    <-----------------AGL1                                                             ------>ZmHOX2a(1) -----ZAT6  --------->ANAC46                                                  ---------->ID1------>ZmHOX2a(1) ---------->GT1--------->MYB52(1)     ----------->HVH21           <------------------------ANAC81 ===   gatggtaacattacaggtaacgtcttgtttatattctggtctgaaggaactgataagacttttgactctgaatttgttttctcgttttcctctcctaatc  3748900          ----------->HVH21         ------>ZmHOX2a(2)        <------ZmHOX2a(2)        <---------At4g35610        --------->At4g35610       <---------ARR14(2)       <---------AGP1       <-----------ARR10       --------->ARR11(3)       <---------ARR11(3)       --------->ARR14(2)       --------->GLK1(2)      <------ZmHOX2a(1)                             ------>ZmHOX2a(1) --->ZmHOX2a(1)        -------->P                 ----------->RAV1(2) ==============HOX2a_HOX2a                     ------>ZmHOX2a(1)       --------->At4g35610 ==============HOX2a_HOX2a                  ------>MYB83               <---------At4g35610 ===============HOX2a_HOX2a                 ------>MYB46(1)            --------->ZAT2 ===============HOX2a_HOX2a            <-----------GT1  <---------At4g35610       <-----------GT1 ==============HOX2a_HOX2a          <---------------AtSPL8           <------ZmHOX2a(1) ===============HOX2a_HOX2a         --------------->AtSPL8       <---------O2    <-----------GT1    <   ctccactaggatctgacttcttctctacctgctcatttttagtaccatcctctcctgatgctgagacacgaggagctgaatttttatctctcttcttctc  3749000                                                --------->ANAC46                                         XXXXXXXXXXXXXXXXXXXXX>MIR850          --------->AtLEC2          <---------LBD16                                        ------->GAMYB          ------>MYB46(1)           <-----------RAV1(2)                                 --------->YAB1          ------>MYB83  <----------DOF2<------ZmHOX2a(1)                               <---------ATHB12 -----------GT1  --------->TOE2(3)--------->TOE2(3)--------->AtMYB61          --------->CCA1(2)  ----   atttacaataccatccaaacctttgtctttcgaaaacctcaggaagacacagaccacaacaacaagaagacccacaagagagatggccaataaccacatt  3749100                                                                             --------->ICU4                                                                           ----------->GT1                                                                         <---------ZAT14           --              <------MYB46(1)                   <---------GLK1(2)        --------->ZAT14        <----       ---------->DOF2                        <---------AHL20(2)<---------MYB46(3)       ----------->HVH21 ----->YAB1   <------MYB83             <-----------GT1        <---------MYB52(1)        <-----------HVH21   gatgaaaaaaaaagcttggtctcttgaagaatacaaagtttttgctatttgattctcttgctctgtttgttcttgtgtagtgatttatgctgtgaccccc  3749200                                                 --------->TOE2(3)                                <--                                                --------->ANAC46             --------->ANAC58     ---                                                --------->ANAC55(2)          --------->ANAC58    <---                                            <----------DOF2                <---------ALFIN1      ----                                            <---------DAG2             ------->GAMYB             <---                                           --------->TOE2(3)          --------->ANAC46           ----                  <---------At4g35610    <-----------GT1             ------>MYB46(1)             ----                  --------->At4g35610<----------DOF2                 ------>MYB83                <---      <---------YAB1          --------->ZAT14   <---------ANAC55(2)  -------->P      <---------ARR11(3)     <-----------TBP          <---------ZAT14<---------MYB52(1)   --------->MYB46(3) --------->ARR11(3) ------------------->WRI1<---------ZAT14 ---------->ID1--------->ARR11(3) <---------REM1(2)    <----- -----ALFIN1      --------->CCA1(2)  <---------DAG2    <---------ARR11(3)<---------ALFIN1 --------->ATHB12   tctctgtttttatagccgagagatgacttctctgctctgctttttcctttacgtcaacatcttcttcatccaaccccacacgcttaagagcttgatttat  3749300 -------------AGL15 ------------>AGL15 --------------AG ------------->AG                                            <---------WOX13(1) --------------AGL3                                         <------------CBF        ------->TEIL ------------->AGL3                                        --------->ATHB12      <---------ANAC46 ------------->AGL2                                       <---------YAB1       <---------ANAC46 --------------AGL2         <-----------HVH21      <----------DOF2       <------ZmHOX2a(1) ------GT1    <----------DOF2    --------->AtMYB61 <---------DAG2     <------ZmHOX2a(1)   ccatttttggatagagcttttgcagttttctgtcaccatcacattcgctctagctttttgttgattgagtaaggaggagtcttgtgtatgtggaacgatt  3749400                                                           <---------TOE2(3)            --------------->AGL15                     <-------MYC3                                  <            <---------------AGL15                     ------->MYC3                              <----         <-----------GT1                        <---------ZAT18                                 <----     <---------YAB1                      <---------HSFB2a(2)                                <--------   --------->AHL20(2)              ----------->GT1 <---------ALFIN1                         <--------   <---------AHL20(2)    --------->CCA1(2)      --------->ZAT18                --------->AHL20(2)  <-   --------->ATHB51   <---------KAN4(2)  --------->HSFB2a(2)                   <---------AHL20(2)<---   tagaattatttttactatacaaagaatatacaagaagtggtttctagtagcacacacgtttaagaattcaaatccaactaattttttggttttagcttgc  3749500     ---------->ID1 <-------GAMYB <---------ANAC58 <---------ANAC58 ---------MYB46(3)                            <-----------RAV1(1) -----ANAC58        --------->ATHB12         ------->TEIL -----ANAC58       <---------YAB1       <---------ANAC46 -ANAC58<----------DOF2           ==========================HOX2a_HOX2a -ANAC58------>ZmHOX2a(1)      <------ZmHOX2a(1)                    <----------DOF2    ----------->GT1 --------AtMYB61 <---------ZAT18  <------ZmHOX2a(1)  <------ZmHOX2a(2)          --------->LBD16    <- -------DOF2    <---------ZAT6 =============================HOX2a_HOX2a<-----------GT1 <---------ZAT6   tttggttgtccttttctagtgctcattgagtaaggaggagtcatgtgtatgtgggatcaatttagaaatacttttactaatccgagttagagtgaaatga  3749600  Previous    Next  AGI:  At3g11870.1    Description:  protein kinase-related. similar to IRE1A (Yeast endoribonuclease/protein kinase IRE1-like gene), kinase [Arabidopsis thaliana] (TAIR:AT2G17520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71705.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Ribonuclease L; (InterPro:IPR010513); contains InterPro domain PUG (InterPro:IPR006567) Range:  from: 3747004    to: 3749099    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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