Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------MYB52(1)                                                                            --------->LBD16                                                                          <---------LBD16                                                                        --------->ARR14(2)       <---------ANAC46                                                 <---------ARR14(2)     <---------ANAC46      <-----------------AGL2                      <---------ZAT2 --------->GLK1(2) ------>GAMYB              <-----------------AGL3                      --------->At4g35610 ------->ZAT6         <-------TEIL                                     --------->ZAT2<---------GLK1(2) ----->MYB52(1)  <-----------GT1            <------ZmHOX2a(1)          <---------At4g35610          - -WOX13(1)----------->GT1  <-----------------AGL1                 <---------SPL7  --------->HSFB2a(2)   aacagtctcgcgtagtaattcacattcgttctcaatttggactctaggattagagaacatgtctaggtcgtccagctccggtatcgagaatcgtttctcg  3741000                                              <-----------RAV1(2)                               -----                                    --------->ARR14(2)                         --------->ANAC58 <----                                    <---------ARR14(2)                         --------->ANAC58 -----          <---------ANAC58      =============================HOX2a_HOX2a       --------->RAP2.6(2)---          <---------ANAC58      <------ZmHOX2a(2)     <------ZmHOX2a(1) --------->MYB46(3)  ------>ZmHOX2a(2) ---------->GT1          <---------REM1(2)  ------->TEIL       --------->MYB46(3) ----------->RAV1(1)   gtctgtaattcgtcgtgtcttctcttcttcacagatcgaatccatgaaccaggggaggaagaacaacaatcgcatccacagtcgcaacatttgatcggag  3741100                                  ------->GAMYB                                  ----------->RAV1(1)                                 --------->MYB46(3)                                 <---------MYB55(2)                                ------>MYB46(1)                                ------>MYB83                                -------->P                               --------->MYB55(1)                              --------->AtMYB61                              <---------MYB111(2)                              <---------MYB46(2)                              <---------MYB55(2)                              <---------MYB111(1)                              --------->MYB46(3)                              --------->DEAR3(1)                           --------->ANAC46                           --------->ANAC58                           --------->ANAC58                         <---------ALFIN1                        ------>ZmHOX2a(1)                  --------->GLK1(2)        --------->AHL20(2)                              -------->P ---->HSFB2a(1)  <---------ARR11(3) --------->ANAC46          <---------ICU4         --------->ZAT18 -----HSFB2a(1)  <---------GLK1(2)--------->AtMYB61      ----------->GT1        ---------->DOF2 ---->HSFC1(2)   <---------ARR14(2) --------->ANAC58 --------->GLK1(2)        <---------MYB59       < ------>GLK1(2)  --------->ARR14(2) --------->ANAC58<---------GLK1(2) <------ZmHOX2a(1) <---------MYB52(2)   attccattcccaattccaagattctcctcacaccaaccacacaaattatacagagaatcgcgaaaaattacaggaagagacctaaatcgcactaacccct  3741200                                                        <---------------------WRI1                                                        --------->At4g35610               <---------LBD16                --------->ANAC58         <---------At4g35610                  --------->ANAC58         <---------HSFB2a(1)             --------->At4g35610         --------->HSFB2a(1)             <---------ZAT2 <---------LBD16         --------->HSFC1(2)              ----------->RAV1(2)         ----------->GT1    <---------ARR14(2)         <---------HSFC1(2)              <---------At4g35610<---------ARR14(2)          --------->GLK1(2)   --------->At4g35610                   --------->ZAT2 <---------At4g35610             --------->ARR14(2) --------->ATHB12 <------ZmHOX2a(1)    <-----------RAV1(2)--------->LBD16              <---------GLK1(2) ---------ATHB12 ----------->GT1 --------->AHL20(2) --------->ARR14(2)--------->At5g28300      <-----   aaatcatcggaagcttctcaggaaaaaaaaaaaaaaaaaatccagctgaagccaattctgcggaaacaacacagtaaaactcaatttcagaatctggatc  3741300                      --------->ANAC46                      --------->ANAC58                      --------->ANAC58                    ---------->DOF2          -------->P                   <---------ARR14(2)       <-----------GT1                   --------->ARR14(2)     <---------ANAC58                                    -------                 --------->LBD16          <---------ANAC58                                 --------->ANAC46             --------->GLK1(2)        --------->TOE2(3)                                    --------->ANAC58             --------->ARR14(2)       <---------MYB59       --------->LBD16             <---------WRKY12 -ZmHOX2a(2) <---------ARR14(2)    <-----------GT1     ------>NtERF2      --------->GLK1(2)--------->ANAC58   aagagagaaaacaaaaatccgaaaacgcaaattgatgaaaccttacttaccccttggcgacccagaaattggagagaattttgtctcccgtccacgaaac  3741400                                                                                 <------------CBF                                                                         <---------HSFC1(2)                                                                         <---------HSFB2a(1)                                                                         --------->HSFB2a(1)                                                                    <---------TOE1(3)                                                            --------->DAG2   --------->ANAC55(2)                                                          ---------->DOF2--------->HSFC1(2)                              <---------ANAC46      <------ZmHOX2a(1) <------ZmHOX2a(1)                              <---------ANAC55(2)  <----------ID1   <---------TOE2(3)         *TSS                 --------->ANAC55(2)<---------------AtSPL8 <---------KAN4(2) -->MYB52(1)          <-----------GT1         ---------->DOF2----------->GT1 --------->YAB1   agagaaacagaacgagaaacgttttttctatcgcgtaaacaaacaaaaaaaagaggacaaaaaaggtattaaggaattttcgtaattgtagagaatgaat  3741500                                                          --------->GLK1(2)                                                          <---------ARR11(3)                              <---------ICU4              --------->ARR11(3)      <---------AHL20(2)                             <---------YAB1              --------->RVE1(1)       <---------YAB1                          <---------YAB1           --------->TOE2(3)    <---------At4g35610                    <---------TOE2(3)              --------->TOE1(3)    --------->At4g35610        --            ----------->GT1--------->YAB1       <---------GLK1(1)       ----------->RAV1(2)       <-- <------------CBF ---------->DOF2               --------->GLK1(1)<---------AHL20(2)   <---------AHL20(2)   tcaaattgtatgtattgaaaaaaaggttttgataattgtttgatttttggaaaccctaaaaatctgttttattcatctggatttttatttttttttgtct  3741600                                                                           <---------MYB46(3)                                                                         <-------GAMYB                                                                        <---------MYB46(3)                                                                     --------->YAB1                                                                 --------->LBD16         <---------YAB1                 <---------ARR14(2)                             <---------HSFB2a(2)    <-------------                 <---------GLK1(2)                         ------>ZmHOX2a(1)   >>>>>>>GRF7          <------ZmHOX2a(1)                              ----------->RAV1(2)<-----------HVH21   --------->MYB52(1)<---------YAB1                  <-----------HVH21 <---------YAB1  -------------- ------->YAB1    --------->ARR14(2)              --------->GLK1(2)  <---------ATHB12  <-------------- -------YAB1    <------ZmHOX2a(1)          <-----------HVH21    --------->HSFB2a(2)   <--------------   ataataaacggaggagaaggattctcatggagtctctcttctgtctgtcagactctgtctcctgttcccgatgatggttgtcagggagactatttttggt  3741700                                                                               <-----------HVH21                                                                            <---------bZIP60(2)                                                                            --------->At4g35610                        --------->ANAC58                                    <---------ANAC46                        --------->ANAC58                                    <---------ANAC58                ------>ZmHOX2a(1)                                           <---------ANAC58                <---------YAB1                                    --------->ATHB12             <------ZmHOX2a(2)                        --------->MYB46(3)    <---------At4g35610      <------ZmHOX2a(1)------->TEIL                 --------->MYB52(1)    <---------ZAT14      ==============HOX2a_HOX2a                   <------ZmHOX2a(2)    <---------ANAC58 --AGL15    --------->ARR11(3)                   <---------ARR11(3)    <---------ANAC46          ---- ->AGL15    <---------ARR14(2)                   --------->ARR11(3)    <---------ANAC58          ---- ---AGL2    --------->ARR14(2)    <---------TOE2(3)<---------WRKY12 <---------WOX13(1)         ------ ---AGL3  ----------->ARR10  --------->ICU4  ---------->DOF2     <---------AHL20(2)            ------   ataaacgaggagacgatcctgaatgaacgtcaagatgaggtattggctaaagatcaacggctgatatttgattgagtgaggtgtcataagtcaataacct  3741800                       --------->TOE2(3)                <------NtERF2                          --------->ATHB51               ------>NtERF2                        --------->YAB1              <---------ATERF1(2)                  <-------TEIL              <---------RAP2.3(3)              <---------TOE1(2)        <-------TEIL<---------WRKY18(1)      <---------LBD16   ---------->DOF2 ----------->HVH21      <---------ARR11(3)                      <---------ARR14(2) -->MYB46(1)  <---------RAP2.6(2)         --------->ARR11(3)                      --------->ARR14(2) -->MYB83     <---------RAP2.3(2)        --------->CCA1(1)                       <---------CCA1(2) --->TOE2(2)  --------->ATERF1(2)        --------->RVE1(1)                       --------->GLK1(1) --->TOE1(2) --------->RAP2.6(3)     --------->AHL20(2)<---------ICU4<----------DOF2         --------   acgaacaaagtacatggcggcatgacctcaaaaatcaaaaaaaatatctcgggttcataatttcaaatgttcttttaaggcccatatccaatagaccaat  3741900  Previous    Next  AGI:  At3g11850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39886.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) Range:  from: 3738903    to: 3741409    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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